Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 Y_RNA.535-201ENST00000384612 99 ntBASIC0.16□□□□□ -2.38
CSNK1A1P48729 AL606845.1-201ENST00000404881 255 ntBASIC0.16□□□□□ -2.38
CSNK1A1P48729 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.16□□□□□ -2.38
CSNK1A1P48729 MTND4LP11-201ENST00000422184 280 ntBASIC0.16□□□□□ -2.38
CSNK1A1P48729 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.16□□□□□ -2.38
CSNK1A1P48729 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
CSNK1A1P48729 Y_RNA.355-201ENST00000365462 98 ntBASIC0.15□□□□□ -2.39
CSNK1A1P48729 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
CSNK1A1P48729 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.15□□□□□ -2.39
CSNK1A1P48729 SNORD93-201ENST00000408813 74 ntBASIC0.15□□□□□ -2.39
CSNK1A1P48729 Y_RNA.617-201ENST00000410920 90 ntBASIC0.15□□□□□ -2.39
CSNK1A1P48729 SNORD71-201ENST00000411292 86 ntBASIC0.15□□□□□ -2.39
CSNK1A1P48729 SNORD2.1-201ENST00000458762 69 ntBASIC0.15□□□□□ -2.39
CSNK1A1P48729 RNU6-570P-201ENST00000517051 105 ntBASIC0.15□□□□□ -2.39
CSNK1A1P48729 AC133485.4-201ENST00000561835 220 ntBASIC0.15□□□□□ -2.39
CSNK1A1P48729 MIR302B-201ENST00000362188 73 ntBASIC0.14□□□□□ -2.39
CSNK1A1P48729 Y_RNA.42-201ENST00000362660 108 ntBASIC0.14□□□□□ -2.39
CSNK1A1P48729 Y_RNA.44-201ENST00000362676 108 ntBASIC0.14□□□□□ -2.39
CSNK1A1P48729 Y_RNA.61-201ENST00000362835 102 ntBASIC0.14□□□□□ -2.39
CSNK1A1P48729 RNU6-815P-201ENST00000384080 113 ntBASIC0.14□□□□□ -2.39
CSNK1A1P48729 Y_RNA.508-201ENST00000384502 114 ntBASIC0.14□□□□□ -2.39
CSNK1A1P48729 Y_RNA.567-201ENST00000384736 106 ntBASIC0.14□□□□□ -2.39
CSNK1A1P48729 MIR616-201ENST00000385293 97 ntBASIC0.14□□□□□ -2.39
CSNK1A1P48729 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
CSNK1A1P48729 RNU4-83P-201ENST00000410863 133 ntBASIC0.14□□□□□ -2.39
CSNK1A1P48729 RNU6-561P-201ENST00000516222 102 ntBASIC0.14□□□□□ -2.39
CSNK1A1P48729 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.14□□□□□ -2.39
CSNK1A1P48729 AL662814.1-201ENST00000617364 121 ntBASIC0.14□□□□□ -2.39
CSNK1A1P48729 RNU6-653P-201ENST00000363074 106 ntBASIC0.13□□□□□ -2.39
CSNK1A1P48729 RNA5SP62-201ENST00000363457 110 ntBASIC0.13□□□□□ -2.39
CSNK1A1P48729 Y_RNA.199-201ENST00000364014 102 ntBASIC0.13□□□□□ -2.39
CSNK1A1P48729 Y_RNA.430-201ENST00000384081 110 ntBASIC0.13□□□□□ -2.39
CSNK1A1P48729 MIR644A-201ENST00000385262 94 ntBASIC0.13□□□□□ -2.39
CSNK1A1P48729 RNU6-985P-201ENST00000410182 104 ntBASIC0.13□□□□□ -2.39
CSNK1A1P48729 AC096949.1-201ENST00000412047 152 ntBASIC0.13□□□□□ -2.39
CSNK1A1P48729 AC113618.1-201ENST00000416747 285 ntBASIC0.13□□□□□ -2.39
CSNK1A1P48729 MIR3129-201ENST00000581095 76 ntBASIC0.13□□□□□ -2.39
CSNK1A1P48729 uc_338.16-201ENST00000621804 95 ntBASIC0.13□□□□□ -2.39
CSNK1A1P48729 MIR924-201ENST00000638017 53 ntBASIC0.13□□□□□ -2.39
CSNK1A1P48729 Y_RNA.82-201ENST00000363000 102 ntBASIC0.12□□□□□ -2.39
CSNK1A1P48729 Y_RNA.92-201ENST00000363043 102 ntBASIC0.12□□□□□ -2.39
CSNK1A1P48729 Y_RNA.235-201ENST00000364412 102 ntBASIC0.12□□□□□ -2.39
CSNK1A1P48729 Y_RNA.237-201ENST00000364439 102 ntBASIC0.12□□□□□ -2.39
CSNK1A1P48729 Y_RNA.306-201ENST00000365015 102 ntBASIC0.12□□□□□ -2.39
CSNK1A1P48729 Y_RNA.312-201ENST00000365089 102 ntBASIC0.12□□□□□ -2.39
CSNK1A1P48729 Y_RNA.322-201ENST00000365151 102 ntBASIC0.12□□□□□ -2.39
CSNK1A1P48729 U8.15-201ENST00000390947 134 ntBASIC0.12□□□□□ -2.39
CSNK1A1P48729 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.12□□□□□ -2.39
CSNK1A1P48729 Y_RNA.650-201ENST00000459002 102 ntBASIC0.12□□□□□ -2.39
CSNK1A1P48729 Y_RNA.777-201ENST00000516982 102 ntBASIC0.12□□□□□ -2.39
CSNK1A1P48729 MIR5197-201ENST00000583721 112 ntBASIC0.12□□□□□ -2.39
CSNK1A1P48729 Y_RNA.771-201ENST00000598668 102 ntBASIC0.12□□□□□ -2.39
CSNK1A1P48729 Y_RNA.789-201ENST00000622480 102 ntBASIC0.12□□□□□ -2.39
CSNK1A1P48729 AC091932.4-201ENST00000623386 200 ntBASIC0.12□□□□□ -2.39
CSNK1A1P48729 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.12□□□□□ -2.39
CSNK1A1P48729 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.12□□□□□ -2.39
CSNK1A1P48729 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
CSNK1A1P48729 Y_RNA.13-201ENST00000362403 112 ntBASIC0.11□□□□□ -2.39
CSNK1A1P48729 RNU6-867P-201ENST00000364956 107 ntBASIC0.11□□□□□ -2.39
CSNK1A1P48729 Y_RNA.542-201ENST00000384641 111 ntBASIC0.11□□□□□ -2.39
CSNK1A1P48729 Y_RNA.588-201ENST00000391254 102 ntBASIC0.11□□□□□ -2.39
CSNK1A1P48729 RNA5SP261-201ENST00000410536 106 ntBASIC0.11□□□□□ -2.39
CSNK1A1P48729 Y_RNA.618-201ENST00000410949 107 ntBASIC0.11□□□□□ -2.39
CSNK1A1P48729 RNU7-80P-201ENST00000459562 61 ntBASIC0.11□□□□□ -2.39
CSNK1A1P48729 AL365265.1-201ENST00000621045 234 ntBASIC0.11□□□□□ -2.39
CSNK1A1P48729 AL596211.1-201ENST00000569873 2277 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 Y_RNA.202-201ENST00000364083 110 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 RNU6-1109P-201ENST00000391187 107 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 RNU6-381P-201ENST00000391259 108 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 RNA5SP237-201ENST00000410414 113 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 TRBVB-201ENST00000477100 408 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 AC069113.3-201ENST00000521019 150 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 AP003327.1-201ENST00000529684 127 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 AL442663.2-201ENST00000554385 511 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 AC141846.1-201ENST00000568348 142 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 AP001094.1-201ENST00000579805 193 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 MIR4282-201ENST00000583613 67 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 MIR6082-201ENST00000613604 109 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 MIR6755-201ENST00000619993 66 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 PVT1_3.1-201ENST00000620853 95 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 AC010487.4-201ENST00000637027 61 ntBASIC0.1□□□□□ -2.39
CSNK1A1P48729 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
CSNK1A1P48729 RNU6-403P-201ENST00000363163 104 ntBASIC0.09□□□□□ -2.4
CSNK1A1P48729 RNU6-1292P-201ENST00000383856 107 ntBASIC0.09□□□□□ -2.4
CSNK1A1P48729 Y_RNA.512-201ENST00000384518 102 ntBASIC0.09□□□□□ -2.4
CSNK1A1P48729 AL512326.2-201ENST00000426359 151 ntBASIC0.09□□□□□ -2.4
CSNK1A1P48729 AC073261.1-201ENST00000429409 121 ntBASIC0.09□□□□□ -2.4
CSNK1A1P48729 MTCYBP6-201ENST00000441810 138 ntBASIC0.09□□□□□ -2.4
CSNK1A1P48729 MIR3152-201ENST00000579801 74 ntBASIC0.09□□□□□ -2.4
CSNK1A1P48729 MIR4491-201ENST00000581087 68 ntBASIC0.09□□□□□ -2.4
CSNK1A1P48729 U2.14-201ENST00000615943 113 ntBASIC0.09□□□□□ -2.4
CSNK1A1P48729 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.09□□□□□ -2.4
CSNK1A1P48729 MIR6841-201ENST00000637129 72 ntBASIC0.09□□□□□ -2.4
CSNK1A1P48729 Y_RNA.32-201ENST00000362589 110 ntBASIC0.08□□□□□ -2.4
CSNK1A1P48729 Y_RNA.176-201ENST00000363815 109 ntBASIC0.08□□□□□ -2.4
CSNK1A1P48729 SNORA33.2-201ENST00000365413 134 ntBASIC0.08□□□□□ -2.4
CSNK1A1P48729 Y_RNA.416-201ENST00000384014 113 ntBASIC0.08□□□□□ -2.4
CSNK1A1P48729 Y_RNA.454-201ENST00000384224 113 ntBASIC0.08□□□□□ -2.4
CSNK1A1P48729 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms