Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 MIR5197-201ENST00000583721 112 ntBASIC1.27□□□□□ -2.21
RXRAP19793 SNORD115-40-201ENST00000606510 82 ntBASIC1.27□□□□□ -2.21
RXRAP19793 MIR4791-201ENST00000607666 84 ntBASIC1.27□□□□□ -2.21
RXRAP19793 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.27□□□□□ -2.21
RXRAP19793 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
RXRAP19793 AL157777.2-201ENST00000258070 137 ntBASIC1.26□□□□□ -2.21
RXRAP19793 Y_RNA.120-201ENST00000363304 110 ntBASIC1.26□□□□□ -2.21
RXRAP19793 Y_RNA.224-201ENST00000364308 111 ntBASIC1.26□□□□□ -2.21
RXRAP19793 SNORA70.7-201ENST00000384159 133 ntBASIC1.26□□□□□ -2.21
RXRAP19793 MIR1185-1-201ENST00000408598 86 ntBASIC1.26□□□□□ -2.21
RXRAP19793 RNU6-938P-201ENST00000411285 103 ntBASIC1.26□□□□□ -2.21
RXRAP19793 RNU7-21P-201ENST00000459430 62 ntBASIC1.26□□□□□ -2.21
RXRAP19793 Y_RNA.686-201ENST00000516548 134 ntBASIC1.26□□□□□ -2.21
RXRAP19793 RNU6-1149P-201ENST00000516810 97 ntBASIC1.26□□□□□ -2.21
RXRAP19793 AP003484.1-201ENST00000530974 250 ntBASIC1.26□□□□□ -2.21
RXRAP19793 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.26□□□□□ -2.21
RXRAP19793 SNORD114-21-201ENST00000606412 72 ntBASIC1.26□□□□□ -2.21
RXRAP19793 AP001340.1-201ENST00000624405 217 ntBASIC1.26□□□□□ -2.21
RXRAP19793 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.25□□□□□ -2.21
RXRAP19793 MTND5P32-201ENST00000560711 1802 ntBASIC1.25□□□□□ -2.21
RXRAP19793 MIR103A2-201ENST00000362154 78 ntBASIC1.25□□□□□ -2.21
RXRAP19793 SNORD114-27-201ENST00000363766 70 ntBASIC1.25□□□□□ -2.21
RXRAP19793 SNORA51.10-201ENST00000384418 136 ntBASIC1.25□□□□□ -2.21
RXRAP19793 SNORA19-201ENST00000384737 128 ntBASIC1.25□□□□□ -2.21
RXRAP19793 SNORA40.5-201ENST00000391061 128 ntBASIC1.25□□□□□ -2.21
RXRAP19793 SNORA75.2-201ENST00000391138 150 ntBASIC1.25□□□□□ -2.21
RXRAP19793 SNORA75.3-201ENST00000391231 150 ntBASIC1.25□□□□□ -2.21
RXRAP19793 MIR1302-7-201ENST00000408841 72 ntBASIC1.25□□□□□ -2.21
RXRAP19793 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.25□□□□□ -2.21
RXRAP19793 AC107297.1-201ENST00000459991 176 ntBASIC1.25□□□□□ -2.21
RXRAP19793 RN7SKP179-201ENST00000516126 217 ntBASIC1.25□□□□□ -2.21
RXRAP19793 RNU2-60P-201ENST00000517290 128 ntBASIC1.25□□□□□ -2.21
RXRAP19793 U7.2-201ENST00000607576 63 ntBASIC1.25□□□□□ -2.21
RXRAP19793 Y_RNA.116-201ENST00000363292 103 ntBASIC1.24□□□□□ -2.21
RXRAP19793 Y_RNA.241-201ENST00000364470 117 ntBASIC1.24□□□□□ -2.21
RXRAP19793 RNU6-81P-201ENST00000365608 104 ntBASIC1.24□□□□□ -2.21
RXRAP19793 SNORD18B-201ENST00000365659 72 ntBASIC1.24□□□□□ -2.21
RXRAP19793 Y_RNA.440-201ENST00000384120 114 ntBASIC1.24□□□□□ -2.21
RXRAP19793 MIR570-201ENST00000384917 97 ntBASIC1.24□□□□□ -2.21
RXRAP19793 MIR222-201ENST00000384992 110 ntBASIC1.24□□□□□ -2.21
RXRAP19793 SCARNA15-202ENST00000516881 127 ntBASIC1.24□□□□□ -2.21
RXRAP19793 AL078603.1-201ENST00000603824 313 ntBASIC1.24□□□□□ -2.21
RXRAP19793 AC011603.4-201ENST00000611325 277 ntBASIC1.24□□□□□ -2.21
RXRAP19793 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.24□□□□□ -2.21
RXRAP19793 TUG1_4.1-201ENST00000619464 181 ntBASIC1.24□□□□□ -2.21
RXRAP19793 SNORA25.3-201ENST00000363205 127 ntBASIC1.23□□□□□ -2.21
RXRAP19793 AL603914.1-201ENST00000401964 204 ntBASIC1.23□□□□□ -2.21
RXRAP19793 MRPL35P3-201ENST00000421557 364 ntBASIC1.23□□□□□ -2.21
RXRAP19793 AC063976.4-201ENST00000421971 163 ntBASIC1.23□□□□□ -2.21
RXRAP19793 AC002429.1-201ENST00000437672 148 ntBASIC1.23□□□□□ -2.21
RXRAP19793 MTATP6P21-201ENST00000440681 189 ntBASIC1.23□□□□□ -2.21
RXRAP19793 snoU13.18-201ENST00000459483 104 ntBASIC1.23□□□□□ -2.21
RXRAP19793 RNA5SP236-201ENST00000516169 116 ntBASIC1.23□□□□□ -2.21
RXRAP19793 Y_RNA.690-201ENST00000516603 95 ntBASIC1.23□□□□□ -2.21
RXRAP19793 RNU6-971P-201ENST00000516920 106 ntBASIC1.23□□□□□ -2.21
RXRAP19793 MIR4295-201ENST00000585286 85 ntBASIC1.23□□□□□ -2.21
RXRAP19793 SEPT14P17-201ENST00000617978 177 ntBASIC1.23□□□□□ -2.21
RXRAP19793 AC243994.1-201ENST00000618627 109 ntBASIC1.23□□□□□ -2.21
RXRAP19793 U2.22-201ENST00000636441 106 ntBASIC1.23□□□□□ -2.21
RXRAP19793 SNORD113-1-201ENST00000365321 69 ntBASIC1.22□□□□□ -2.21
RXRAP19793 Y_RNA.355-201ENST00000365462 98 ntBASIC1.22□□□□□ -2.21
RXRAP19793 SNORA27-201ENST00000384323 126 ntBASIC1.22□□□□□ -2.21
RXRAP19793 Y_RNA.494-201ENST00000384432 111 ntBASIC1.22□□□□□ -2.21
RXRAP19793 RNU6-1211P-201ENST00000459179 105 ntBASIC1.22□□□□□ -2.21
RXRAP19793 RNU7-90P-201ENST00000459216 62 ntBASIC1.22□□□□□ -2.21
RXRAP19793 RNU5E-3P-201ENST00000515913 68 ntBASIC1.22□□□□□ -2.21
RXRAP19793 Y_RNA.692-201ENST00000516627 105 ntBASIC1.22□□□□□ -2.21
RXRAP19793 Y_RNA.757-201ENST00000578934 114 ntBASIC1.22□□□□□ -2.21
RXRAP19793 MIR6504-201ENST00000613520 61 ntBASIC1.22□□□□□ -2.21
RXRAP19793 MIR7111-201ENST00000619751 72 ntBASIC1.22□□□□□ -2.21
RXRAP19793 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.22□□□□□ -2.21
RXRAP19793 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RXRAP19793 RNU6-508P-201ENST00000363231 103 ntBASIC1.21□□□□□ -2.22
RXRAP19793 Y_RNA.191-201ENST00000363972 113 ntBASIC1.21□□□□□ -2.22
RXRAP19793 Y_RNA.294-201ENST00000364916 102 ntBASIC1.21□□□□□ -2.22
RXRAP19793 MIR539-201ENST00000365690 78 ntBASIC1.21□□□□□ -2.22
RXRAP19793 RNU6-42P-201ENST00000384165 107 ntBASIC1.21□□□□□ -2.22
RXRAP19793 RNU6-959P-201ENST00000384671 107 ntBASIC1.21□□□□□ -2.22
RXRAP19793 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
RXRAP19793 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.21□□□□□ -2.22
RXRAP19793 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.21□□□□□ -2.22
RXRAP19793 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RXRAP19793 RNU6-309P-201ENST00000364573 106 ntBASIC1.2□□□□□ -2.22
RXRAP19793 Y_RNA.351-201ENST00000365436 96 ntBASIC1.2□□□□□ -2.22
RXRAP19793 AL606753.1-201ENST00000427435 87 ntBASIC1.2□□□□□ -2.22
RXRAP19793 snoU13.16-201ENST00000459350 104 ntBASIC1.2□□□□□ -2.22
RXRAP19793 Y_RNA.651-201ENST00000459380 103 ntBASIC1.2□□□□□ -2.22
RXRAP19793 RPS29P24-201ENST00000486345 171 ntBASIC1.2□□□□□ -2.22
RXRAP19793 RNA5SP220-201ENST00000516298 104 ntBASIC1.2□□□□□ -2.22
RXRAP19793 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
RXRAP19793 RNU7-70P-201ENST00000516941 66 ntBASIC1.2□□□□□ -2.22
RXRAP19793 AC008163.1-202ENST00000636004 2889 ntBASIC1.19□□□□□ -2.22
RXRAP19793 MIR342-201ENST00000362212 99 ntBASIC1.19□□□□□ -2.22
RXRAP19793 MIR96-201ENST00000362288 78 ntBASIC1.19□□□□□ -2.22
RXRAP19793 RNU1-133P-201ENST00000364867 167 ntBASIC1.19□□□□□ -2.22
RXRAP19793 RNU7-96P-201ENST00000459535 64 ntBASIC1.19□□□□□ -2.22
RXRAP19793 RNU7-80P-201ENST00000459562 61 ntBASIC1.19□□□□□ -2.22
RXRAP19793 RNU6-998P-201ENST00000515894 101 ntBASIC1.19□□□□□ -2.22
RXRAP19793 MIR6734-201ENST00000621166 68 ntBASIC1.19□□□□□ -2.22
RXRAP19793 AC091932.4-201ENST00000623386 200 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 237.6 ms