Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RNU6-580P-201ENST00000365159 107 ntBASIC0.65□□□□□ -2.31
TOP1P11387 Y_RNA.435-201ENST00000384095 112 ntBASIC0.65□□□□□ -2.31
TOP1P11387 RNU7-73P-201ENST00000458743 63 ntBASIC0.65□□□□□ -2.31
TOP1P11387 RNU7-67P-201ENST00000459003 62 ntBASIC0.65□□□□□ -2.31
TOP1P11387 snoU13.16-201ENST00000459350 104 ntBASIC0.65□□□□□ -2.31
TOP1P11387 RPS29P24-201ENST00000486345 171 ntBASIC0.65□□□□□ -2.31
TOP1P11387 Y_RNA.797-201ENST00000515977 94 ntBASIC0.65□□□□□ -2.31
TOP1P11387 MRPS18CP4-201ENST00000535821 231 ntBASIC0.65□□□□□ -2.31
TOP1P11387 MIR378D2-201ENST00000580636 98 ntBASIC0.65□□□□□ -2.31
TOP1P11387 AL365205.2-201ENST00000594586 68 ntBASIC0.65□□□□□ -2.31
TOP1P11387 Y_RNA.75-201ENST00000362927 97 ntBASIC0.64□□□□□ -2.31
TOP1P11387 Y_RNA.182-201ENST00000363880 111 ntBASIC0.64□□□□□ -2.31
TOP1P11387 RNU6-275P-201ENST00000364910 107 ntBASIC0.64□□□□□ -2.31
TOP1P11387 RNU6-1292P-201ENST00000383856 107 ntBASIC0.64□□□□□ -2.31
TOP1P11387 RNU6-1189P-201ENST00000383958 107 ntBASIC0.64□□□□□ -2.31
TOP1P11387 Y_RNA.542-201ENST00000384641 111 ntBASIC0.64□□□□□ -2.31
TOP1P11387 RNU6-1190P-201ENST00000410811 104 ntBASIC0.64□□□□□ -2.31
TOP1P11387 AL035398.1-201ENST00000430869 322 ntBASIC0.64□□□□□ -2.31
TOP1P11387 HMGN1P33-201ENST00000432945 451 ntBASIC0.64□□□□□ -2.31
TOP1P11387 AC092628.1-201ENST00000436250 252 ntBASIC0.64□□□□□ -2.31
TOP1P11387 AL138752.1-201ENST00000452964 351 ntBASIC0.64□□□□□ -2.31
TOP1P11387 AC107297.1-201ENST00000459991 176 ntBASIC0.64□□□□□ -2.31
TOP1P11387 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.64□□□□□ -2.31
TOP1P11387 RNU6-998P-201ENST00000515894 101 ntBASIC0.64□□□□□ -2.31
TOP1P11387 RNU6-1271P-201ENST00000517049 105 ntBASIC0.64□□□□□ -2.31
TOP1P11387 AC022559.1-201ENST00000520905 205 ntBASIC0.64□□□□□ -2.31
TOP1P11387 AC141273.2-201ENST00000618989 130 ntBASIC0.64□□□□□ -2.31
TOP1P11387 AC078938.1-201ENST00000620993 318 ntBASIC0.64□□□□□ -2.31
TOP1P11387 Z97988.1-201ENST00000637697 135 ntBASIC0.64□□□□□ -2.31
TOP1P11387 RNU6-369P-201ENST00000362515 102 ntBASIC0.63□□□□□ -2.31
TOP1P11387 SNORD113.3-201ENST00000364630 78 ntBASIC0.63□□□□□ -2.31
TOP1P11387 RNU6-396P-201ENST00000365369 105 ntBASIC0.63□□□□□ -2.31
TOP1P11387 Y_RNA.401-201ENST00000383965 117 ntBASIC0.63□□□□□ -2.31
TOP1P11387 Y_RNA.489-201ENST00000384410 101 ntBASIC0.63□□□□□ -2.31
TOP1P11387 RNU4-70P-201ENST00000384579 139 ntBASIC0.63□□□□□ -2.31
TOP1P11387 MIR598-201ENST00000384868 97 ntBASIC0.63□□□□□ -2.31
TOP1P11387 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
TOP1P11387 SNORA26.6-201ENST00000391256 115 ntBASIC0.63□□□□□ -2.31
TOP1P11387 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.63□□□□□ -2.31
TOP1P11387 Y_RNA.618-201ENST00000410949 107 ntBASIC0.63□□□□□ -2.31
TOP1P11387 snoU13.21-201ENST00000459368 105 ntBASIC0.63□□□□□ -2.31
TOP1P11387 AC113410.1-201ENST00000505029 247 ntBASIC0.63□□□□□ -2.31
TOP1P11387 SCARNA15-202ENST00000516881 127 ntBASIC0.63□□□□□ -2.31
TOP1P11387 RNU6-388P-201ENST00000517012 105 ntBASIC0.63□□□□□ -2.31
TOP1P11387 RNU6-389P-201ENST00000517048 105 ntBASIC0.63□□□□□ -2.31
TOP1P11387 MIR5197-201ENST00000583721 112 ntBASIC0.63□□□□□ -2.31
TOP1P11387 RNU6-94P-201ENST00000607728 107 ntBASIC0.63□□□□□ -2.31
TOP1P11387 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.63□□□□□ -2.31
TOP1P11387 Y_RNA.168-201ENST00000363740 102 ntBASIC0.62□□□□□ -2.31
TOP1P11387 RNU6-1335P-201ENST00000365426 107 ntBASIC0.62□□□□□ -2.31
TOP1P11387 RNU6-1336P-201ENST00000383886 109 ntBASIC0.62□□□□□ -2.31
TOP1P11387 RNU6-643P-201ENST00000384018 107 ntBASIC0.62□□□□□ -2.31
TOP1P11387 MT-TN-201ENST00000387400 73 ntBASIC0.62□□□□□ -2.31
TOP1P11387 SNORD111-201ENST00000408139 94 ntBASIC0.62□□□□□ -2.31
TOP1P11387 RNU2-11P-201ENST00000459191 187 ntBASIC0.62□□□□□ -2.31
TOP1P11387 RNU7-45P-201ENST00000459460 63 ntBASIC0.62□□□□□ -2.31
TOP1P11387 RNU7-96P-201ENST00000459535 64 ntBASIC0.62□□□□□ -2.31
TOP1P11387 RNU6-1219P-201ENST00000516143 112 ntBASIC0.62□□□□□ -2.31
TOP1P11387 SNORD116-25-201ENST00000516517 92 ntBASIC0.62□□□□□ -2.31
TOP1P11387 MIR2115-201ENST00000516657 100 ntBASIC0.62□□□□□ -2.31
TOP1P11387 Z83818.1-201ENST00000603584 150 ntBASIC0.62□□□□□ -2.31
TOP1P11387 uc_338.6-201ENST00000613544 171 ntBASIC0.62□□□□□ -2.31
TOP1P11387 PVT1_3.1-201ENST00000620853 95 ntBASIC0.62□□□□□ -2.31
TOP1P11387 Y_RNA.351-201ENST00000365436 96 ntBASIC0.61□□□□□ -2.31
TOP1P11387 RNU6-205P-201ENST00000390858 107 ntBASIC0.61□□□□□ -2.31
TOP1P11387 SNORA79-201ENST00000408376 140 ntBASIC0.61□□□□□ -2.31
TOP1P11387 RNU6-602P-201ENST00000411155 105 ntBASIC0.61□□□□□ -2.31
TOP1P11387 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
TOP1P11387 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.61□□□□□ -2.31
TOP1P11387 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
TOP1P11387 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.6□□□□□ -2.31
TOP1P11387 MIR377-201ENST00000362145 69 ntBASIC0.6□□□□□ -2.31
TOP1P11387 RNU6-1020P-201ENST00000363684 107 ntBASIC0.6□□□□□ -2.31
TOP1P11387 Y_RNA.233-201ENST00000364407 101 ntBASIC0.6□□□□□ -2.31
TOP1P11387 Y_RNA.297-201ENST00000364950 91 ntBASIC0.6□□□□□ -2.31
TOP1P11387 SNORA2B-201ENST00000384583 137 ntBASIC0.6□□□□□ -2.31
TOP1P11387 MIR624-201ENST00000385217 97 ntBASIC0.6□□□□□ -2.31
TOP1P11387 MIR936-201ENST00000401264 98 ntBASIC0.6□□□□□ -2.31
TOP1P11387 AC098934.3-201ENST00000430450 190 ntBASIC0.6□□□□□ -2.31
TOP1P11387 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.6□□□□□ -2.31
TOP1P11387 AL157398.1-201ENST00000452981 186 ntBASIC0.6□□□□□ -2.31
TOP1P11387 Y_RNA.644-201ENST00000459006 113 ntBASIC0.6□□□□□ -2.31
TOP1P11387 Y_RNA.674-201ENST00000516362 113 ntBASIC0.6□□□□□ -2.31
TOP1P11387 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
TOP1P11387 RNU7-53P-201ENST00000516705 60 ntBASIC0.6□□□□□ -2.31
TOP1P11387 MIR4431-201ENST00000579990 94 ntBASIC0.6□□□□□ -2.31
TOP1P11387 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
TOP1P11387 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
TOP1P11387 MIR342-201ENST00000362212 99 ntBASIC0.59□□□□□ -2.31
TOP1P11387 RNU6-1082P-201ENST00000364574 107 ntBASIC0.59□□□□□ -2.31
TOP1P11387 RNU6-312P-201ENST00000364629 107 ntBASIC0.59□□□□□ -2.31
TOP1P11387 RNU6-200P-201ENST00000364743 107 ntBASIC0.59□□□□□ -2.31
TOP1P11387 RNU6-597P-201ENST00000365620 102 ntBASIC0.59□□□□□ -2.31
TOP1P11387 MIR548I3-201ENST00000408378 149 ntBASIC0.59□□□□□ -2.31
TOP1P11387 SEPT7P4-201ENST00000437076 306 ntBASIC0.59□□□□□ -2.31
TOP1P11387 RNU6-138P-201ENST00000515952 107 ntBASIC0.59□□□□□ -2.31
TOP1P11387 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.59□□□□□ -2.31
TOP1P11387 AC025627.3-201ENST00000582078 182 ntBASIC0.59□□□□□ -2.31
TOP1P11387 MIR4264-201ENST00000583520 66 ntBASIC0.59□□□□□ -2.31
TOP1P11387 MIR6740-201ENST00000618268 113 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms