Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TNFRSF1AP19438 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
TNFRSF1AP19438 Y_RNA.57-201ENST00000362806 113 ntBASIC2.09□□□□□ -2.07
TNFRSF1AP19438 RNU7-53P-201ENST00000516705 60 ntBASIC2.09□□□□□ -2.07
TNFRSF1AP19438 DNAJC19P9-201ENST00000555084 351 ntBASIC2.09□□□□□ -2.07
TNFRSF1AP19438 MIR5694-201ENST00000581190 76 ntBASIC2.09□□□□□ -2.07
TNFRSF1AP19438 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.09□□□□□ -2.07
TNFRSF1AP19438 MIR4791-201ENST00000607666 84 ntBASIC2.09□□□□□ -2.07
TNFRSF1AP19438 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.09□□□□□ -2.07
TNFRSF1AP19438 AC027279.3-201ENST00000625055 122 ntBASIC2.09□□□□□ -2.07
TNFRSF1AP19438 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TNFRSF1AP19438 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TNFRSF1AP19438 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
TNFRSF1AP19438 RNU6-1094P-201ENST00000362416 104 ntBASIC2.08□□□□□ -2.08
TNFRSF1AP19438 SNORA70.7-201ENST00000384159 133 ntBASIC2.08□□□□□ -2.08
TNFRSF1AP19438 RNU6-342P-201ENST00000384521 104 ntBASIC2.08□□□□□ -2.08
TNFRSF1AP19438 RNA5SP465-201ENST00000391195 109 ntBASIC2.08□□□□□ -2.08
TNFRSF1AP19438 RNA5SP261-201ENST00000410536 106 ntBASIC2.08□□□□□ -2.08
TNFRSF1AP19438 AL450471.1-201ENST00000447509 127 ntBASIC2.08□□□□□ -2.08
TNFRSF1AP19438 RNU7-67P-201ENST00000459003 62 ntBASIC2.08□□□□□ -2.08
TNFRSF1AP19438 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.08□□□□□ -2.08
TNFRSF1AP19438 AL020996.3-201ENST00000606617 222 ntBASIC2.08□□□□□ -2.08
TNFRSF1AP19438 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
TNFRSF1AP19438 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TNFRSF1AP19438 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
TNFRSF1AP19438 MIR449A-201ENST00000362113 91 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 SNORA16B-201ENST00000364674 135 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 SNORA1.2-201ENST00000365189 134 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 Y_RNA.448-201ENST00000384185 108 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 MIR597-201ENST00000384968 97 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 RNU6-913P-201ENST00000390913 95 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 SPINT5P-201ENST00000448174 155 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 RPS29P29-201ENST00000456396 171 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.07□□□□□ -2.08
TNFRSF1AP19438 RN7SL429P-201ENST00000479090 223 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 RN7SL489P-201ENST00000486185 223 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 RN7SL327P-201ENST00000488659 223 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 SNORA25.13-201ENST00000516395 103 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 MIR4435-1-201ENST00000582552 80 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 MIR3124-201ENST00000582636 67 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 RNU6-90P-201ENST00000606352 106 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 RN7SL853P-201ENST00000617250 223 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 MIR8054-201ENST00000620877 86 ntBASIC2.07□□□□□ -2.08
TNFRSF1AP19438 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.07□□□□□ -2.08
TNFRSF1AP19438 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TNFRSF1AP19438 AL596028.1-201ENST00000326971 197 ntBASIC2.06□□□□□ -2.08
TNFRSF1AP19438 Y_RNA.173-201ENST00000363776 113 ntBASIC2.06□□□□□ -2.08
TNFRSF1AP19438 RNU6-865P-201ENST00000364772 107 ntBASIC2.06□□□□□ -2.08
TNFRSF1AP19438 Y_RNA.340-201ENST00000365330 92 ntBASIC2.06□□□□□ -2.08
TNFRSF1AP19438 Y_RNA.370-201ENST00000365589 108 ntBASIC2.06□□□□□ -2.08
TNFRSF1AP19438 SNORA24-201ENST00000384096 131 ntBASIC2.06□□□□□ -2.08
TNFRSF1AP19438 RNU6-301P-201ENST00000384277 107 ntBASIC2.06□□□□□ -2.08
TNFRSF1AP19438 MIR181B2-201ENST00000385004 89 ntBASIC2.06□□□□□ -2.08
TNFRSF1AP19438 RNU11-3P-201ENST00000391111 133 ntBASIC2.06□□□□□ -2.08
TNFRSF1AP19438 HMGN2P3-201ENST00000433603 273 ntBASIC2.06□□□□□ -2.08
TNFRSF1AP19438 HMGN2P5-201ENST00000436882 273 ntBASIC2.06□□□□□ -2.08
TNFRSF1AP19438 AC087499.7-201ENST00000441958 109 ntBASIC2.06□□□□□ -2.08
TNFRSF1AP19438 SCARNA18B-201ENST00000458806 135 ntBASIC2.06□□□□□ -2.08
TNFRSF1AP19438 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.06□□□□□ -2.08
TNFRSF1AP19438 RNU6-917P-201ENST00000516294 104 ntBASIC2.06□□□□□ -2.08
TNFRSF1AP19438 MIR3134-201ENST00000579433 74 ntBASIC2.06□□□□□ -2.08
TNFRSF1AP19438 SNORD3E-202ENST00000627253 216 ntBASIC2.06□□□□□ -2.08
TNFRSF1AP19438 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
TNFRSF1AP19438 MIR516B2-201ENST00000385190 85 ntBASIC2.05□□□□□ -2.08
TNFRSF1AP19438 RNU6-519P-201ENST00000410590 108 ntBASIC2.05□□□□□ -2.08
TNFRSF1AP19438 HMGN1P33-201ENST00000432945 451 ntBASIC2.05□□□□□ -2.08
TNFRSF1AP19438 AC125388.1-201ENST00000459631 156 ntBASIC2.05□□□□□ -2.08
TNFRSF1AP19438 SNORA31.11-201ENST00000516528 139 ntBASIC2.05□□□□□ -2.08
TNFRSF1AP19438 SNORD67.1-201ENST00000516618 108 ntBASIC2.05□□□□□ -2.08
TNFRSF1AP19438 RNU7-35P-201ENST00000517174 62 ntBASIC2.05□□□□□ -2.08
TNFRSF1AP19438 MIR1291-201ENST00000627649 87 ntBASIC2.05□□□□□ -2.08
TNFRSF1AP19438 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TNFRSF1AP19438 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TNFRSF1AP19438 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TNFRSF1AP19438 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TNFRSF1AP19438 RNU4-82P-201ENST00000362443 140 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 RNU6-624P-201ENST00000363411 107 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 RNA5SP126-201ENST00000365092 109 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 U8.16-201ENST00000391279 133 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 MIR1265-201ENST00000408444 86 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 RNA5SP450-201ENST00000411206 102 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.04□□□□□ -2.08
TNFRSF1AP19438 RNU7-73P-201ENST00000458743 63 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 RNA5SP233-201ENST00000459153 113 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 RPS27P21-201ENST00000486977 252 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 AC234781.5-201ENST00000508429 271 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 SNORA31.10-201ENST00000516482 106 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.04□□□□□ -2.08
TNFRSF1AP19438 MIR4287-201ENST00000579398 78 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 FAM106DP-201ENST00000586416 501 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 AC005786.1-201ENST00000588553 154 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 SNORA28-201ENST00000606769 126 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 AC012676.2-201ENST00000619258 186 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 AC022513.1-201ENST00000624512 117 ntBASIC2.04□□□□□ -2.08
TNFRSF1AP19438 MIR6073-201ENST00000352083 89 ntBASIC2.03□□□□□ -2.08
TNFRSF1AP19438 RNU4-32P-201ENST00000363404 141 ntBASIC2.03□□□□□ -2.08
TNFRSF1AP19438 RNU6-833P-201ENST00000363486 107 ntBASIC2.03□□□□□ -2.08
TNFRSF1AP19438 Y_RNA.168-201ENST00000363740 102 ntBASIC2.03□□□□□ -2.08
TNFRSF1AP19438 RNA5SP138-201ENST00000365098 114 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 226.3 ms