Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MIR6841-201ENST00000637129 72 ntBASIC-1.15□□□□□ -2.59
APOEP02649 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.16□□□□□ -2.6
APOEP02649 RNY1P7-201ENST00000384743 110 ntBASIC-1.16□□□□□ -2.6
APOEP02649 RNU6-763P-201ENST00000390865 106 ntBASIC-1.16□□□□□ -2.6
APOEP02649 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.16□□□□□ -2.6
APOEP02649 RNU6-397P-201ENST00000516226 104 ntBASIC-1.16□□□□□ -2.6
APOEP02649 RNA5SP66-201ENST00000517178 101 ntBASIC-1.16□□□□□ -2.6
APOEP02649 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.16□□□□□ -2.6
APOEP02649 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.16□□□□□ -2.6
APOEP02649 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.16□□□□□ -2.6
APOEP02649 AC138305.3-201ENST00000624988 240 ntBASIC-1.16□□□□□ -2.6
APOEP02649 SNORA22.1-201ENST00000362701 134 ntBASIC-1.17□□□□□ -2.6
APOEP02649 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.17□□□□□ -2.6
APOEP02649 RNU6-509P-201ENST00000363519 107 ntBASIC-1.17□□□□□ -2.6
APOEP02649 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.17□□□□□ -2.6
APOEP02649 MIR3908-201ENST00000579798 126 ntBASIC-1.17□□□□□ -2.6
APOEP02649 MIR3681-201ENST00000580089 72 ntBASIC-1.17□□□□□ -2.6
APOEP02649 MIR376A2-201ENST00000636782 80 ntBASIC-1.17□□□□□ -2.6
APOEP02649 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.18□□□□□ -2.6
APOEP02649 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.18□□□□□ -2.6
APOEP02649 SNORA20-201ENST00000384662 132 ntBASIC-1.18□□□□□ -2.6
APOEP02649 MIR196A1-201ENST00000388006 70 ntBASIC-1.18□□□□□ -2.6
APOEP02649 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.18□□□□□ -2.6
APOEP02649 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.18□□□□□ -2.6
APOEP02649 RNU6-911P-201ENST00000516523 104 ntBASIC-1.18□□□□□ -2.6
APOEP02649 RNU7-188P-201ENST00000517063 64 ntBASIC-1.18□□□□□ -2.6
APOEP02649 AC091932.4-201ENST00000623386 200 ntBASIC-1.18□□□□□ -2.6
APOEP02649 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.18□□□□□ -2.6
APOEP02649 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.19□□□□□ -2.6
APOEP02649 RNU6-21P-201ENST00000384710 107 ntBASIC-1.19□□□□□ -2.6
APOEP02649 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.19□□□□□ -2.6
APOEP02649 MTCO2P24-201ENST00000515611 426 ntBASIC-1.19□□□□□ -2.6
APOEP02649 RNU6-506P-201ENST00000516553 94 ntBASIC-1.19□□□□□ -2.6
APOEP02649 AP003733.2-201ENST00000529409 171 ntBASIC-1.19□□□□□ -2.6
APOEP02649 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.19□□□□□ -2.6
APOEP02649 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.19□□□□□ -2.6
APOEP02649 AC078883.4-201ENST00000623218 367 ntBASIC-1.19□□□□□ -2.6
APOEP02649 MIR367-201ENST00000362299 68 ntBASIC-1.2□□□□□ -2.6
APOEP02649 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.2□□□□□ -2.6
APOEP02649 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.2□□□□□ -2.6
APOEP02649 RNY4P3-201ENST00000365254 95 ntBASIC-1.2□□□□□ -2.6
APOEP02649 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.2□□□□□ -2.6
APOEP02649 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.2□□□□□ -2.6
APOEP02649 RNU4-63P-201ENST00000411313 118 ntBASIC-1.2□□□□□ -2.6
APOEP02649 MTND1P14-201ENST00000427400 950 ntBASIC-1.2□□□□□ -2.6
APOEP02649 RNU7-79P-201ENST00000516082 62 ntBASIC-1.2□□□□□ -2.6
APOEP02649 RNU6-191P-201ENST00000516295 94 ntBASIC-1.2□□□□□ -2.6
APOEP02649 AP001328.1-201ENST00000528550 176 ntBASIC-1.2□□□□□ -2.6
APOEP02649 MIR3974-201ENST00000637126 96 ntBASIC-1.2□□□□□ -2.6
APOEP02649 RNY4P14-201ENST00000363656 96 ntBASIC-1.21□□□□□ -2.6
APOEP02649 RNU6-937P-201ENST00000384325 106 ntBASIC-1.21□□□□□ -2.6
APOEP02649 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.21□□□□□ -2.6
APOEP02649 RNU7-80P-201ENST00000459562 61 ntBASIC-1.21□□□□□ -2.6
APOEP02649 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.21□□□□□ -2.6
APOEP02649 RNA5SP169-201ENST00000517268 117 ntBASIC-1.21□□□□□ -2.6
APOEP02649 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.21□□□□□ -2.6
APOEP02649 RNU6-510P-201ENST00000391239 108 ntBASIC-1.22□□□□□ -2.6
APOEP02649 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.22□□□□□ -2.6
APOEP02649 RNU6-126P-201ENST00000516685 103 ntBASIC-1.22□□□□□ -2.6
APOEP02649 MIR4724-201ENST00000579485 89 ntBASIC-1.22□□□□□ -2.6
APOEP02649 MIR4473-201ENST00000583731 91 ntBASIC-1.22□□□□□ -2.6
APOEP02649 MIR4760-201ENST00000585040 80 ntBASIC-1.22□□□□□ -2.6
APOEP02649 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.22□□□□□ -2.6
APOEP02649 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.23□□□□□ -2.61
APOEP02649 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.23□□□□□ -2.61
APOEP02649 RNY1P2-201ENST00000364820 117 ntBASIC-1.23□□□□□ -2.61
APOEP02649 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.23□□□□□ -2.61
APOEP02649 MTND3P8-201ENST00000412909 339 ntBASIC-1.23□□□□□ -2.61
APOEP02649 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.23□□□□□ -2.61
APOEP02649 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.23□□□□□ -2.61
APOEP02649 AC013791.1-201ENST00000616619 62 ntBASIC-1.23□□□□□ -2.61
APOEP02649 AC021613.1-201ENST00000623880 111 ntBASIC-1.23□□□□□ -2.61
APOEP02649 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.24□□□□□ -2.61
APOEP02649 RNU6-47P-201ENST00000383866 107 ntBASIC-1.24□□□□□ -2.61
APOEP02649 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.24□□□□□ -2.61
APOEP02649 RNU6-455P-201ENST00000384681 107 ntBASIC-1.24□□□□□ -2.61
APOEP02649 SNORD83B-201ENST00000386745 93 ntBASIC-1.24□□□□□ -2.61
APOEP02649 MIR548H5-201ENST00000580314 60 ntBASIC-1.24□□□□□ -2.61
APOEP02649 RNY3-201ENST00000365484 102 ntBASIC-1.25□□□□□ -2.61
APOEP02649 RNU6-310P-201ENST00000384655 107 ntBASIC-1.25□□□□□ -2.61
APOEP02649 RNU2-16P-201ENST00000410712 136 ntBASIC-1.25□□□□□ -2.61
APOEP02649 RNU4-14P-201ENST00000410858 122 ntBASIC-1.25□□□□□ -2.61
APOEP02649 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.25□□□□□ -2.61
APOEP02649 RNU6-764P-201ENST00000516396 105 ntBASIC-1.25□□□□□ -2.61
APOEP02649 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.25□□□□□ -2.61
APOEP02649 AC093726.3-201ENST00000637588 150 ntBASIC-1.25□□□□□ -2.61
APOEP02649 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.26□□□□□ -2.61
APOEP02649 RNU6-890P-201ENST00000384121 107 ntBASIC-1.26□□□□□ -2.61
APOEP02649 SNORD63-201ENST00000384262 68 ntBASIC-1.26□□□□□ -2.61
APOEP02649 MIR599-201ENST00000385069 95 ntBASIC-1.26□□□□□ -2.61
APOEP02649 snoU13.19-201ENST00000459148 104 ntBASIC-1.26□□□□□ -2.61
APOEP02649 MIR548AX-201ENST00000580117 73 ntBASIC-1.26□□□□□ -2.61
APOEP02649 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.27□□□□□ -2.61
APOEP02649 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.27□□□□□ -2.61
APOEP02649 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.27□□□□□ -2.61
APOEP02649 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.27□□□□□ -2.61
APOEP02649 MIR181B2-201ENST00000385004 89 ntBASIC-1.27□□□□□ -2.61
APOEP02649 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.27□□□□□ -2.61
APOEP02649 MIR5692C2-201ENST00000577959 77 ntBASIC-1.27□□□□□ -2.61
APOEP02649 VN1R91P-201ENST00000594377 169 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 281.8 ms