Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL606845.1-201ENST00000404881 255 ntBASIC0.31□□□□□ -2.36
XRCC1P18887 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.31□□□□□ -2.36
XRCC1P18887 AL138752.1-201ENST00000452964 351 ntBASIC0.31□□□□□ -2.36
XRCC1P18887 RNU7-102P-201ENST00000458948 62 ntBASIC0.31□□□□□ -2.36
XRCC1P18887 SNORA68.3-201ENST00000515906 83 ntBASIC0.31□□□□□ -2.36
XRCC1P18887 RNU6-570P-201ENST00000517051 105 ntBASIC0.31□□□□□ -2.36
XRCC1P18887 uc_338.16-201ENST00000621804 95 ntBASIC0.31□□□□□ -2.36
XRCC1P18887 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.31□□□□□ -2.36
XRCC1P18887 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 MIR30D-201ENST00000362283 70 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 Y_RNA.199-201ENST00000364014 102 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 Y_RNA.351-201ENST00000365436 96 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 MIR7-2-201ENST00000384970 110 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 SNORD12C-201ENST00000386307 89 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 SNORA79-201ENST00000408376 140 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 Y_RNA.622-201ENST00000411091 108 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.3□□□□□ -2.36
XRCC1P18887 MTCYBP6-201ENST00000441810 138 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 RNU6-1137P-201ENST00000517073 99 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 MIR1273G-201ENST00000577677 100 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 MIR3152-201ENST00000579801 74 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 AC044792.1-201ENST00000593294 196 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 U2.14-201ENST00000615943 113 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 AP001282.2-201ENST00000616149 309 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 MIR6717-201ENST00000622747 73 ntBASIC0.3□□□□□ -2.36
XRCC1P18887 Y_RNA.304-201ENST00000365011 112 ntBASIC0.29□□□□□ -2.36
XRCC1P18887 RNA5SP117-201ENST00000365294 118 ntBASIC0.29□□□□□ -2.36
XRCC1P18887 MT-TT-201ENST00000387460 66 ntBASIC0.29□□□□□ -2.36
XRCC1P18887 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
XRCC1P18887 Y_RNA.590-201ENST00000410140 107 ntBASIC0.29□□□□□ -2.36
XRCC1P18887 Y_RNA.618-201ENST00000410949 107 ntBASIC0.29□□□□□ -2.36
XRCC1P18887 SNORD71-201ENST00000411292 86 ntBASIC0.29□□□□□ -2.36
XRCC1P18887 RNU6-653P-201ENST00000363074 106 ntBASIC0.28□□□□□ -2.36
XRCC1P18887 Y_RNA.237-201ENST00000364439 102 ntBASIC0.28□□□□□ -2.36
XRCC1P18887 RNU6-1292P-201ENST00000383856 107 ntBASIC0.28□□□□□ -2.36
XRCC1P18887 Y_RNA.422-201ENST00000384054 114 ntBASIC0.28□□□□□ -2.36
XRCC1P18887 Y_RNA.430-201ENST00000384081 110 ntBASIC0.28□□□□□ -2.36
XRCC1P18887 RNU6-679P-201ENST00000391003 106 ntBASIC0.28□□□□□ -2.36
XRCC1P18887 SNORA26.6-201ENST00000391256 115 ntBASIC0.28□□□□□ -2.36
XRCC1P18887 RNU6-1190P-201ENST00000410811 104 ntBASIC0.28□□□□□ -2.36
XRCC1P18887 SNORA40.8-201ENST00000411034 126 ntBASIC0.28□□□□□ -2.36
XRCC1P18887 Y_RNA.679-201ENST00000516416 91 ntBASIC0.28□□□□□ -2.36
XRCC1P18887 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
XRCC1P18887 Y_RNA.701-201ENST00000516812 110 ntBASIC0.28□□□□□ -2.36
XRCC1P18887 RNU6-448P-201ENST00000517052 107 ntBASIC0.28□□□□□ -2.36
XRCC1P18887 MIR4282-201ENST00000583613 67 ntBASIC0.28□□□□□ -2.36
XRCC1P18887 AC008608.1-201ENST00000603910 127 ntBASIC0.28□□□□□ -2.36
XRCC1P18887 MIR342-201ENST00000362212 99 ntBASIC0.27□□□□□ -2.37
XRCC1P18887 Y_RNA.205-201ENST00000364128 113 ntBASIC0.27□□□□□ -2.37
XRCC1P18887 snoU2_19.4-201ENST00000364329 80 ntBASIC0.27□□□□□ -2.37
XRCC1P18887 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
XRCC1P18887 SNORA25.12-201ENST00000516202 82 ntBASIC0.27□□□□□ -2.37
XRCC1P18887 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.27□□□□□ -2.37
XRCC1P18887 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
XRCC1P18887 RNU6-728P-201ENST00000365375 104 ntBASIC0.26□□□□□ -2.37
XRCC1P18887 SNORA1-201ENST00000384107 130 ntBASIC0.26□□□□□ -2.37
XRCC1P18887 MIR518A1-201ENST00000385068 85 ntBASIC0.26□□□□□ -2.37
XRCC1P18887 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.26□□□□□ -2.37
XRCC1P18887 MIR5197-201ENST00000583721 112 ntBASIC0.26□□□□□ -2.37
XRCC1P18887 AL365265.1-201ENST00000621045 234 ntBASIC0.26□□□□□ -2.37
XRCC1P18887 Y_RNA.23-201ENST00000362496 106 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 RNU6-103P-201ENST00000363686 107 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 RNA5SP517-201ENST00000364724 117 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 RNU6-1227P-201ENST00000383981 107 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 RNU6-381P-201ENST00000391259 108 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 MIR1302-6-201ENST00000408466 90 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 SNORD93-201ENST00000408813 74 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 RNA5SP237-201ENST00000410414 113 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 RNU4-43P-201ENST00000410628 137 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 RPL39P25-201ENST00000449384 154 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 RNU6-863P-201ENST00000515989 104 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 RNU6-453P-201ENST00000516819 85 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 RNA5SP94-201ENST00000516917 108 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 MIR6779-201ENST00000617283 64 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 MIR924-201ENST00000638017 53 ntBASIC0.25□□□□□ -2.37
XRCC1P18887 SNORA20-201ENST00000384662 132 ntBASIC0.24□□□□□ -2.37
XRCC1P18887 Y_RNA.604-201ENST00000410574 102 ntBASIC0.24□□□□□ -2.37
XRCC1P18887 AP003327.1-201ENST00000529684 127 ntBASIC0.24□□□□□ -2.37
XRCC1P18887 AC022523.2-201ENST00000561045 150 ntBASIC0.24□□□□□ -2.37
XRCC1P18887 MIR3678-201ENST00000578455 94 ntBASIC0.24□□□□□ -2.37
XRCC1P18887 MIR3129-201ENST00000581095 76 ntBASIC0.24□□□□□ -2.37
XRCC1P18887 AL365205.2-201ENST00000594586 68 ntBASIC0.24□□□□□ -2.37
XRCC1P18887 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.24□□□□□ -2.37
XRCC1P18887 MIR330-201ENST00000362196 94 ntBASIC0.23□□□□□ -2.37
XRCC1P18887 Y_RNA.11-201ENST00000362375 109 ntBASIC0.23□□□□□ -2.37
XRCC1P18887 SNORD44.1-201ENST00000363202 61 ntBASIC0.23□□□□□ -2.37
XRCC1P18887 Y_RNA.176-201ENST00000363815 109 ntBASIC0.23□□□□□ -2.37
XRCC1P18887 Y_RNA.262-201ENST00000364641 102 ntBASIC0.23□□□□□ -2.37
XRCC1P18887 RNU4-17P-201ENST00000365598 141 ntBASIC0.23□□□□□ -2.37
XRCC1P18887 Y_RNA.518-201ENST00000384552 113 ntBASIC0.23□□□□□ -2.37
XRCC1P18887 RNU4-83P-201ENST00000410863 133 ntBASIC0.23□□□□□ -2.37
XRCC1P18887 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
XRCC1P18887 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
XRCC1P18887 AL662814.1-201ENST00000617364 121 ntBASIC0.23□□□□□ -2.37
XRCC1P18887 MIR8062-201ENST00000621515 85 ntBASIC0.23□□□□□ -2.37
XRCC1P18887 AC091932.4-201ENST00000623386 200 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms