Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.75□□□□□ -2.29
CHMP24386 COX6CP6-201ENST00000490840 228 ntBASIC0.75□□□□□ -2.29
CHMP24386 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
CHMP24386 MIR5197-201ENST00000583721 112 ntBASIC0.75□□□□□ -2.29
CHMP24386 U4.1-201ENST00000620349 87 ntBASIC0.75□□□□□ -2.29
CHMP24386 MIR6734-201ENST00000621166 68 ntBASIC0.75□□□□□ -2.29
CHMP24386 RNU6-702P-201ENST00000364982 107 ntBASIC0.74□□□□□ -2.29
CHMP24386 Y_RNA.307-201ENST00000365022 117 ntBASIC0.74□□□□□ -2.29
CHMP24386 MIR548J-201ENST00000408833 112 ntBASIC0.74□□□□□ -2.29
CHMP24386 RNU4-43P-201ENST00000410628 137 ntBASIC0.74□□□□□ -2.29
CHMP24386 SEPT7P4-201ENST00000437076 306 ntBASIC0.74□□□□□ -2.29
CHMP24386 Y_RNA.797-201ENST00000515977 94 ntBASIC0.74□□□□□ -2.29
CHMP24386 CYP3A137P-201ENST00000562436 69 ntBASIC0.74□□□□□ -2.29
CHMP24386 MIR4676-201ENST00000583078 72 ntBASIC0.74□□□□□ -2.29
CHMP24386 Y_RNA.193-201ENST00000363979 102 ntBASIC0.73□□□□□ -2.29
CHMP24386 RNY4P28-201ENST00000365281 93 ntBASIC0.73□□□□□ -2.29
CHMP24386 SNORA36.2-201ENST00000384004 127 ntBASIC0.73□□□□□ -2.29
CHMP24386 RNU6-578P-201ENST00000390980 103 ntBASIC0.73□□□□□ -2.29
CHMP24386 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.73□□□□□ -2.29
CHMP24386 RNU6-1165P-201ENST00000410119 107 ntBASIC0.73□□□□□ -2.29
CHMP24386 Y_RNA.618-201ENST00000410949 107 ntBASIC0.73□□□□□ -2.29
CHMP24386 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.73□□□□□ -2.29
CHMP24386 RNU7-45P-201ENST00000459460 63 ntBASIC0.73□□□□□ -2.29
CHMP24386 RNU7-80P-201ENST00000459562 61 ntBASIC0.73□□□□□ -2.29
CHMP24386 MIR3149-201ENST00000584629 83 ntBASIC0.73□□□□□ -2.29
CHMP24386 AL596211.1-201ENST00000569873 2277 ntBASIC0.72□□□□□ -2.29
CHMP24386 Y_RNA.447-201ENST00000384184 113 ntBASIC0.72□□□□□ -2.29
CHMP24386 Y_RNA.454-201ENST00000384224 113 ntBASIC0.72□□□□□ -2.29
CHMP24386 SNORD12C-201ENST00000386307 89 ntBASIC0.72□□□□□ -2.29
CHMP24386 RNA5SP261-201ENST00000410536 106 ntBASIC0.72□□□□□ -2.29
CHMP24386 Y_RNA.626-201ENST00000411288 95 ntBASIC0.72□□□□□ -2.29
CHMP24386 MIR18B-201ENST00000454574 71 ntBASIC0.72□□□□□ -2.29
CHMP24386 snoU13.2-201ENST00000459201 104 ntBASIC0.72□□□□□ -2.29
CHMP24386 SNORD116-25-201ENST00000516517 92 ntBASIC0.72□□□□□ -2.29
CHMP24386 RNU6-111P-201ENST00000517179 105 ntBASIC0.72□□□□□ -2.29
CHMP24386 MIR4804-201ENST00000581683 73 ntBASIC0.72□□□□□ -2.29
CHMP24386 AL365205.2-201ENST00000594586 68 ntBASIC0.72□□□□□ -2.29
CHMP24386 AC020891.4-201ENST00000605745 93 ntBASIC0.72□□□□□ -2.29
CHMP24386 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.72□□□□□ -2.29
CHMP24386 MIR6717-201ENST00000622747 73 ntBASIC0.72□□□□□ -2.29
CHMP24386 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
CHMP24386 HSBP1P2-201ENST00000299671 229 ntBASIC0.71□□□□□ -2.3
CHMP24386 Y_RNA.20-201ENST00000362479 113 ntBASIC0.71□□□□□ -2.3
CHMP24386 SNORA20.1-201ENST00000364790 130 ntBASIC0.71□□□□□ -2.3
CHMP24386 Y_RNA.354-201ENST00000365448 111 ntBASIC0.71□□□□□ -2.3
CHMP24386 RNU6-1292P-201ENST00000383856 107 ntBASIC0.71□□□□□ -2.3
CHMP24386 MIR573-201ENST00000384964 99 ntBASIC0.71□□□□□ -2.3
CHMP24386 RNU7-70P-201ENST00000516941 66 ntBASIC0.71□□□□□ -2.3
CHMP24386 MIR4308-201ENST00000580634 81 ntBASIC0.71□□□□□ -2.3
CHMP24386 MIR378D2-201ENST00000580636 98 ntBASIC0.71□□□□□ -2.3
CHMP24386 AC091932.4-201ENST00000623386 200 ntBASIC0.71□□□□□ -2.3
CHMP24386 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CHMP24386 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CHMP24386 Y_RNA.144-201ENST00000363521 113 ntBASIC0.7□□□□□ -2.3
CHMP24386 Y_RNA.182-201ENST00000363880 111 ntBASIC0.7□□□□□ -2.3
CHMP24386 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CHMP24386 MIR5000-201ENST00000577717 103 ntBASIC0.7□□□□□ -2.3
CHMP24386 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.69□□□□□ -2.3
CHMP24386 Y_RNA.452-201ENST00000384202 108 ntBASIC0.69□□□□□ -2.3
CHMP24386 Y_RNA.478-201ENST00000384358 107 ntBASIC0.69□□□□□ -2.3
CHMP24386 Y_RNA.571-201ENST00000384753 98 ntBASIC0.69□□□□□ -2.3
CHMP24386 SNORA26.6-201ENST00000391256 115 ntBASIC0.69□□□□□ -2.3
CHMP24386 MIR938-201ENST00000401216 83 ntBASIC0.69□□□□□ -2.3
CHMP24386 MIR1257-201ENST00000408490 117 ntBASIC0.69□□□□□ -2.3
CHMP24386 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.69□□□□□ -2.3
CHMP24386 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.69□□□□□ -2.3
CHMP24386 AL162730.1-201ENST00000605734 292 ntBASIC0.69□□□□□ -2.3
CHMP24386 Y_RNA.118-201ENST00000363300 101 ntBASIC0.68□□□□□ -2.3
CHMP24386 Y_RNA.121-201ENST00000363309 113 ntBASIC0.68□□□□□ -2.3
CHMP24386 RNU6-463P-201ENST00000384340 107 ntBASIC0.68□□□□□ -2.3
CHMP24386 RNU4-70P-201ENST00000384579 139 ntBASIC0.68□□□□□ -2.3
CHMP24386 SNORA20-201ENST00000384662 132 ntBASIC0.68□□□□□ -2.3
CHMP24386 RNU7-185P-201ENST00000459215 60 ntBASIC0.68□□□□□ -2.3
CHMP24386 RNU6-1023P-201ENST00000516137 106 ntBASIC0.68□□□□□ -2.3
CHMP24386 AC022709.1-201ENST00000615967 87 ntBASIC0.68□□□□□ -2.3
CHMP24386 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CHMP24386 RNU6-978P-201ENST00000364371 103 ntBASIC0.67□□□□□ -2.3
CHMP24386 RNU6-643P-201ENST00000384018 107 ntBASIC0.67□□□□□ -2.3
CHMP24386 RNU6-364P-201ENST00000384387 107 ntBASIC0.67□□□□□ -2.3
CHMP24386 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.67□□□□□ -2.3
CHMP24386 RNU4-71P-201ENST00000516258 113 ntBASIC0.67□□□□□ -2.3
CHMP24386 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CHMP24386 MIR3152-201ENST00000579801 74 ntBASIC0.67□□□□□ -2.3
CHMP24386 MIR6835-201ENST00000621552 64 ntBASIC0.67□□□□□ -2.3
CHMP24386 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CHMP24386 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
CHMP24386 RNU1-133P-201ENST00000364867 167 ntBASIC0.66□□□□□ -2.3
CHMP24386 RNU6-1336P-201ENST00000383886 109 ntBASIC0.66□□□□□ -2.3
CHMP24386 RNY1P8-201ENST00000383970 114 ntBASIC0.66□□□□□ -2.3
CHMP24386 RNA5SP237-201ENST00000410414 113 ntBASIC0.66□□□□□ -2.3
CHMP24386 RNA5SP127-201ENST00000411051 133 ntBASIC0.66□□□□□ -2.3
CHMP24386 RPL39P25-201ENST00000449384 154 ntBASIC0.66□□□□□ -2.3
CHMP24386 RNU7-56P-201ENST00000458744 62 ntBASIC0.66□□□□□ -2.3
CHMP24386 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.66□□□□□ -2.3
CHMP24386 AC133485.1-201ENST00000567176 124 ntBASIC0.66□□□□□ -2.3
CHMP24386 AC138907.6-201ENST00000568401 126 ntBASIC0.66□□□□□ -2.3
CHMP24386 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
CHMP24386 RNU6-47P-201ENST00000383866 107 ntBASIC0.65□□□□□ -2.31
CHMP24386 RNU6-945P-201ENST00000383947 107 ntBASIC0.65□□□□□ -2.31
CHMP24386 Y_RNA.412-201ENST00000384001 104 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms