Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNU6-191P-201ENST00000516295 94 ntBASIC-0.74□□□□□ -2.53
HLA-DMBP28068 RNU6-531P-201ENST00000516694 104 ntBASIC-0.74□□□□□ -2.53
HLA-DMBP28068 IGKV1-22-201ENST00000524313 326 ntBASIC-0.74□□□□□ -2.53
HLA-DMBP28068 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.75□□□□□ -2.53
HLA-DMBP28068 SNORA25.7-201ENST00000364375 127 ntBASIC-0.75□□□□□ -2.53
HLA-DMBP28068 MIR635-201ENST00000384830 98 ntBASIC-0.75□□□□□ -2.53
HLA-DMBP28068 RNU6-763P-201ENST00000390865 106 ntBASIC-0.75□□□□□ -2.53
HLA-DMBP28068 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.75□□□□□ -2.53
HLA-DMBP28068 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.75□□□□□ -2.53
HLA-DMBP28068 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-0.75□□□□□ -2.53
HLA-DMBP28068 MTCO2P24-201ENST00000515611 426 ntBASIC-0.75□□□□□ -2.53
HLA-DMBP28068 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.75□□□□□ -2.53
HLA-DMBP28068 VN1R91P-201ENST00000594377 169 ntBASIC-0.75□□□□□ -2.53
HLA-DMBP28068 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.76□□□□□ -2.53
HLA-DMBP28068 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.76□□□□□ -2.53
HLA-DMBP28068 RNU6-310P-201ENST00000384655 107 ntBASIC-0.76□□□□□ -2.53
HLA-DMBP28068 Y_RNA.554-201ENST00000384672 102 ntBASIC-0.76□□□□□ -2.53
HLA-DMBP28068 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
HLA-DMBP28068 SNORD110-201ENST00000408189 75 ntBASIC-0.76□□□□□ -2.53
HLA-DMBP28068 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.76□□□□□ -2.53
HLA-DMBP28068 MTND1P29-201ENST00000448112 647 ntBASIC-0.76□□□□□ -2.53
HLA-DMBP28068 RNU7-104P-201ENST00000459398 79 ntBASIC-0.76□□□□□ -2.53
HLA-DMBP28068 RNU6-397P-201ENST00000516226 104 ntBASIC-0.76□□□□□ -2.53
HLA-DMBP28068 SNORA25.13-201ENST00000516395 103 ntBASIC-0.76□□□□□ -2.53
HLA-DMBP28068 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.77□□□□□ -2.53
HLA-DMBP28068 RNU6-890P-201ENST00000384121 107 ntBASIC-0.77□□□□□ -2.53
HLA-DMBP28068 RNU6-21P-201ENST00000384710 107 ntBASIC-0.77□□□□□ -2.53
HLA-DMBP28068 RNU6-735P-201ENST00000410612 107 ntBASIC-0.77□□□□□ -2.53
HLA-DMBP28068 AC006210.1-201ENST00000424882 111 ntBASIC-0.77□□□□□ -2.53
HLA-DMBP28068 MTND1P34-201ENST00000438556 671 ntBASIC-0.77□□□□□ -2.53
HLA-DMBP28068 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.77□□□□□ -2.53
HLA-DMBP28068 DEFB131E-201ENST00000532329 154 ntBASIC-0.77□□□□□ -2.53
HLA-DMBP28068 NAMPTP3-201ENST00000569273 224 ntBASIC-0.77□□□□□ -2.53
HLA-DMBP28068 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.77□□□□□ -2.53
HLA-DMBP28068 MIR4724-201ENST00000579485 89 ntBASIC-0.77□□□□□ -2.53
HLA-DMBP28068 AC013791.1-201ENST00000616619 62 ntBASIC-0.77□□□□□ -2.53
HLA-DMBP28068 MIR367-201ENST00000362299 68 ntBASIC-0.78□□□□□ -2.53
HLA-DMBP28068 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.78□□□□□ -2.53
HLA-DMBP28068 RNY3-201ENST00000365484 102 ntBASIC-0.78□□□□□ -2.53
HLA-DMBP28068 SNORA18-201ENST00000384416 132 ntBASIC-0.78□□□□□ -2.53
HLA-DMBP28068 RNU4-14P-201ENST00000410858 122 ntBASIC-0.78□□□□□ -2.53
HLA-DMBP28068 BX276092.1-201ENST00000427368 251 ntBASIC-0.78□□□□□ -2.53
HLA-DMBP28068 AC099799.1-201ENST00000439809 192 ntBASIC-0.78□□□□□ -2.53
HLA-DMBP28068 RNU7-80P-201ENST00000459562 61 ntBASIC-0.78□□□□□ -2.53
HLA-DMBP28068 AC245505.1-201ENST00000556398 224 ntBASIC-0.78□□□□□ -2.53
HLA-DMBP28068 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.78□□□□□ -2.53
HLA-DMBP28068 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.78□□□□□ -2.53
HLA-DMBP28068 AC048344.4-201ENST00000619744 527 ntBASIC-0.78□□□□□ -2.53
HLA-DMBP28068 SNORA22.1-201ENST00000362701 134 ntBASIC-0.79□□□□□ -2.54
HLA-DMBP28068 SNORD114-14-201ENST00000362723 75 ntBASIC-0.79□□□□□ -2.54
HLA-DMBP28068 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.79□□□□□ -2.54
HLA-DMBP28068 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.79□□□□□ -2.54
HLA-DMBP28068 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.79□□□□□ -2.54
HLA-DMBP28068 AC096644.2-201ENST00000429278 159 ntBASIC-0.79□□□□□ -2.54
HLA-DMBP28068 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.79□□□□□ -2.54
HLA-DMBP28068 AL121655.1-201ENST00000605811 308 ntBASIC-0.79□□□□□ -2.54
HLA-DMBP28068 AC091932.4-201ENST00000623386 200 ntBASIC-0.79□□□□□ -2.54
HLA-DMBP28068 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.79□□□□□ -2.54
HLA-DMBP28068 RNA5SP133-201ENST00000363368 119 ntBASIC-0.8□□□□□ -2.54
HLA-DMBP28068 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.8□□□□□ -2.54
HLA-DMBP28068 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.8□□□□□ -2.54
HLA-DMBP28068 RNU6-937P-201ENST00000384325 106 ntBASIC-0.8□□□□□ -2.54
HLA-DMBP28068 SNORA20-201ENST00000384662 132 ntBASIC-0.8□□□□□ -2.54
HLA-DMBP28068 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.8□□□□□ -2.54
HLA-DMBP28068 MIR516B1-201ENST00000385211 90 ntBASIC-0.8□□□□□ -2.54
HLA-DMBP28068 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.8□□□□□ -2.54
HLA-DMBP28068 MTND1P14-201ENST00000427400 950 ntBASIC-0.8□□□□□ -2.54
HLA-DMBP28068 MTATP6P23-201ENST00000440153 476 ntBASIC-0.8□□□□□ -2.54
HLA-DMBP28068 snoU13.11-201ENST00000459219 104 ntBASIC-0.8□□□□□ -2.54
HLA-DMBP28068 RNU6-764P-201ENST00000516396 105 ntBASIC-0.8□□□□□ -2.54
HLA-DMBP28068 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.8□□□□□ -2.54
HLA-DMBP28068 MIR376A2-201ENST00000636782 80 ntBASIC-0.8□□□□□ -2.54
HLA-DMBP28068 RNU6-509P-201ENST00000363519 107 ntBASIC-0.81□□□□□ -2.54
HLA-DMBP28068 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.81□□□□□ -2.54
HLA-DMBP28068 U8.6-201ENST00000364939 135 ntBASIC-0.81□□□□□ -2.54
HLA-DMBP28068 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.81□□□□□ -2.54
HLA-DMBP28068 SEPT14P8-201ENST00000508026 178 ntBASIC-0.81□□□□□ -2.54
HLA-DMBP28068 RNA5SP67-201ENST00000516422 131 ntBASIC-0.81□□□□□ -2.54
HLA-DMBP28068 MIR5692C2-201ENST00000577959 77 ntBASIC-0.81□□□□□ -2.54
HLA-DMBP28068 MIR5690-201ENST00000583739 73 ntBASIC-0.81□□□□□ -2.54
HLA-DMBP28068 AL356055.1-201ENST00000602528 446 ntBASIC-0.81□□□□□ -2.54
HLA-DMBP28068 C8orf59P2-201ENST00000603441 271 ntBASIC-0.81□□□□□ -2.54
HLA-DMBP28068 SNORD113-5-201ENST00000607261 78 ntBASIC-0.81□□□□□ -2.54
HLA-DMBP28068 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.81□□□□□ -2.54
HLA-DMBP28068 MIR3688-2-201ENST00000636963 87 ntBASIC-0.81□□□□□ -2.54
HLA-DMBP28068 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.81□□□□□ -2.54
HLA-DMBP28068 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.82□□□□□ -2.54
HLA-DMBP28068 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.82□□□□□ -2.54
HLA-DMBP28068 RNU6-865P-201ENST00000364772 107 ntBASIC-0.82□□□□□ -2.54
HLA-DMBP28068 SNORD116-1-201ENST00000384335 95 ntBASIC-0.82□□□□□ -2.54
HLA-DMBP28068 SNORA3B-201ENST00000391305 131 ntBASIC-0.82□□□□□ -2.54
HLA-DMBP28068 RNU6-370P-201ENST00000411008 104 ntBASIC-0.82□□□□□ -2.54
HLA-DMBP28068 RNA5SP484-201ENST00000458857 111 ntBASIC-0.82□□□□□ -2.54
HLA-DMBP28068 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.82□□□□□ -2.54
HLA-DMBP28068 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-0.82□□□□□ -2.54
HLA-DMBP28068 MIR5688-201ENST00000580619 83 ntBASIC-0.82□□□□□ -2.54
HLA-DMBP28068 MIR4436A-201ENST00000585278 85 ntBASIC-0.82□□□□□ -2.54
HLA-DMBP28068 AC021613.1-201ENST00000623880 111 ntBASIC-0.82□□□□□ -2.54
HLA-DMBP28068 MIR4272-201ENST00000635924 64 ntBASIC-0.82□□□□□ -2.54
HLA-DMBP28068 RNU6-490P-201ENST00000362985 107 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms