Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC244636.1-201ENST00000421152 228 ntBASIC1.06□□□□□ -2.24
ATRXP46100 MIR6740-201ENST00000618268 113 ntBASIC1.06□□□□□ -2.24
ATRXP46100 MIR376A2-201ENST00000636782 80 ntBASIC1.06□□□□□ -2.24
ATRXP46100 Y_RNA.66-201ENST00000362862 102 ntBASIC1.05□□□□□ -2.24
ATRXP46100 snoU2_19.4-201ENST00000364329 80 ntBASIC1.05□□□□□ -2.24
ATRXP46100 SNORA1.1-201ENST00000364671 133 ntBASIC1.05□□□□□ -2.24
ATRXP46100 MIR520A-201ENST00000384862 85 ntBASIC1.05□□□□□ -2.24
ATRXP46100 MIR548O-201ENST00000408583 114 ntBASIC1.05□□□□□ -2.24
ATRXP46100 MTND5P18-201ENST00000445624 1801 ntBASIC1.05□□□□□ -2.24
ATRXP46100 Y_RNA.651-201ENST00000459380 103 ntBASIC1.05□□□□□ -2.24
ATRXP46100 Y_RNA.714-201ENST00000517065 90 ntBASIC1.05□□□□□ -2.24
ATRXP46100 MIR4662B-201ENST00000579498 81 ntBASIC1.05□□□□□ -2.24
ATRXP46100 RNA5SP276-201ENST00000362580 94 ntBASIC1.05□□□□□ -2.24
ATRXP46100 SNORD114-15-201ENST00000364687 72 ntBASIC1.05□□□□□ -2.24
ATRXP46100 RNU6-1056P-201ENST00000383996 107 ntBASIC1.05□□□□□ -2.24
ATRXP46100 RNU6-950P-201ENST00000384651 107 ntBASIC1.05□□□□□ -2.24
ATRXP46100 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
ATRXP46100 Y_RNA.586-201ENST00000391146 98 ntBASIC1.05□□□□□ -2.24
ATRXP46100 Y_RNA.610-201ENST00000410681 103 ntBASIC1.05□□□□□ -2.24
ATRXP46100 AC006461.1-201ENST00000412637 326 ntBASIC1.05□□□□□ -2.24
ATRXP46100 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.05□□□□□ -2.24
ATRXP46100 RNU6-504P-201ENST00000516568 104 ntBASIC1.05□□□□□ -2.24
ATRXP46100 RNA5SP364-201ENST00000516938 78 ntBASIC1.05□□□□□ -2.24
ATRXP46100 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.05□□□□□ -2.24
ATRXP46100 MIR4764-201ENST00000580680 88 ntBASIC1.05□□□□□ -2.24
ATRXP46100 AC134878.1-201ENST00000619901 243 ntBASIC1.05□□□□□ -2.24
ATRXP46100 RNU6-704P-201ENST00000364162 103 ntBASIC1.04□□□□□ -2.24
ATRXP46100 RNU11-5P-201ENST00000391216 129 ntBASIC1.04□□□□□ -2.24
ATRXP46100 AL035398.1-201ENST00000430869 322 ntBASIC1.04□□□□□ -2.24
ATRXP46100 RNA5SP57-201ENST00000459463 123 ntBASIC1.04□□□□□ -2.24
ATRXP46100 Y_RNA.677-201ENST00000516401 85 ntBASIC1.04□□□□□ -2.24
ATRXP46100 RNU6-165P-201ENST00000517170 99 ntBASIC1.04□□□□□ -2.24
ATRXP46100 MIR548AR-201ENST00000582191 57 ntBASIC1.04□□□□□ -2.24
ATRXP46100 HSPE1P19-201ENST00000603327 295 ntBASIC1.04□□□□□ -2.24
ATRXP46100 AL022345.2-201ENST00000606307 135 ntBASIC1.04□□□□□ -2.24
ATRXP46100 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.04□□□□□ -2.24
ATRXP46100 AL137067.1-201ENST00000615933 120 ntBASIC1.04□□□□□ -2.24
ATRXP46100 SNORA1.2-201ENST00000365189 134 ntBASIC1.04□□□□□ -2.24
ATRXP46100 SNORA1-201ENST00000384107 130 ntBASIC1.04□□□□□ -2.24
ATRXP46100 MIR520C-201ENST00000385005 87 ntBASIC1.04□□□□□ -2.24
ATRXP46100 MIR569-201ENST00000385228 96 ntBASIC1.04□□□□□ -2.24
ATRXP46100 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
ATRXP46100 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.04□□□□□ -2.24
ATRXP46100 MIR1270-201ENST00000459320 83 ntBASIC1.04□□□□□ -2.24
ATRXP46100 AC005908.1-201ENST00000468701 347 ntBASIC1.04□□□□□ -2.24
ATRXP46100 RNA5SP137-201ENST00000516833 135 ntBASIC1.04□□□□□ -2.24
ATRXP46100 SNORA74.3-201ENST00000517108 154 ntBASIC1.04□□□□□ -2.24
ATRXP46100 MIR4711-201ENST00000578274 70 ntBASIC1.04□□□□□ -2.24
ATRXP46100 U4atac.1-201ENST00000618345 95 ntBASIC1.04□□□□□ -2.24
ATRXP46100 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
ATRXP46100 RNU6-268P-201ENST00000364174 107 ntBASIC1.03□□□□□ -2.24
ATRXP46100 RNU4-16P-201ENST00000364737 141 ntBASIC1.03□□□□□ -2.24
ATRXP46100 SNORD113-1-201ENST00000365321 69 ntBASIC1.03□□□□□ -2.24
ATRXP46100 RNU7-113P-201ENST00000459273 62 ntBASIC1.03□□□□□ -2.24
ATRXP46100 MIR3152-201ENST00000579801 74 ntBASIC1.03□□□□□ -2.24
ATRXP46100 MIR4305-201ENST00000583252 102 ntBASIC1.03□□□□□ -2.24
ATRXP46100 AC025166.1-201ENST00000612411 163 ntBASIC1.03□□□□□ -2.24
ATRXP46100 MIR6129-201ENST00000616087 109 ntBASIC1.03□□□□□ -2.24
ATRXP46100 AL162726.3-218ENST00000636401 95 ntBASIC1.03□□□□□ -2.24
ATRXP46100 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
ATRXP46100 Y_RNA.171-201ENST00000363760 102 ntBASIC1.03□□□□□ -2.25
ATRXP46100 RNU6-1107P-201ENST00000364817 104 ntBASIC1.03□□□□□ -2.25
ATRXP46100 RNU6-910P-201ENST00000390844 107 ntBASIC1.03□□□□□ -2.25
ATRXP46100 SNORA26.6-201ENST00000391256 115 ntBASIC1.03□□□□□ -2.25
ATRXP46100 RNU6-1190P-201ENST00000410811 104 ntBASIC1.03□□□□□ -2.25
ATRXP46100 RNA5SP100-201ENST00000410903 110 ntBASIC1.03□□□□□ -2.25
ATRXP46100 RNA5SP59-201ENST00000410922 110 ntBASIC1.03□□□□□ -2.25
ATRXP46100 AC023449.1-201ENST00000454464 154 ntBASIC1.03□□□□□ -2.25
ATRXP46100 snoU13.21-201ENST00000459368 105 ntBASIC1.03□□□□□ -2.25
ATRXP46100 RNU7-61P-201ENST00000515897 61 ntBASIC1.03□□□□□ -2.25
ATRXP46100 RNU6-919P-201ENST00000516731 104 ntBASIC1.03□□□□□ -2.25
ATRXP46100 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.03□□□□□ -2.25
ATRXP46100 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.03□□□□□ -2.25
ATRXP46100 AC090049.2-201ENST00000550377 109 ntBASIC1.03□□□□□ -2.25
ATRXP46100 MIR3646-201ENST00000578301 84 ntBASIC1.03□□□□□ -2.25
ATRXP46100 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.03□□□□□ -2.25
ATRXP46100 U1.36-201ENST00000620684 176 ntBASIC1.03□□□□□ -2.25
ATRXP46100 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.03□□□□□ -2.25
ATRXP46100 AL359851.1-201ENST00000569460 4997 ntBASIC1.02□□□□□ -2.25
ATRXP46100 U8.5-201ENST00000364528 136 ntBASIC1.02□□□□□ -2.25
ATRXP46100 SNORD115-35-201ENST00000365122 82 ntBASIC1.02□□□□□ -2.25
ATRXP46100 Y_RNA.344-201ENST00000365381 112 ntBASIC1.02□□□□□ -2.25
ATRXP46100 Y_RNA.348-201ENST00000365403 103 ntBASIC1.02□□□□□ -2.25
ATRXP46100 SNORD50.2-201ENST00000365465 70 ntBASIC1.02□□□□□ -2.25
ATRXP46100 Y_RNA.370-201ENST00000365589 108 ntBASIC1.02□□□□□ -2.25
ATRXP46100 Y_RNA.440-201ENST00000384120 114 ntBASIC1.02□□□□□ -2.25
ATRXP46100 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
ATRXP46100 SNORA75.5-201ENST00000391291 81 ntBASIC1.02□□□□□ -2.25
ATRXP46100 RNU2-70P-201ENST00000410718 179 ntBASIC1.02□□□□□ -2.25
ATRXP46100 MTATP6P21-201ENST00000440681 189 ntBASIC1.02□□□□□ -2.25
ATRXP46100 HMGN2P32-201ENST00000444648 269 ntBASIC1.02□□□□□ -2.25
ATRXP46100 SNORA31.17-201ENST00000516953 127 ntBASIC1.02□□□□□ -2.25
ATRXP46100 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.02□□□□□ -2.25
ATRXP46100 SNORA28-201ENST00000606769 126 ntBASIC1.02□□□□□ -2.25
ATRXP46100 MIR6717-201ENST00000622747 73 ntBASIC1.02□□□□□ -2.25
ATRXP46100 AC106754.2-201ENST00000623006 233 ntBASIC1.02□□□□□ -2.25
ATRXP46100 AC245060.5-201ENST00000610778 3293 ntBASIC1.02□□□□□ -2.25
ATRXP46100 SNORD115-28-201ENST00000363931 81 ntBASIC1.01□□□□□ -2.25
ATRXP46100 RNY1P5-201ENST00000383890 115 ntBASIC1.01□□□□□ -2.25
ATRXP46100 RNU6-440P-201ENST00000390882 105 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms