Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
HOXC8P31273 SUMO1P3-201ENST00000439961 304 ntBASIC1.16□□□□□ -2.22
HOXC8P31273 RNU7-197P-201ENST00000458836 62 ntBASIC1.16□□□□□ -2.22
HOXC8P31273 RNU7-67P-201ENST00000459003 62 ntBASIC1.16□□□□□ -2.22
HOXC8P31273 RPS29P24-201ENST00000486345 171 ntBASIC1.16□□□□□ -2.22
HOXC8P31273 RNA5SP220-201ENST00000516298 104 ntBASIC1.16□□□□□ -2.22
HOXC8P31273 RNU6-958P-201ENST00000516995 106 ntBASIC1.16□□□□□ -2.22
HOXC8P31273 MIR548X2-201ENST00000579776 100 ntBASIC1.16□□□□□ -2.22
HOXC8P31273 AC243994.1-201ENST00000618627 109 ntBASIC1.16□□□□□ -2.22
HOXC8P31273 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HOXC8P31273 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.15□□□□□ -2.23
HOXC8P31273 Y_RNA.251-201ENST00000364551 99 ntBASIC1.15□□□□□ -2.23
HOXC8P31273 RNY1P5-201ENST00000383890 115 ntBASIC1.15□□□□□ -2.23
HOXC8P31273 RNU6-42P-201ENST00000384165 107 ntBASIC1.15□□□□□ -2.23
HOXC8P31273 RNU6-1067P-201ENST00000384752 107 ntBASIC1.15□□□□□ -2.23
HOXC8P31273 MIR569-201ENST00000385228 96 ntBASIC1.15□□□□□ -2.23
HOXC8P31273 RNU6-1054P-201ENST00000411293 104 ntBASIC1.15□□□□□ -2.23
HOXC8P31273 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.15□□□□□ -2.23
HOXC8P31273 RNU2-13P-201ENST00000515909 113 ntBASIC1.15□□□□□ -2.23
HOXC8P31273 RNU6-426P-201ENST00000516464 97 ntBASIC1.15□□□□□ -2.23
HOXC8P31273 SCARNA15-202ENST00000516881 127 ntBASIC1.15□□□□□ -2.23
HOXC8P31273 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
HOXC8P31273 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
HOXC8P31273 MIR4251-201ENST00000635819 61 ntBASIC1.15□□□□□ -2.23
HOXC8P31273 AL596211.1-201ENST00000569873 2277 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.14□□□□□ -2.23
HOXC8P31273 SNORA25.3-201ENST00000363205 127 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 RNU6-187P-201ENST00000384139 106 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 Y_RNA.537-201ENST00000384626 109 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 MIR548M-201ENST00000408260 86 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 MIR548J-201ENST00000408833 112 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 AC245047.7-201ENST00000440265 293 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 snoU13.25-201ENST00000458945 104 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 RNU2-11P-201ENST00000459191 187 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 AC048334.1-201ENST00000477975 159 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 RPS23P4-201ENST00000487908 423 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 Y_RNA.686-201ENST00000516548 134 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 Y_RNA.703-201ENST00000516846 111 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 RNU7-70P-201ENST00000516941 66 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 RNU2-60P-201ENST00000517290 128 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 MIR151B-201ENST00000584249 96 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 AL078603.1-201ENST00000603824 313 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 AC027335.2-201ENST00000624030 375 ntBASIC1.14□□□□□ -2.23
HOXC8P31273 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
HOXC8P31273 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.14□□□□□ -2.23
HOXC8P31273 RNU6-508P-201ENST00000363231 103 ntBASIC1.13□□□□□ -2.23
HOXC8P31273 RNU4-38P-201ENST00000364472 129 ntBASIC1.13□□□□□ -2.23
HOXC8P31273 Y_RNA.420-201ENST00000384043 110 ntBASIC1.13□□□□□ -2.23
HOXC8P31273 RNU6-746P-201ENST00000384112 109 ntBASIC1.13□□□□□ -2.23
HOXC8P31273 AL035398.1-201ENST00000430869 322 ntBASIC1.13□□□□□ -2.23
HOXC8P31273 RNU7-96P-201ENST00000459535 64 ntBASIC1.13□□□□□ -2.23
HOXC8P31273 RNU6-998P-201ENST00000515894 101 ntBASIC1.13□□□□□ -2.23
HOXC8P31273 AC091932.4-201ENST00000623386 200 ntBASIC1.13□□□□□ -2.23
HOXC8P31273 MIR302B-201ENST00000362188 73 ntBASIC1.12□□□□□ -2.23
HOXC8P31273 RNA5SP48-201ENST00000363969 126 ntBASIC1.12□□□□□ -2.23
HOXC8P31273 RNU6-915P-201ENST00000364943 103 ntBASIC1.12□□□□□ -2.23
HOXC8P31273 SNORA24-201ENST00000384096 131 ntBASIC1.12□□□□□ -2.23
HOXC8P31273 MIR532-201ENST00000385025 91 ntBASIC1.12□□□□□ -2.23
HOXC8P31273 SNORD12-201ENST00000391002 90 ntBASIC1.12□□□□□ -2.23
HOXC8P31273 RNU7-80P-201ENST00000459562 61 ntBASIC1.12□□□□□ -2.23
HOXC8P31273 RNA5SP236-201ENST00000516169 116 ntBASIC1.12□□□□□ -2.23
HOXC8P31273 RNU6-1223P-201ENST00000517124 104 ntBASIC1.12□□□□□ -2.23
HOXC8P31273 MIR548AO-201ENST00000579992 96 ntBASIC1.12□□□□□ -2.23
HOXC8P31273 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.12□□□□□ -2.23
HOXC8P31273 RNU1-124P-201ENST00000363861 145 ntBASIC1.11□□□□□ -2.23
HOXC8P31273 RNU1-133P-201ENST00000364867 167 ntBASIC1.11□□□□□ -2.23
HOXC8P31273 Y_RNA.343-201ENST00000365354 112 ntBASIC1.11□□□□□ -2.23
HOXC8P31273 SNORD18B-201ENST00000365659 72 ntBASIC1.11□□□□□ -2.23
HOXC8P31273 SNORA80D-201ENST00000384488 135 ntBASIC1.11□□□□□ -2.23
HOXC8P31273 RNU6-913P-201ENST00000390913 95 ntBASIC1.11□□□□□ -2.23
HOXC8P31273 RNU7-45P-201ENST00000459460 63 ntBASIC1.11□□□□□ -2.23
HOXC8P31273 RNU5E-3P-201ENST00000515913 68 ntBASIC1.11□□□□□ -2.23
HOXC8P31273 RNU7-53P-201ENST00000516705 60 ntBASIC1.11□□□□□ -2.23
HOXC8P31273 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.11□□□□□ -2.23
HOXC8P31273 AC012676.2-201ENST00000619258 186 ntBASIC1.11□□□□□ -2.23
HOXC8P31273 Y_RNA.454-201ENST00000384224 113 ntBASIC1.1□□□□□ -2.23
HOXC8P31273 RNU6-1190P-201ENST00000410811 104 ntBASIC1.1□□□□□ -2.23
HOXC8P31273 AC063976.4-201ENST00000421971 163 ntBASIC1.1□□□□□ -2.23
HOXC8P31273 Y_RNA.690-201ENST00000516603 95 ntBASIC1.1□□□□□ -2.23
HOXC8P31273 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.1□□□□□ -2.23
HOXC8P31273 HSPE1P19-201ENST00000603327 295 ntBASIC1.1□□□□□ -2.23
HOXC8P31273 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HOXC8P31273 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
HOXC8P31273 AC010332.2-201ENST00000613083 1904 ntBASIC1.09□□□□□ -2.23
HOXC8P31273 Y_RNA.120-201ENST00000363304 110 ntBASIC1.09□□□□□ -2.23
HOXC8P31273 RNU6-309P-201ENST00000364573 106 ntBASIC1.09□□□□□ -2.23
HOXC8P31273 RNU4-16P-201ENST00000364737 141 ntBASIC1.09□□□□□ -2.23
HOXC8P31273 Y_RNA.568-201ENST00000384742 113 ntBASIC1.09□□□□□ -2.23
HOXC8P31273 AL603908.1-201ENST00000406098 201 ntBASIC1.09□□□□□ -2.23
HOXC8P31273 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.09□□□□□ -2.23
HOXC8P31273 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.09□□□□□ -2.23
HOXC8P31273 HMGN1P33-201ENST00000432945 451 ntBASIC1.09□□□□□ -2.23
HOXC8P31273 MTATP6P21-201ENST00000440681 189 ntBASIC1.09□□□□□ -2.23
HOXC8P31273 RNU7-73P-201ENST00000458743 63 ntBASIC1.09□□□□□ -2.23
HOXC8P31273 snoU13.16-201ENST00000459350 104 ntBASIC1.09□□□□□ -2.23
HOXC8P31273 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.09□□□□□ -2.23
HOXC8P31273 AP001328.1-201ENST00000528550 176 ntBASIC1.09□□□□□ -2.23
HOXC8P31273 MIR3973-201ENST00000579824 107 ntBASIC1.09□□□□□ -2.23
HOXC8P31273 AC211469.2-201ENST00000605461 205 ntBASIC1.09□□□□□ -2.23
HOXC8P31273 MIR6857-201ENST00000613267 93 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 250.3 ms