Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MIR26B-201ENST00000362251 77 ntBASIC1.55□□□□□ -2.16
CNGA1P29973 MIR96-201ENST00000362288 78 ntBASIC1.55□□□□□ -2.16
CNGA1P29973 RNU1-133P-201ENST00000364867 167 ntBASIC1.55□□□□□ -2.16
CNGA1P29973 MIR2115-201ENST00000516657 100 ntBASIC1.55□□□□□ -2.16
CNGA1P29973 MTND5P41-201ENST00000517498 206 ntBASIC1.55□□□□□ -2.16
CNGA1P29973 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.55□□□□□ -2.16
CNGA1P29973 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.55□□□□□ -2.16
CNGA1P29973 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.55□□□□□ -2.16
CNGA1P29973 RNU6-396P-201ENST00000365369 105 ntBASIC1.54□□□□□ -2.16
CNGA1P29973 MIR222-201ENST00000384992 110 ntBASIC1.54□□□□□ -2.16
CNGA1P29973 RNU6-613P-201ENST00000410412 108 ntBASIC1.54□□□□□ -2.16
CNGA1P29973 RNU6-1190P-201ENST00000410811 104 ntBASIC1.54□□□□□ -2.16
CNGA1P29973 AC090844.1-201ENST00000422019 156 ntBASIC1.54□□□□□ -2.16
CNGA1P29973 RNU7-197P-201ENST00000458836 62 ntBASIC1.54□□□□□ -2.16
CNGA1P29973 RNU2-60P-201ENST00000517290 128 ntBASIC1.54□□□□□ -2.16
CNGA1P29973 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CNGA1P29973 SNORD114-27-201ENST00000363766 70 ntBASIC1.53□□□□□ -2.16
CNGA1P29973 MT-TN-201ENST00000387400 73 ntBASIC1.53□□□□□ -2.16
CNGA1P29973 Y_RNA.584-201ENST00000391090 114 ntBASIC1.53□□□□□ -2.16
CNGA1P29973 SNORA26.6-201ENST00000391256 115 ntBASIC1.53□□□□□ -2.16
CNGA1P29973 HMGN1P33-201ENST00000432945 451 ntBASIC1.53□□□□□ -2.16
CNGA1P29973 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.53□□□□□ -2.16
CNGA1P29973 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CNGA1P29973 Y_RNA.170-201ENST00000363746 110 ntBASIC1.52□□□□□ -2.17
CNGA1P29973 SNORA1.1-201ENST00000364671 133 ntBASIC1.52□□□□□ -2.17
CNGA1P29973 Y_RNA.400-201ENST00000383963 111 ntBASIC1.52□□□□□ -2.17
CNGA1P29973 RNU6-125P-201ENST00000384505 107 ntBASIC1.52□□□□□ -2.17
CNGA1P29973 MIR613-201ENST00000385248 95 ntBASIC1.52□□□□□ -2.17
CNGA1P29973 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.52□□□□□ -2.17
CNGA1P29973 RNU6-654P-201ENST00000364373 107 ntBASIC1.51□□□□□ -2.17
CNGA1P29973 AC063976.4-201ENST00000421971 163 ntBASIC1.51□□□□□ -2.17
CNGA1P29973 RNU7-90P-201ENST00000459216 62 ntBASIC1.51□□□□□ -2.17
CNGA1P29973 RNU7-45P-201ENST00000459460 63 ntBASIC1.51□□□□□ -2.17
CNGA1P29973 RNU6-255P-201ENST00000516957 105 ntBASIC1.51□□□□□ -2.17
CNGA1P29973 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.51□□□□□ -2.17
CNGA1P29973 Y_RNA.120-201ENST00000363304 110 ntBASIC1.5□□□□□ -2.17
CNGA1P29973 Y_RNA.330-201ENST00000365230 109 ntBASIC1.5□□□□□ -2.17
CNGA1P29973 RNU6-1319P-201ENST00000390855 104 ntBASIC1.5□□□□□ -2.17
CNGA1P29973 RNU6-747P-201ENST00000390928 104 ntBASIC1.5□□□□□ -2.17
CNGA1P29973 RNU6-241P-201ENST00000391148 104 ntBASIC1.5□□□□□ -2.17
CNGA1P29973 RNA5SP261-201ENST00000410536 106 ntBASIC1.5□□□□□ -2.17
CNGA1P29973 RNU6-177P-201ENST00000411257 104 ntBASIC1.5□□□□□ -2.17
CNGA1P29973 AC002429.1-201ENST00000437672 148 ntBASIC1.5□□□□□ -2.17
CNGA1P29973 RNA5SP61-201ENST00000516453 100 ntBASIC1.5□□□□□ -2.17
CNGA1P29973 MIR6717-201ENST00000622747 73 ntBASIC1.5□□□□□ -2.17
CNGA1P29973 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.5□□□□□ -2.17
CNGA1P29973 AC008163.1-202ENST00000636004 2889 ntBASIC1.49□□□□□ -2.17
CNGA1P29973 MIR377-201ENST00000362145 69 ntBASIC1.49□□□□□ -2.17
CNGA1P29973 SNORA25.8-201ENST00000364831 128 ntBASIC1.49□□□□□ -2.17
CNGA1P29973 RNY1P6-201ENST00000384193 109 ntBASIC1.49□□□□□ -2.17
CNGA1P29973 MIR19B1-201ENST00000384829 87 ntBASIC1.49□□□□□ -2.17
CNGA1P29973 RNU6-602P-201ENST00000411155 105 ntBASIC1.49□□□□□ -2.17
CNGA1P29973 MTATP6P21-201ENST00000440681 189 ntBASIC1.49□□□□□ -2.17
CNGA1P29973 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.49□□□□□ -2.17
CNGA1P29973 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.49□□□□□ -2.17
CNGA1P29973 RNU7-200P-201ENST00000516105 62 ntBASIC1.49□□□□□ -2.17
CNGA1P29973 RNA5SP480-201ENST00000516840 109 ntBASIC1.49□□□□□ -2.17
CNGA1P29973 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.49□□□□□ -2.17
CNGA1P29973 MIR4264-201ENST00000583520 66 ntBASIC1.49□□□□□ -2.17
CNGA1P29973 MIR6515-201ENST00000619843 57 ntBASIC1.49□□□□□ -2.17
CNGA1P29973 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
CNGA1P29973 Y_RNA.215-201ENST00000364204 112 ntBASIC1.48□□□□□ -2.17
CNGA1P29973 Y_RNA.430-201ENST00000384081 110 ntBASIC1.48□□□□□ -2.17
CNGA1P29973 SNORD38B-201ENST00000384690 67 ntBASIC1.48□□□□□ -2.17
CNGA1P29973 MIR520E-201ENST00000384867 87 ntBASIC1.48□□□□□ -2.17
CNGA1P29973 MIR513C-201ENST00000401352 84 ntBASIC1.48□□□□□ -2.17
CNGA1P29973 MRPL35P3-201ENST00000421557 364 ntBASIC1.48□□□□□ -2.17
CNGA1P29973 AC244023.1-201ENST00000426884 112 ntBASIC1.48□□□□□ -2.17
CNGA1P29973 RPS29P1-201ENST00000465274 159 ntBASIC1.48□□□□□ -2.17
CNGA1P29973 AC004223.1-201ENST00000479840 271 ntBASIC1.48□□□□□ -2.17
CNGA1P29973 RNA5SP404-201ENST00000517118 132 ntBASIC1.48□□□□□ -2.17
CNGA1P29973 MIR548X2-201ENST00000579776 100 ntBASIC1.48□□□□□ -2.17
CNGA1P29973 AC242498.1-201ENST00000604134 111 ntBASIC1.48□□□□□ -2.17
CNGA1P29973 AC021613.1-201ENST00000623880 111 ntBASIC1.48□□□□□ -2.17
CNGA1P29973 SNORD38B-202ENST00000625943 69 ntBASIC1.48□□□□□ -2.17
CNGA1P29973 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
CNGA1P29973 RNU6-349P-201ENST00000362402 107 ntBASIC1.47□□□□□ -2.17
CNGA1P29973 RNU1-124P-201ENST00000363861 145 ntBASIC1.47□□□□□ -2.17
CNGA1P29973 MIR618-201ENST00000385287 98 ntBASIC1.47□□□□□ -2.17
CNGA1P29973 SNORA40.6-201ENST00000391153 128 ntBASIC1.47□□□□□ -2.17
CNGA1P29973 RPS3AP1-201ENST00000413190 320 ntBASIC1.47□□□□□ -2.17
CNGA1P29973 AC036111.3-201ENST00000526389 112 ntBASIC1.47□□□□□ -2.17
CNGA1P29973 AP000753.3-201ENST00000604083 169 ntBASIC1.47□□□□□ -2.17
CNGA1P29973 MIR6841-201ENST00000637129 72 ntBASIC1.47□□□□□ -2.17
CNGA1P29973 RNY1P5-201ENST00000383890 115 ntBASIC1.46□□□□□ -2.18
CNGA1P29973 MIR569-201ENST00000385228 96 ntBASIC1.46□□□□□ -2.18
CNGA1P29973 AL603914.1-201ENST00000401964 204 ntBASIC1.46□□□□□ -2.18
CNGA1P29973 RPS23P4-201ENST00000487908 423 ntBASIC1.46□□□□□ -2.18
CNGA1P29973 SNORA25.12-201ENST00000516202 82 ntBASIC1.46□□□□□ -2.18
CNGA1P29973 Y_RNA.686-201ENST00000516548 134 ntBASIC1.46□□□□□ -2.18
CNGA1P29973 MIR3152-201ENST00000579801 74 ntBASIC1.46□□□□□ -2.18
CNGA1P29973 AC011603.4-201ENST00000611325 277 ntBASIC1.46□□□□□ -2.18
CNGA1P29973 AC022709.1-201ENST00000615967 87 ntBASIC1.46□□□□□ -2.18
CNGA1P29973 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.46□□□□□ -2.18
CNGA1P29973 Y_RNA.168-201ENST00000363740 102 ntBASIC1.45□□□□□ -2.18
CNGA1P29973 RNU1-93P-201ENST00000364704 169 ntBASIC1.45□□□□□ -2.18
CNGA1P29973 RNU6-580P-201ENST00000365159 107 ntBASIC1.45□□□□□ -2.18
CNGA1P29973 SNORD18B-201ENST00000365659 72 ntBASIC1.45□□□□□ -2.18
CNGA1P29973 SNORA20-201ENST00000384662 132 ntBASIC1.45□□□□□ -2.18
CNGA1P29973 MIR150-201ENST00000385048 84 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms