Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 MTATP6P21-201ENST00000440681 189 ntBASIC1.15□□□□□ -2.23
CTPS1P17812 RNU7-21P-201ENST00000459430 62 ntBASIC1.15□□□□□ -2.23
CTPS1P17812 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.15□□□□□ -2.23
CTPS1P17812 RNA5SP236-201ENST00000516169 116 ntBASIC1.15□□□□□ -2.23
CTPS1P17812 MIR8055-201ENST00000610739 97 ntBASIC1.15□□□□□ -2.23
CTPS1P17812 MIR6516-201ENST00000630554 81 ntBASIC1.15□□□□□ -2.23
CTPS1P17812 Z97988.1-201ENST00000637697 135 ntBASIC1.15□□□□□ -2.23
CTPS1P17812 RNU6-613P-201ENST00000410412 108 ntBASIC1.14□□□□□ -2.23
CTPS1P17812 AC090844.1-201ENST00000422019 156 ntBASIC1.14□□□□□ -2.23
CTPS1P17812 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.14□□□□□ -2.23
CTPS1P17812 RNU7-45P-201ENST00000459460 63 ntBASIC1.14□□□□□ -2.23
CTPS1P17812 SNORA25.12-201ENST00000516202 82 ntBASIC1.14□□□□□ -2.23
CTPS1P17812 Y_RNA.215-201ENST00000364204 112 ntBASIC1.13□□□□□ -2.23
CTPS1P17812 RNU6-654P-201ENST00000364373 107 ntBASIC1.13□□□□□ -2.23
CTPS1P17812 SNORD18B-201ENST00000365659 72 ntBASIC1.13□□□□□ -2.23
CTPS1P17812 RNU6-125P-201ENST00000384505 107 ntBASIC1.13□□□□□ -2.23
CTPS1P17812 RNU6-939P-201ENST00000384634 107 ntBASIC1.13□□□□□ -2.23
CTPS1P17812 MRPL35P3-201ENST00000421557 364 ntBASIC1.13□□□□□ -2.23
CTPS1P17812 AC063976.4-201ENST00000421971 163 ntBASIC1.13□□□□□ -2.23
CTPS1P17812 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.13□□□□□ -2.23
CTPS1P17812 RNU7-197P-201ENST00000458836 62 ntBASIC1.13□□□□□ -2.23
CTPS1P17812 RNU7-90P-201ENST00000459216 62 ntBASIC1.13□□□□□ -2.23
CTPS1P17812 RNU6-255P-201ENST00000516957 105 ntBASIC1.13□□□□□ -2.23
CTPS1P17812 RNU2-60P-201ENST00000517290 128 ntBASIC1.13□□□□□ -2.23
CTPS1P17812 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.13□□□□□ -2.23
CTPS1P17812 MIR548X2-201ENST00000579776 100 ntBASIC1.13□□□□□ -2.23
CTPS1P17812 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.13□□□□□ -2.23
CTPS1P17812 AC008163.1-202ENST00000636004 2889 ntBASIC1.13□□□□□ -2.23
CTPS1P17812 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.12□□□□□ -2.23
CTPS1P17812 Y_RNA.120-201ENST00000363304 110 ntBASIC1.12□□□□□ -2.23
CTPS1P17812 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
CTPS1P17812 RNY1P6-201ENST00000384193 109 ntBASIC1.12□□□□□ -2.23
CTPS1P17812 SNORA20-201ENST00000384662 132 ntBASIC1.12□□□□□ -2.23
CTPS1P17812 SNORD38B-201ENST00000384690 67 ntBASIC1.12□□□□□ -2.23
CTPS1P17812 MT-TN-201ENST00000387400 73 ntBASIC1.12□□□□□ -2.23
CTPS1P17812 SNORA26.6-201ENST00000391256 115 ntBASIC1.12□□□□□ -2.23
CTPS1P17812 RNA5SP247-201ENST00000411181 105 ntBASIC1.12□□□□□ -2.23
CTPS1P17812 RNU7-200P-201ENST00000516105 62 ntBASIC1.12□□□□□ -2.23
CTPS1P17812 AP000753.3-201ENST00000604083 169 ntBASIC1.12□□□□□ -2.23
CTPS1P17812 MIR8070-201ENST00000616510 88 ntBASIC1.12□□□□□ -2.23
CTPS1P17812 MIR6717-201ENST00000622747 73 ntBASIC1.12□□□□□ -2.23
CTPS1P17812 SNORD38B-202ENST00000625943 69 ntBASIC1.12□□□□□ -2.23
CTPS1P17812 RNU4-16P-201ENST00000364737 141 ntBASIC1.11□□□□□ -2.23
CTPS1P17812 RNU6-1319P-201ENST00000390855 104 ntBASIC1.11□□□□□ -2.23
CTPS1P17812 RNU6-747P-201ENST00000390928 104 ntBASIC1.11□□□□□ -2.23
CTPS1P17812 RNU6-241P-201ENST00000391148 104 ntBASIC1.11□□□□□ -2.23
CTPS1P17812 RNU6-460P-201ENST00000391158 108 ntBASIC1.11□□□□□ -2.23
CTPS1P17812 RNU6-602P-201ENST00000411155 105 ntBASIC1.11□□□□□ -2.23
CTPS1P17812 RNU6-177P-201ENST00000411257 104 ntBASIC1.11□□□□□ -2.23
CTPS1P17812 RPS3AP1-201ENST00000413190 320 ntBASIC1.11□□□□□ -2.23
CTPS1P17812 RPS23P4-201ENST00000487908 423 ntBASIC1.11□□□□□ -2.23
CTPS1P17812 Y_RNA.686-201ENST00000516548 134 ntBASIC1.11□□□□□ -2.23
CTPS1P17812 MIR3152-201ENST00000579801 74 ntBASIC1.11□□□□□ -2.23
CTPS1P17812 MIR4264-201ENST00000583520 66 ntBASIC1.11□□□□□ -2.23
CTPS1P17812 AC021613.1-201ENST00000623880 111 ntBASIC1.11□□□□□ -2.23
CTPS1P17812 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CTPS1P17812 MIR377-201ENST00000362145 69 ntBASIC1.1□□□□□ -2.23
CTPS1P17812 SNORA25.9-201ENST00000365087 128 ntBASIC1.1□□□□□ -2.23
CTPS1P17812 MIR569-201ENST00000385228 96 ntBASIC1.1□□□□□ -2.23
CTPS1P17812 RNA5SP95-201ENST00000410319 137 ntBASIC1.1□□□□□ -2.23
CTPS1P17812 AC002429.1-201ENST00000437672 148 ntBASIC1.1□□□□□ -2.23
CTPS1P17812 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
CTPS1P17812 Y_RNA.690-201ENST00000516603 95 ntBASIC1.1□□□□□ -2.23
CTPS1P17812 AC023827.1-201ENST00000569247 97 ntBASIC1.1□□□□□ -2.23
CTPS1P17812 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
CTPS1P17812 RNU6-915P-201ENST00000364943 103 ntBASIC1.09□□□□□ -2.23
CTPS1P17812 RNY1P5-201ENST00000383890 115 ntBASIC1.09□□□□□ -2.23
CTPS1P17812 Y_RNA.488-201ENST00000384403 102 ntBASIC1.09□□□□□ -2.23
CTPS1P17812 MIR19B1-201ENST00000384829 87 ntBASIC1.09□□□□□ -2.23
CTPS1P17812 RNU6-205P-201ENST00000390858 107 ntBASIC1.09□□□□□ -2.23
CTPS1P17812 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
CTPS1P17812 HSPE1P19-201ENST00000603327 295 ntBASIC1.09□□□□□ -2.23
CTPS1P17812 AC011603.4-201ENST00000611325 277 ntBASIC1.09□□□□□ -2.23
CTPS1P17812 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CTPS1P17812 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
CTPS1P17812 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.08□□□□□ -2.24
CTPS1P17812 RNU6-349P-201ENST00000362402 107 ntBASIC1.08□□□□□ -2.24
CTPS1P17812 Y_RNA.168-201ENST00000363740 102 ntBASIC1.08□□□□□ -2.24
CTPS1P17812 Y_RNA.226-201ENST00000364337 114 ntBASIC1.08□□□□□ -2.24
CTPS1P17812 RNU6-690P-201ENST00000365242 106 ntBASIC1.08□□□□□ -2.24
CTPS1P17812 Y_RNA.354-201ENST00000365448 111 ntBASIC1.08□□□□□ -2.24
CTPS1P17812 RNU6-1062P-201ENST00000383908 107 ntBASIC1.08□□□□□ -2.24
CTPS1P17812 Y_RNA.420-201ENST00000384043 110 ntBASIC1.08□□□□□ -2.24
CTPS1P17812 Y_RNA.430-201ENST00000384081 110 ntBASIC1.08□□□□□ -2.24
CTPS1P17812 SNORA2B-201ENST00000384583 137 ntBASIC1.08□□□□□ -2.24
CTPS1P17812 AL603914.1-201ENST00000401964 204 ntBASIC1.08□□□□□ -2.24
CTPS1P17812 AC244023.1-201ENST00000426884 112 ntBASIC1.08□□□□□ -2.24
CTPS1P17812 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
CTPS1P17812 AC036111.3-201ENST00000526389 112 ntBASIC1.08□□□□□ -2.24
CTPS1P17812 AC242498.1-201ENST00000604134 111 ntBASIC1.08□□□□□ -2.24
CTPS1P17812 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
CTPS1P17812 SNORA22.1-201ENST00000362701 134 ntBASIC1.07□□□□□ -2.24
CTPS1P17812 SNORD114-27-201ENST00000363766 70 ntBASIC1.07□□□□□ -2.24
CTPS1P17812 Y_RNA.506-201ENST00000384494 102 ntBASIC1.07□□□□□ -2.24
CTPS1P17812 MIR1287-201ENST00000408492 90 ntBASIC1.07□□□□□ -2.24
CTPS1P17812 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
CTPS1P17812 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.07□□□□□ -2.24
CTPS1P17812 AC106800.4-201ENST00000614905 153 ntBASIC1.07□□□□□ -2.24
CTPS1P17812 MIR6841-201ENST00000637129 72 ntBASIC1.07□□□□□ -2.24
CTPS1P17812 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms