Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC244669.1-204ENST00000621564 178 ntBASIC-0.29□□□□□ -2.46
RFC3P40938 RNU6-597P-201ENST00000365620 102 ntBASIC-0.3□□□□□ -2.46
RFC3P40938 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.3□□□□□ -2.46
RFC3P40938 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
RFC3P40938 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.3□□□□□ -2.46
RFC3P40938 PMCHL1-202ENST00000423102 261 ntBASIC-0.3□□□□□ -2.46
RFC3P40938 MTND4LP30-201ENST00000454092 297 ntBASIC-0.3□□□□□ -2.46
RFC3P40938 RNU7-45P-201ENST00000459460 63 ntBASIC-0.3□□□□□ -2.46
RFC3P40938 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.3□□□□□ -2.46
RFC3P40938 MIR4752-201ENST00000579672 72 ntBASIC-0.3□□□□□ -2.46
RFC3P40938 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.3□□□□□ -2.46
RFC3P40938 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.31□□□□□ -2.46
RFC3P40938 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.31□□□□□ -2.46
RFC3P40938 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.31□□□□□ -2.46
RFC3P40938 RNU6-535P-201ENST00000384722 107 ntBASIC-0.31□□□□□ -2.46
RFC3P40938 MIR1912-201ENST00000410389 80 ntBASIC-0.31□□□□□ -2.46
RFC3P40938 RNU2-55P-201ENST00000411146 174 ntBASIC-0.31□□□□□ -2.46
RFC3P40938 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.31□□□□□ -2.46
RFC3P40938 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.31□□□□□ -2.46
RFC3P40938 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.31□□□□□ -2.46
RFC3P40938 MIR3152-201ENST00000579801 74 ntBASIC-0.31□□□□□ -2.46
RFC3P40938 AL132765.2-201ENST00000610812 351 ntBASIC-0.31□□□□□ -2.46
RFC3P40938 AC007485.1-201ENST00000616755 206 ntBASIC-0.31□□□□□ -2.46
RFC3P40938 SNORD114-31-201ENST00000363219 75 ntBASIC-0.32□□□□□ -2.46
RFC3P40938 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.32□□□□□ -2.46
RFC3P40938 RNU6-756P-201ENST00000383997 107 ntBASIC-0.32□□□□□ -2.46
RFC3P40938 SNORA72.6-201ENST00000384520 129 ntBASIC-0.32□□□□□ -2.46
RFC3P40938 SNORD115-46-201ENST00000390982 71 ntBASIC-0.32□□□□□ -2.46
RFC3P40938 RNU6-269P-201ENST00000391077 97 ntBASIC-0.32□□□□□ -2.46
RFC3P40938 MIR1302-11-201ENST00000408051 138 ntBASIC-0.32□□□□□ -2.46
RFC3P40938 MIR1302-9-201ENST00000408365 138 ntBASIC-0.32□□□□□ -2.46
RFC3P40938 MIR1302-10-201ENST00000408734 138 ntBASIC-0.32□□□□□ -2.46
RFC3P40938 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.32□□□□□ -2.46
RFC3P40938 SNORD19B-201ENST00000459623 84 ntBASIC-0.32□□□□□ -2.46
RFC3P40938 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.32□□□□□ -2.46
RFC3P40938 MTND5P34-201ENST00000568888 325 ntBASIC-0.32□□□□□ -2.46
RFC3P40938 RNU1-29P-201ENST00000606574 126 ntBASIC-0.32□□□□□ -2.46
RFC3P40938 MIR1302-2-201ENST00000607096 138 ntBASIC-0.32□□□□□ -2.46
RFC3P40938 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.33□□□□□ -2.46
RFC3P40938 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.33□□□□□ -2.46
RFC3P40938 RNU6-949P-201ENST00000384040 107 ntBASIC-0.33□□□□□ -2.46
RFC3P40938 AC138393.2-201ENST00000414742 246 ntBASIC-0.33□□□□□ -2.46
RFC3P40938 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.33□□□□□ -2.46
RFC3P40938 RNU7-159P-201ENST00000459284 62 ntBASIC-0.33□□□□□ -2.46
RFC3P40938 RNU7-80P-201ENST00000459562 61 ntBASIC-0.33□□□□□ -2.46
RFC3P40938 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.33□□□□□ -2.46
RFC3P40938 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.34□□□□□ -2.46
RFC3P40938 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.34□□□□□ -2.46
RFC3P40938 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.34□□□□□ -2.46
RFC3P40938 RNU6-484P-201ENST00000384016 107 ntBASIC-0.34□□□□□ -2.46
RFC3P40938 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.34□□□□□ -2.46
RFC3P40938 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.34□□□□□ -2.46
RFC3P40938 RNU6-507P-201ENST00000516045 100 ntBASIC-0.34□□□□□ -2.46
RFC3P40938 RNA5SP153-201ENST00000516498 76 ntBASIC-0.34□□□□□ -2.46
RFC3P40938 RNU6-320P-201ENST00000516511 106 ntBASIC-0.34□□□□□ -2.46
RFC3P40938 AP003072.1-201ENST00000531740 145 ntBASIC-0.34□□□□□ -2.46
RFC3P40938 AC138869.1-201ENST00000568623 124 ntBASIC-0.34□□□□□ -2.46
RFC3P40938 AC006006.1-201ENST00000603082 144 ntBASIC-0.34□□□□□ -2.46
RFC3P40938 AC097639.2-201ENST00000603159 172 ntBASIC-0.34□□□□□ -2.46
RFC3P40938 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.34□□□□□ -2.46
RFC3P40938 AL596211.1-201ENST00000569873 2277 ntBASIC-0.35□□□□□ -2.47
RFC3P40938 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.35□□□□□ -2.47
RFC3P40938 RNU6-652P-201ENST00000365488 107 ntBASIC-0.35□□□□□ -2.47
RFC3P40938 SNORA63.7-201ENST00000365579 123 ntBASIC-0.35□□□□□ -2.47
RFC3P40938 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.35□□□□□ -2.47
RFC3P40938 RNU7-165P-201ENST00000458864 60 ntBASIC-0.35□□□□□ -2.47
RFC3P40938 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.35□□□□□ -2.47
RFC3P40938 AL133255.1-201ENST00000606374 441 ntBASIC-0.35□□□□□ -2.47
RFC3P40938 AL008718.3-201ENST00000610217 321 ntBASIC-0.35□□□□□ -2.47
RFC3P40938 AC006157.1-201ENST00000611750 366 ntBASIC-0.35□□□□□ -2.47
RFC3P40938 RNU6-161P-201ENST00000363051 106 ntBASIC-0.36□□□□□ -2.47
RFC3P40938 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.36□□□□□ -2.47
RFC3P40938 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.36□□□□□ -2.47
RFC3P40938 RNU6-923P-201ENST00000364753 107 ntBASIC-0.36□□□□□ -2.47
RFC3P40938 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.36□□□□□ -2.47
RFC3P40938 RNU6-290P-201ENST00000365212 101 ntBASIC-0.36□□□□□ -2.47
RFC3P40938 SNORA8.3-201ENST00000384679 139 ntBASIC-0.36□□□□□ -2.47
RFC3P40938 AL731563.1-201ENST00000442202 214 ntBASIC-0.36□□□□□ -2.47
RFC3P40938 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.36□□□□□ -2.47
RFC3P40938 SNORA25.16-201ENST00000516741 121 ntBASIC-0.36□□□□□ -2.47
RFC3P40938 IGLVI-20-201ENST00000519296 130 ntBASIC-0.36□□□□□ -2.47
RFC3P40938 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
RFC3P40938 AC091932.4-201ENST00000623386 200 ntBASIC-0.36□□□□□ -2.47
RFC3P40938 MIR6841-201ENST00000637129 72 ntBASIC-0.36□□□□□ -2.47
RFC3P40938 AC112487.2-201ENST00000637950 304 ntBASIC-0.36□□□□□ -2.47
RFC3P40938 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.37□□□□□ -2.47
RFC3P40938 RNA5SP275-201ENST00000363936 118 ntBASIC-0.37□□□□□ -2.47
RFC3P40938 RNU4-10P-201ENST00000364383 140 ntBASIC-0.37□□□□□ -2.47
RFC3P40938 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.37□□□□□ -2.47
RFC3P40938 RNU6-326P-201ENST00000365480 107 ntBASIC-0.37□□□□□ -2.47
RFC3P40938 SNORA1-201ENST00000384107 130 ntBASIC-0.37□□□□□ -2.47
RFC3P40938 RNU6-662P-201ENST00000384253 104 ntBASIC-0.37□□□□□ -2.47
RFC3P40938 SNORA20-201ENST00000384662 132 ntBASIC-0.37□□□□□ -2.47
RFC3P40938 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.37□□□□□ -2.47
RFC3P40938 SNORD4A-201ENST00000459174 72 ntBASIC-0.37□□□□□ -2.47
RFC3P40938 FGF7P4-201ENST00000509595 295 ntBASIC-0.37□□□□□ -2.47
RFC3P40938 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.37□□□□□ -2.47
RFC3P40938 RNA5SP395-201ENST00000516567 118 ntBASIC-0.37□□□□□ -2.47
RFC3P40938 MIR8064-201ENST00000612863 90 ntBASIC-0.37□□□□□ -2.47
RFC3P40938 snoU18.1-201ENST00000629629 71 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 239.2 ms