Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 MIR548AO-201ENST00000579992 96 ntBASIC2.45□□□□□ -2.02
SOX18P35713 MIR4251-201ENST00000635819 61 ntBASIC2.45□□□□□ -2.02
SOX18P35713 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.45□□□□□ -2.02
SOX18P35713 VTRNA1-1-201ENST00000363120 99 ntBASIC2.44□□□□□ -2.02
SOX18P35713 Y_RNA.140-201ENST00000363474 103 ntBASIC2.44□□□□□ -2.02
SOX18P35713 SNORD58A-201ENST00000383875 65 ntBASIC2.44□□□□□ -2.02
SOX18P35713 RNU6-322P-201ENST00000516010 103 ntBASIC2.44□□□□□ -2.02
SOX18P35713 RNU7-193P-201ENST00000516723 65 ntBASIC2.44□□□□□ -2.02
SOX18P35713 MIR4668-201ENST00000582284 70 ntBASIC2.44□□□□□ -2.02
SOX18P35713 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
SOX18P35713 AC005336.3-201ENST00000623833 2679 ntBASIC2.44□□□□□ -2.02
SOX18P35713 MIR1255A-201ENST00000408338 113 ntBASIC2.43□□□□□ -2.02
SOX18P35713 AL445685.2-201ENST00000422551 342 ntBASIC2.43□□□□□ -2.02
SOX18P35713 RNU6-1006P-201ENST00000516998 103 ntBASIC2.43□□□□□ -2.02
SOX18P35713 SNORA31.25-201ENST00000517242 134 ntBASIC2.43□□□□□ -2.02
SOX18P35713 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.43□□□□□ -2.02
SOX18P35713 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SOX18P35713 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.42□□□□□ -2.02
SOX18P35713 RNU6-1163P-201ENST00000364516 107 ntBASIC2.42□□□□□ -2.02
SOX18P35713 RNU6-219P-201ENST00000364728 107 ntBASIC2.42□□□□□ -2.02
SOX18P35713 RNA5SP259-201ENST00000365541 109 ntBASIC2.42□□□□□ -2.02
SOX18P35713 SNORD38B-201ENST00000384690 67 ntBASIC2.42□□□□□ -2.02
SOX18P35713 MIR196B-201ENST00000384852 84 ntBASIC2.42□□□□□ -2.02
SOX18P35713 RNU6-1321P-201ENST00000390905 107 ntBASIC2.42□□□□□ -2.02
SOX18P35713 RNA5SP210-201ENST00000391034 120 ntBASIC2.42□□□□□ -2.02
SOX18P35713 RNA5SP237-201ENST00000410414 113 ntBASIC2.42□□□□□ -2.02
SOX18P35713 SPINT5P-201ENST00000448174 155 ntBASIC2.42□□□□□ -2.02
SOX18P35713 MIR5588-201ENST00000581890 63 ntBASIC2.42□□□□□ -2.02
SOX18P35713 SEPT14P17-201ENST00000617978 177 ntBASIC2.42□□□□□ -2.02
SOX18P35713 SNORD38B-202ENST00000625943 69 ntBASIC2.42□□□□□ -2.02
SOX18P35713 RNU6-859P-201ENST00000362728 107 ntBASIC2.41□□□□□ -2.02
SOX18P35713 RNU1-52P-201ENST00000384190 164 ntBASIC2.41□□□□□ -2.02
SOX18P35713 RNU7-41P-201ENST00000515917 61 ntBASIC2.41□□□□□ -2.02
SOX18P35713 RNU7-137P-201ENST00000516788 62 ntBASIC2.41□□□□□ -2.02
SOX18P35713 MIR3670-2-201ENST00000582974 65 ntBASIC2.41□□□□□ -2.02
SOX18P35713 MIR3935-201ENST00000583472 104 ntBASIC2.41□□□□□ -2.02
SOX18P35713 MIR3670-1-201ENST00000584160 65 ntBASIC2.41□□□□□ -2.02
SOX18P35713 MIR3670-3-201ENST00000584855 65 ntBASIC2.41□□□□□ -2.02
SOX18P35713 MIR3670-4-201ENST00000612260 65 ntBASIC2.41□□□□□ -2.02
SOX18P35713 SNORD114-10-201ENST00000363409 72 ntBASIC2.4□□□□□ -2.03
SOX18P35713 DEFA7P-201ENST00000382676 285 ntBASIC2.4□□□□□ -2.03
SOX18P35713 SNORA70B-201ENST00000384210 135 ntBASIC2.4□□□□□ -2.03
SOX18P35713 AC019129.1-201ENST00000403786 261 ntBASIC2.4□□□□□ -2.03
SOX18P35713 MIR548G-201ENST00000408442 89 ntBASIC2.4□□□□□ -2.03
SOX18P35713 Y_RNA.620-201ENST00000411009 88 ntBASIC2.4□□□□□ -2.03
SOX18P35713 AC004965.1-201ENST00000413033 213 ntBASIC2.4□□□□□ -2.03
SOX18P35713 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.4□□□□□ -2.03
SOX18P35713 AC027119.1-201ENST00000440877 241 ntBASIC2.4□□□□□ -2.03
SOX18P35713 RNU7-48P-201ENST00000458875 63 ntBASIC2.4□□□□□ -2.03
SOX18P35713 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.4□□□□□ -2.03
SOX18P35713 RNA5SP138-201ENST00000365098 114 ntBASIC2.39□□□□□ -2.03
SOX18P35713 SNORD38.2-201ENST00000384470 69 ntBASIC2.39□□□□□ -2.03
SOX18P35713 Y_RNA.567-201ENST00000384736 106 ntBASIC2.39□□□□□ -2.03
SOX18P35713 SNORD111.1-201ENST00000516421 86 ntBASIC2.39□□□□□ -2.03
SOX18P35713 SNORA31.15-201ENST00000516771 132 ntBASIC2.39□□□□□ -2.03
SOX18P35713 MTND5P40-201ENST00000559945 246 ntBASIC2.39□□□□□ -2.03
SOX18P35713 RNU6-90P-201ENST00000606352 106 ntBASIC2.39□□□□□ -2.03
SOX18P35713 MIR7843-201ENST00000622274 79 ntBASIC2.39□□□□□ -2.03
SOX18P35713 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.39□□□□□ -2.03
SOX18P35713 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SOX18P35713 RNU6-979P-201ENST00000383896 107 ntBASIC2.38□□□□□ -2.03
SOX18P35713 Y_RNA.437-201ENST00000384113 113 ntBASIC2.38□□□□□ -2.03
SOX18P35713 MIR513A1-201ENST00000385138 129 ntBASIC2.38□□□□□ -2.03
SOX18P35713 RNU6-447P-201ENST00000410293 104 ntBASIC2.38□□□□□ -2.03
SOX18P35713 RNU6-1118P-201ENST00000410382 104 ntBASIC2.38□□□□□ -2.03
SOX18P35713 RNU6-1076P-201ENST00000410397 104 ntBASIC2.38□□□□□ -2.03
SOX18P35713 RNU6-355P-201ENST00000410427 104 ntBASIC2.38□□□□□ -2.03
SOX18P35713 RNU6-791P-201ENST00000410467 104 ntBASIC2.38□□□□□ -2.03
SOX18P35713 RNU6-705P-201ENST00000410601 104 ntBASIC2.38□□□□□ -2.03
SOX18P35713 Y_RNA.609-201ENST00000410669 89 ntBASIC2.38□□□□□ -2.03
SOX18P35713 Y_RNA.611-201ENST00000410682 108 ntBASIC2.38□□□□□ -2.03
SOX18P35713 RNU6-1100P-201ENST00000410691 104 ntBASIC2.38□□□□□ -2.03
SOX18P35713 RNU6-860P-201ENST00000410860 104 ntBASIC2.38□□□□□ -2.03
SOX18P35713 RNU6-1217P-201ENST00000411276 104 ntBASIC2.38□□□□□ -2.03
SOX18P35713 RNU6-785P-201ENST00000411324 104 ntBASIC2.38□□□□□ -2.03
SOX18P35713 RNA5SP320-201ENST00000516263 124 ntBASIC2.38□□□□□ -2.03
SOX18P35713 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.38□□□□□ -2.03
SOX18P35713 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.38□□□□□ -2.03
SOX18P35713 U6.90-201ENST00000614007 104 ntBASIC2.38□□□□□ -2.03
SOX18P35713 U6.70-201ENST00000620287 104 ntBASIC2.38□□□□□ -2.03
SOX18P35713 RNA5SP276-201ENST00000362580 94 ntBASIC2.37□□□□□ -2.03
SOX18P35713 Y_RNA.98-201ENST00000363109 102 ntBASIC2.37□□□□□ -2.03
SOX18P35713 RNU6-1244P-201ENST00000363614 108 ntBASIC2.37□□□□□ -2.03
SOX18P35713 Y_RNA.191-201ENST00000363972 113 ntBASIC2.37□□□□□ -2.03
SOX18P35713 AC133485.1-201ENST00000567176 124 ntBASIC2.37□□□□□ -2.03
SOX18P35713 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.37□□□□□ -2.03
SOX18P35713 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SOX18P35713 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SOX18P35713 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SOX18P35713 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.36□□□□□ -2.03
SOX18P35713 RNA5SP68-201ENST00000363885 119 ntBASIC2.36□□□□□ -2.03
SOX18P35713 Y_RNA.426-201ENST00000384068 113 ntBASIC2.36□□□□□ -2.03
SOX18P35713 MIR504-201ENST00000385065 83 ntBASIC2.36□□□□□ -2.03
SOX18P35713 AL513328.1-201ENST00000446460 224 ntBASIC2.36□□□□□ -2.03
SOX18P35713 AC009474.2-201ENST00000451383 136 ntBASIC2.36□□□□□ -2.03
SOX18P35713 RNU1-98P-201ENST00000458992 160 ntBASIC2.36□□□□□ -2.03
SOX18P35713 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.36□□□□□ -2.03
SOX18P35713 RNU1-41P-201ENST00000516161 162 ntBASIC2.36□□□□□ -2.03
SOX18P35713 RNU1-48P-201ENST00000516400 162 ntBASIC2.36□□□□□ -2.03
SOX18P35713 RNA5SP148-201ENST00000516527 94 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms