Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MIR7-2-201ENST00000384970 110 ntBASIC0.72□□□□□ -2.29
HADHAP40939 AC244098.3-201ENST00000424803 96 ntBASIC0.72□□□□□ -2.29
HADHAP40939 RNU4-71P-201ENST00000516258 113 ntBASIC0.72□□□□□ -2.29
HADHAP40939 SCARNA15.1-201ENST00000516384 125 ntBASIC0.72□□□□□ -2.29
HADHAP40939 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.72□□□□□ -2.29
HADHAP40939 MIR3152-201ENST00000579801 74 ntBASIC0.72□□□□□ -2.29
HADHAP40939 MIR3129-201ENST00000581095 76 ntBASIC0.72□□□□□ -2.29
HADHAP40939 AC062037.2-201ENST00000610137 73 ntBASIC0.72□□□□□ -2.29
HADHAP40939 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.72□□□□□ -2.29
HADHAP40939 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
HADHAP40939 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HADHAP40939 Y_RNA.540-201ENST00000384638 111 ntBASIC0.71□□□□□ -2.3
HADHAP40939 MT-TF-201ENST00000387314 71 ntBASIC0.71□□□□□ -2.3
HADHAP40939 AL138752.1-201ENST00000452964 351 ntBASIC0.71□□□□□ -2.3
HADHAP40939 AC133485.1-201ENST00000567176 124 ntBASIC0.71□□□□□ -2.3
HADHAP40939 AC138907.6-201ENST00000568401 126 ntBASIC0.71□□□□□ -2.3
HADHAP40939 MIR4771-2-201ENST00000577758 74 ntBASIC0.71□□□□□ -2.3
HADHAP40939 AC011195.1-201ENST00000578177 177 ntBASIC0.71□□□□□ -2.3
HADHAP40939 MIR378D2-201ENST00000580636 98 ntBASIC0.71□□□□□ -2.3
HADHAP40939 MIR4771-1-201ENST00000582617 74 ntBASIC0.71□□□□□ -2.3
HADHAP40939 U4.1-201ENST00000620349 87 ntBASIC0.71□□□□□ -2.3
HADHAP40939 Y_RNA.308-201ENST00000365043 101 ntBASIC0.7□□□□□ -2.3
HADHAP40939 Y_RNA.430-201ENST00000384081 110 ntBASIC0.7□□□□□ -2.3
HADHAP40939 MIR588-201ENST00000384900 83 ntBASIC0.7□□□□□ -2.3
HADHAP40939 RNU6-1165P-201ENST00000410119 107 ntBASIC0.7□□□□□ -2.3
HADHAP40939 SNORD83.1-201ENST00000411362 77 ntBASIC0.7□□□□□ -2.3
HADHAP40939 HMGN1P33-201ENST00000432945 451 ntBASIC0.7□□□□□ -2.3
HADHAP40939 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
HADHAP40939 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.7□□□□□ -2.3
HADHAP40939 snoU13.21-201ENST00000459368 105 ntBASIC0.7□□□□□ -2.3
HADHAP40939 Y_RNA.797-201ENST00000515977 94 ntBASIC0.7□□□□□ -2.3
HADHAP40939 RNU6-561P-201ENST00000516222 102 ntBASIC0.7□□□□□ -2.3
HADHAP40939 MIR6740-201ENST00000618268 113 ntBASIC0.7□□□□□ -2.3
HADHAP40939 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
HADHAP40939 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
HADHAP40939 SNORD27-201ENST00000363981 72 ntBASIC0.69□□□□□ -2.3
HADHAP40939 MIR520F-201ENST00000384824 87 ntBASIC0.69□□□□□ -2.3
HADHAP40939 MIR573-201ENST00000384964 99 ntBASIC0.69□□□□□ -2.3
HADHAP40939 MIR568-201ENST00000385036 95 ntBASIC0.69□□□□□ -2.3
HADHAP40939 MIR563-201ENST00000385080 79 ntBASIC0.69□□□□□ -2.3
HADHAP40939 MIR4714-201ENST00000580728 77 ntBASIC0.69□□□□□ -2.3
HADHAP40939 MIR4804-201ENST00000581683 73 ntBASIC0.69□□□□□ -2.3
HADHAP40939 MIR4676-201ENST00000583078 72 ntBASIC0.69□□□□□ -2.3
HADHAP40939 AL590095.2-201ENST00000604136 117 ntBASIC0.69□□□□□ -2.3
HADHAP40939 PVT1_3.1-201ENST00000620853 95 ntBASIC0.69□□□□□ -2.3
HADHAP40939 MIR6717-201ENST00000622747 73 ntBASIC0.69□□□□□ -2.3
HADHAP40939 AC023934.1-201ENST00000574529 2389 ntBASIC0.68□□□□□ -2.3
HADHAP40939 MIR342-201ENST00000362212 99 ntBASIC0.68□□□□□ -2.3
HADHAP40939 SNORD114-26-201ENST00000363543 72 ntBASIC0.68□□□□□ -2.3
HADHAP40939 RNU6-1319P-201ENST00000390855 104 ntBASIC0.68□□□□□ -2.3
HADHAP40939 RNU6-747P-201ENST00000390928 104 ntBASIC0.68□□□□□ -2.3
HADHAP40939 RNU6-241P-201ENST00000391148 104 ntBASIC0.68□□□□□ -2.3
HADHAP40939 SNORA26.6-201ENST00000391256 115 ntBASIC0.68□□□□□ -2.3
HADHAP40939 RNU6-177P-201ENST00000411257 104 ntBASIC0.68□□□□□ -2.3
HADHAP40939 Y_RNA.626-201ENST00000411288 95 ntBASIC0.68□□□□□ -2.3
HADHAP40939 RNU6-1023P-201ENST00000516137 106 ntBASIC0.68□□□□□ -2.3
HADHAP40939 RNU7-70P-201ENST00000516941 66 ntBASIC0.68□□□□□ -2.3
HADHAP40939 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
HADHAP40939 AC091932.4-201ENST00000623386 200 ntBASIC0.68□□□□□ -2.3
HADHAP40939 Y_RNA.193-201ENST00000363979 102 ntBASIC0.67□□□□□ -2.3
HADHAP40939 RNU6-978P-201ENST00000364371 103 ntBASIC0.67□□□□□ -2.3
HADHAP40939 SNORA20-201ENST00000384662 132 ntBASIC0.67□□□□□ -2.3
HADHAP40939 Y_RNA.571-201ENST00000384753 98 ntBASIC0.67□□□□□ -2.3
HADHAP40939 MIR520H-201ENST00000385126 88 ntBASIC0.67□□□□□ -2.3
HADHAP40939 MIR624-201ENST00000385217 97 ntBASIC0.67□□□□□ -2.3
HADHAP40939 MIR938-201ENST00000401216 83 ntBASIC0.67□□□□□ -2.3
HADHAP40939 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
HADHAP40939 RNA5SP127-201ENST00000411051 133 ntBASIC0.67□□□□□ -2.3
HADHAP40939 MTND3P2-201ENST00000438452 342 ntBASIC0.67□□□□□ -2.3
HADHAP40939 AL118496.2-201ENST00000448300 230 ntBASIC0.67□□□□□ -2.3
HADHAP40939 AC018659.1-201ENST00000551083 169 ntBASIC0.67□□□□□ -2.3
HADHAP40939 AC010332.2-201ENST00000613083 1904 ntBASIC0.66□□□□□ -2.3
HADHAP40939 Y_RNA.65-201ENST00000362846 100 ntBASIC0.66□□□□□ -2.3
HADHAP40939 RNU6-702P-201ENST00000364982 107 ntBASIC0.66□□□□□ -2.3
HADHAP40939 RNU6-643P-201ENST00000384018 107 ntBASIC0.66□□□□□ -2.3
HADHAP40939 RNU4-70P-201ENST00000384579 139 ntBASIC0.66□□□□□ -2.3
HADHAP40939 Y_RNA.539-201ENST00000384635 107 ntBASIC0.66□□□□□ -2.3
HADHAP40939 RNU6-493P-201ENST00000391321 108 ntBASIC0.66□□□□□ -2.3
HADHAP40939 MIR1257-201ENST00000408490 117 ntBASIC0.66□□□□□ -2.3
HADHAP40939 RNU7-56P-201ENST00000458744 62 ntBASIC0.66□□□□□ -2.3
HADHAP40939 RNU6-893P-201ENST00000458841 100 ntBASIC0.66□□□□□ -2.3
HADHAP40939 Z83818.1-201ENST00000603584 150 ntBASIC0.66□□□□□ -2.3
HADHAP40939 RNU2-4P-201ENST00000606190 192 ntBASIC0.66□□□□□ -2.3
HADHAP40939 uc_338.6-201ENST00000613544 171 ntBASIC0.66□□□□□ -2.3
HADHAP40939 Y_RNA.515-201ENST00000384535 112 ntBASIC0.65□□□□□ -2.31
HADHAP40939 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
HADHAP40939 RNU6-733P-201ENST00000410759 104 ntBASIC0.65□□□□□ -2.31
HADHAP40939 RNA5SP121-201ENST00000516537 101 ntBASIC0.65□□□□□ -2.31
HADHAP40939 AC004817.2-201ENST00000561794 651 ntBASIC0.65□□□□□ -2.31
HADHAP40939 MIR6513-201ENST00000621188 64 ntBASIC0.65□□□□□ -2.31
HADHAP40939 MIR376A2-201ENST00000636782 80 ntBASIC0.65□□□□□ -2.31
HADHAP40939 SNORA25.7-201ENST00000364375 127 ntBASIC0.64□□□□□ -2.31
HADHAP40939 SNORA20.1-201ENST00000364790 130 ntBASIC0.64□□□□□ -2.31
HADHAP40939 RNU6-275P-201ENST00000364910 107 ntBASIC0.64□□□□□ -2.31
HADHAP40939 MIR216A-201ENST00000385063 110 ntBASIC0.64□□□□□ -2.31
HADHAP40939 MIR125B2-201ENST00000385128 89 ntBASIC0.64□□□□□ -2.31
HADHAP40939 RNU6-1190P-201ENST00000410811 104 ntBASIC0.64□□□□□ -2.31
HADHAP40939 RNA5SP222-201ENST00000411039 105 ntBASIC0.64□□□□□ -2.31
HADHAP40939 RNY3P16-201ENST00000516338 101 ntBASIC0.64□□□□□ -2.31
HADHAP40939 AC020891.4-201ENST00000605745 93 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms