Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC009474.2-201ENST00000451383 136 ntBASIC1.73□□□□□ -2.13
XPAP23025 snoU13.16-201ENST00000459350 104 ntBASIC1.73□□□□□ -2.13
XPAP23025 RNA5SP445-201ENST00000515889 115 ntBASIC1.73□□□□□ -2.13
XPAP23025 MIR3937-201ENST00000580135 106 ntBASIC1.73□□□□□ -2.13
XPAP23025 MIR6717-201ENST00000622747 73 ntBASIC1.73□□□□□ -2.13
XPAP23025 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.73□□□□□ -2.13
XPAP23025 AL391516.1-201ENST00000554380 2449 ntBASIC1.72□□□□□ -2.13
XPAP23025 SNORA25.3-201ENST00000363205 127 ntBASIC1.72□□□□□ -2.13
XPAP23025 Y_RNA.171-201ENST00000363760 102 ntBASIC1.72□□□□□ -2.13
XPAP23025 RNA5SP99-201ENST00000364020 114 ntBASIC1.72□□□□□ -2.13
XPAP23025 RNA5SP190-201ENST00000365222 118 ntBASIC1.72□□□□□ -2.13
XPAP23025 RNU6-482P-201ENST00000391068 107 ntBASIC1.72□□□□□ -2.13
XPAP23025 MTND5P34-201ENST00000568888 325 ntBASIC1.72□□□□□ -2.13
XPAP23025 MIR4769-201ENST00000584126 77 ntBASIC1.72□□□□□ -2.13
XPAP23025 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
XPAP23025 RNU6-429P-201ENST00000384582 108 ntBASIC1.71□□□□□ -2.14
XPAP23025 Y_RNA.629-201ENST00000411368 105 ntBASIC1.71□□□□□ -2.14
XPAP23025 RPS27P16-201ENST00000425758 201 ntBASIC1.71□□□□□ -2.14
XPAP23025 RNU6-165P-201ENST00000517170 99 ntBASIC1.71□□□□□ -2.14
XPAP23025 AC024614.2-201ENST00000577584 372 ntBASIC1.71□□□□□ -2.14
XPAP23025 MIR3683-201ENST00000580847 82 ntBASIC1.71□□□□□ -2.14
XPAP23025 AL357312.1-201ENST00000603879 298 ntBASIC1.71□□□□□ -2.14
XPAP23025 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
XPAP23025 MIR6129-201ENST00000616087 109 ntBASIC1.71□□□□□ -2.14
XPAP23025 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.71□□□□□ -2.14
XPAP23025 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.71□□□□□ -2.14
XPAP23025 U6.95-201ENST00000636931 70 ntBASIC1.71□□□□□ -2.14
XPAP23025 MIR6841-201ENST00000637129 72 ntBASIC1.71□□□□□ -2.14
XPAP23025 RNU1-17P-201ENST00000363022 152 ntBASIC1.7□□□□□ -2.14
XPAP23025 Y_RNA.273-201ENST00000364703 102 ntBASIC1.7□□□□□ -2.14
XPAP23025 SNORD20-201ENST00000384550 80 ntBASIC1.7□□□□□ -2.14
XPAP23025 MIR1302-7-201ENST00000408841 72 ntBASIC1.7□□□□□ -2.14
XPAP23025 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.7□□□□□ -2.14
XPAP23025 DNAJC19P9-201ENST00000555084 351 ntBASIC1.7□□□□□ -2.14
XPAP23025 MIR3664-201ENST00000579074 99 ntBASIC1.7□□□□□ -2.14
XPAP23025 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
XPAP23025 SNORA22.1-201ENST00000362701 134 ntBASIC1.69□□□□□ -2.14
XPAP23025 Y_RNA.346-201ENST00000365385 112 ntBASIC1.69□□□□□ -2.14
XPAP23025 RNU6-1065P-201ENST00000384513 106 ntBASIC1.69□□□□□ -2.14
XPAP23025 MIR548A1-201ENST00000385041 97 ntBASIC1.69□□□□□ -2.14
XPAP23025 RNA5SP136-201ENST00000410906 107 ntBASIC1.69□□□□□ -2.14
XPAP23025 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.69□□□□□ -2.14
XPAP23025 RNU6-902P-201ENST00000517212 91 ntBASIC1.69□□□□□ -2.14
XPAP23025 AC004812.1-201ENST00000540773 146 ntBASIC1.69□□□□□ -2.14
XPAP23025 AL512310.8-201ENST00000550183 120 ntBASIC1.69□□□□□ -2.14
XPAP23025 AP000942.3-201ENST00000603702 160 ntBASIC1.69□□□□□ -2.14
XPAP23025 SNORA1.1-201ENST00000364671 133 ntBASIC1.68□□□□□ -2.14
XPAP23025 RNU6-1144P-201ENST00000384247 104 ntBASIC1.68□□□□□ -2.14
XPAP23025 Y_RNA.470-201ENST00000384307 117 ntBASIC1.68□□□□□ -2.14
XPAP23025 RNU6-476P-201ENST00000384726 107 ntBASIC1.68□□□□□ -2.14
XPAP23025 RNU6-1064P-201ENST00000410626 104 ntBASIC1.68□□□□□ -2.14
XPAP23025 SNORD13-201ENST00000459299 104 ntBASIC1.68□□□□□ -2.14
XPAP23025 MIR3152-201ENST00000579801 74 ntBASIC1.68□□□□□ -2.14
XPAP23025 AL670379.3-201ENST00000605040 251 ntBASIC1.68□□□□□ -2.14
XPAP23025 AL121890.5-201ENST00000620848 304 ntBASIC1.68□□□□□ -2.14
XPAP23025 Z97988.1-201ENST00000637697 135 ntBASIC1.68□□□□□ -2.14
XPAP23025 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.68□□□□□ -2.14
XPAP23025 RNU6-1325P-201ENST00000364905 105 ntBASIC1.67□□□□□ -2.14
XPAP23025 MIR548A3-201ENST00000385297 97 ntBASIC1.67□□□□□ -2.14
XPAP23025 RNU6-602P-201ENST00000411155 105 ntBASIC1.67□□□□□ -2.14
XPAP23025 AL022718.1-201ENST00000412004 84 ntBASIC1.67□□□□□ -2.14
XPAP23025 Y_RNA.649-201ENST00000459077 103 ntBASIC1.67□□□□□ -2.14
XPAP23025 COX6CP6-201ENST00000490840 228 ntBASIC1.67□□□□□ -2.14
XPAP23025 RNU6-237P-201ENST00000515985 71 ntBASIC1.67□□□□□ -2.14
XPAP23025 PRELID3BP2-201ENST00000605362 201 ntBASIC1.67□□□□□ -2.14
XPAP23025 RNA5SP48-201ENST00000363969 126 ntBASIC1.66□□□□□ -2.14
XPAP23025 Y_RNA.198-201ENST00000364013 98 ntBASIC1.66□□□□□ -2.14
XPAP23025 RNU6-1056P-201ENST00000383996 107 ntBASIC1.66□□□□□ -2.14
XPAP23025 Y_RNA.430-201ENST00000384081 110 ntBASIC1.66□□□□□ -2.14
XPAP23025 Y_RNA.531-201ENST00000384589 121 ntBASIC1.66□□□□□ -2.14
XPAP23025 RPS3AP1-201ENST00000413190 320 ntBASIC1.66□□□□□ -2.14
XPAP23025 MIR8065-201ENST00000620577 100 ntBASIC1.66□□□□□ -2.14
XPAP23025 Y_RNA.140-201ENST00000363474 103 ntBASIC1.65□□□□□ -2.15
XPAP23025 RNU6-215P-201ENST00000365169 102 ntBASIC1.65□□□□□ -2.15
XPAP23025 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
XPAP23025 RPL39P39-201ENST00000455840 151 ntBASIC1.65□□□□□ -2.15
XPAP23025 RNU7-113P-201ENST00000459273 62 ntBASIC1.65□□□□□ -2.15
XPAP23025 AP003716.2-201ENST00000528260 108 ntBASIC1.65□□□□□ -2.15
XPAP23025 SNORD53B-201ENST00000577887 78 ntBASIC1.65□□□□□ -2.15
XPAP23025 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
XPAP23025 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
XPAP23025 RNU6-834P-201ENST00000362367 110 ntBASIC1.64□□□□□ -2.15
XPAP23025 MIR1185-1-201ENST00000408598 86 ntBASIC1.64□□□□□ -2.15
XPAP23025 RNA5SP261-201ENST00000410536 106 ntBASIC1.64□□□□□ -2.15
XPAP23025 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.64□□□□□ -2.15
XPAP23025 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
XPAP23025 RNA5SP432-201ENST00000362480 116 ntBASIC1.63□□□□□ -2.15
XPAP23025 Y_RNA.35-201ENST00000362601 101 ntBASIC1.63□□□□□ -2.15
XPAP23025 Y_RNA.549-201ENST00000384657 102 ntBASIC1.63□□□□□ -2.15
XPAP23025 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
XPAP23025 SNORD12C-201ENST00000386307 89 ntBASIC1.63□□□□□ -2.15
XPAP23025 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.63□□□□□ -2.15
XPAP23025 AC244023.1-201ENST00000426884 112 ntBASIC1.63□□□□□ -2.15
XPAP23025 RPL30P7-201ENST00000479312 323 ntBASIC1.63□□□□□ -2.15
XPAP23025 AL133373.1-201ENST00000497098 94 ntBASIC1.63□□□□□ -2.15
XPAP23025 AC113410.1-201ENST00000505029 247 ntBASIC1.63□□□□□ -2.15
XPAP23025 CYP3A52P-201ENST00000563326 91 ntBASIC1.63□□□□□ -2.15
XPAP23025 AC242498.1-201ENST00000604134 111 ntBASIC1.63□□□□□ -2.15
XPAP23025 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.63□□□□□ -2.15
XPAP23025 SNORD116-21-201ENST00000384507 92 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms