Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 RNU6-165P-201ENST00000517170 99 ntBASIC0.92□□□□□ -2.26
KRT6AP02538 MIR4661-201ENST00000582720 75 ntBASIC0.92□□□□□ -2.26
KRT6AP02538 snoU13.31-201ENST00000607291 104 ntBASIC0.92□□□□□ -2.26
KRT6AP02538 AC011603.4-201ENST00000611325 277 ntBASIC0.92□□□□□ -2.26
KRT6AP02538 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.92□□□□□ -2.26
KRT6AP02538 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
KRT6AP02538 Y_RNA.327-201ENST00000365201 102 ntBASIC0.91□□□□□ -2.26
KRT6AP02538 SNORD113-1-201ENST00000365321 69 ntBASIC0.91□□□□□ -2.26
KRT6AP02538 Y_RNA.494-201ENST00000384432 111 ntBASIC0.91□□□□□ -2.26
KRT6AP02538 Y_RNA.537-201ENST00000384626 109 ntBASIC0.91□□□□□ -2.26
KRT6AP02538 RNU6-959P-201ENST00000384671 107 ntBASIC0.91□□□□□ -2.26
KRT6AP02538 MIR520C-201ENST00000385005 87 ntBASIC0.91□□□□□ -2.26
KRT6AP02538 SNORD28B-201ENST00000390993 75 ntBASIC0.91□□□□□ -2.26
KRT6AP02538 RNU6-998P-201ENST00000515894 101 ntBASIC0.91□□□□□ -2.26
KRT6AP02538 RNU2-13P-201ENST00000515909 113 ntBASIC0.91□□□□□ -2.26
KRT6AP02538 SNORA31.2-201ENST00000516019 134 ntBASIC0.91□□□□□ -2.26
KRT6AP02538 RNU6-113P-201ENST00000516653 101 ntBASIC0.91□□□□□ -2.26
KRT6AP02538 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.91□□□□□ -2.26
KRT6AP02538 MIR3121-201ENST00000579680 77 ntBASIC0.91□□□□□ -2.26
KRT6AP02538 MIR4764-201ENST00000580680 88 ntBASIC0.91□□□□□ -2.26
KRT6AP02538 AL357312.1-201ENST00000603879 298 ntBASIC0.91□□□□□ -2.26
KRT6AP02538 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.91□□□□□ -2.26
KRT6AP02538 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.91□□□□□ -2.26
KRT6AP02538 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.9□□□□□ -2.26
KRT6AP02538 AL157777.2-201ENST00000258070 137 ntBASIC0.9□□□□□ -2.27
KRT6AP02538 RNU6-309P-201ENST00000364573 106 ntBASIC0.9□□□□□ -2.27
KRT6AP02538 RNU1-133P-201ENST00000364867 167 ntBASIC0.9□□□□□ -2.27
KRT6AP02538 SNORA24-201ENST00000384096 131 ntBASIC0.9□□□□□ -2.27
KRT6AP02538 SNORD41-201ENST00000386967 70 ntBASIC0.9□□□□□ -2.27
KRT6AP02538 RNU7-67P-201ENST00000459003 62 ntBASIC0.9□□□□□ -2.27
KRT6AP02538 RNU6-1211P-201ENST00000459179 105 ntBASIC0.9□□□□□ -2.27
KRT6AP02538 RNU7-53P-201ENST00000516705 60 ntBASIC0.9□□□□□ -2.27
KRT6AP02538 RNU6-971P-201ENST00000516920 106 ntBASIC0.9□□□□□ -2.27
KRT6AP02538 MIR4498-201ENST00000577599 66 ntBASIC0.9□□□□□ -2.27
KRT6AP02538 MIR4791-201ENST00000607666 84 ntBASIC0.9□□□□□ -2.27
KRT6AP02538 GHRLOS.1-201ENST00000610995 70 ntBASIC0.9□□□□□ -2.27
KRT6AP02538 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
KRT6AP02538 AC243994.1-201ENST00000618627 109 ntBASIC0.9□□□□□ -2.27
KRT6AP02538 AC091932.4-201ENST00000623386 200 ntBASIC0.9□□□□□ -2.27
KRT6AP02538 AL596211.1-201ENST00000569873 2277 ntBASIC0.89□□□□□ -2.27
KRT6AP02538 MIR302B-201ENST00000362188 73 ntBASIC0.89□□□□□ -2.27
KRT6AP02538 MIR342-201ENST00000362212 99 ntBASIC0.89□□□□□ -2.27
KRT6AP02538 RNU6-647P-201ENST00000364243 107 ntBASIC0.89□□□□□ -2.27
KRT6AP02538 Y_RNA.280-201ENST00000364765 112 ntBASIC0.89□□□□□ -2.27
KRT6AP02538 RNU6-1117P-201ENST00000384525 104 ntBASIC0.89□□□□□ -2.27
KRT6AP02538 SNORA19-201ENST00000384737 128 ntBASIC0.89□□□□□ -2.27
KRT6AP02538 RNU6-910P-201ENST00000390844 107 ntBASIC0.89□□□□□ -2.27
KRT6AP02538 POLR2J4-204ENST00000418424 324 ntBASIC0.89□□□□□ -2.27
KRT6AP02538 AL035398.1-201ENST00000430869 322 ntBASIC0.89□□□□□ -2.27
KRT6AP02538 Y_RNA.651-201ENST00000459380 103 ntBASIC0.89□□□□□ -2.27
KRT6AP02538 AC048334.1-201ENST00000477975 159 ntBASIC0.89□□□□□ -2.27
KRT6AP02538 RNU5E-3P-201ENST00000515913 68 ntBASIC0.89□□□□□ -2.27
KRT6AP02538 SNORD111.1-201ENST00000516421 86 ntBASIC0.89□□□□□ -2.27
KRT6AP02538 AC008133.2-201ENST00000624540 351 ntBASIC0.89□□□□□ -2.27
KRT6AP02538 U2.22-201ENST00000636441 106 ntBASIC0.89□□□□□ -2.27
KRT6AP02538 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
KRT6AP02538 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
KRT6AP02538 RNU6-508P-201ENST00000363231 103 ntBASIC0.88□□□□□ -2.27
KRT6AP02538 Y_RNA.114-201ENST00000363265 113 ntBASIC0.88□□□□□ -2.27
KRT6AP02538 Y_RNA.338-201ENST00000365320 114 ntBASIC0.88□□□□□ -2.27
KRT6AP02538 RNU6-53P-201ENST00000365367 106 ntBASIC0.88□□□□□ -2.27
KRT6AP02538 RNY1P6-201ENST00000384193 109 ntBASIC0.88□□□□□ -2.27
KRT6AP02538 RNU6-80P-201ENST00000384195 107 ntBASIC0.88□□□□□ -2.27
KRT6AP02538 SNORA51.10-201ENST00000384418 136 ntBASIC0.88□□□□□ -2.27
KRT6AP02538 MIR570-201ENST00000384917 97 ntBASIC0.88□□□□□ -2.27
KRT6AP02538 AC063976.4-201ENST00000421971 163 ntBASIC0.88□□□□□ -2.27
KRT6AP02538 AL606753.1-201ENST00000427435 87 ntBASIC0.88□□□□□ -2.27
KRT6AP02538 AL158147.1-201ENST00000443970 75 ntBASIC0.88□□□□□ -2.27
KRT6AP02538 RNU7-73P-201ENST00000458743 63 ntBASIC0.88□□□□□ -2.27
KRT6AP02538 RNU2-11P-201ENST00000459191 187 ntBASIC0.88□□□□□ -2.27
KRT6AP02538 snoU13.16-201ENST00000459350 104 ntBASIC0.88□□□□□ -2.27
KRT6AP02538 RNU6-958P-201ENST00000516995 106 ntBASIC0.88□□□□□ -2.27
KRT6AP02538 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.88□□□□□ -2.27
KRT6AP02538 RNU6-349P-201ENST00000362402 107 ntBASIC0.87□□□□□ -2.27
KRT6AP02538 Y_RNA.71-201ENST00000362892 104 ntBASIC0.87□□□□□ -2.27
KRT6AP02538 RNA5SP48-201ENST00000363969 126 ntBASIC0.87□□□□□ -2.27
KRT6AP02538 Y_RNA.294-201ENST00000364916 102 ntBASIC0.87□□□□□ -2.27
KRT6AP02538 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.87□□□□□ -2.27
KRT6AP02538 RPL39P39-201ENST00000455840 151 ntBASIC0.87□□□□□ -2.27
KRT6AP02538 AC108729.3-201ENST00000513484 108 ntBASIC0.87□□□□□ -2.27
KRT6AP02538 RNU6-62P-201ENST00000516526 102 ntBASIC0.87□□□□□ -2.27
KRT6AP02538 MIR4251-201ENST00000635819 61 ntBASIC0.87□□□□□ -2.27
KRT6AP02538 Y_RNA.218-201ENST00000364218 104 ntBASIC0.86□□□□□ -2.27
KRT6AP02538 RNU6-690P-201ENST00000365242 106 ntBASIC0.86□□□□□ -2.27
KRT6AP02538 SNORD116-14-201ENST00000383894 92 ntBASIC0.86□□□□□ -2.27
KRT6AP02538 SNORD116-17-201ENST00000383929 92 ntBASIC0.86□□□□□ -2.27
KRT6AP02538 SNORD116-15-201ENST00000384445 92 ntBASIC0.86□□□□□ -2.27
KRT6AP02538 SNORD116-19-201ENST00000384729 92 ntBASIC0.86□□□□□ -2.27
KRT6AP02538 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
KRT6AP02538 RNA5SP261-201ENST00000410536 106 ntBASIC0.86□□□□□ -2.27
KRT6AP02538 AC008267.6-201ENST00000441664 139 ntBASIC0.86□□□□□ -2.27
KRT6AP02538 RNU7-41P-201ENST00000515917 61 ntBASIC0.86□□□□□ -2.27
KRT6AP02538 AL096861.1-201ENST00000610899 123 ntBASIC0.86□□□□□ -2.27
KRT6AP02538 RNU6-235P-201ENST00000362644 107 ntBASIC0.85□□□□□ -2.27
KRT6AP02538 Y_RNA.127-201ENST00000363386 109 ntBASIC0.85□□□□□ -2.27
KRT6AP02538 RNU6-392P-201ENST00000364926 101 ntBASIC0.85□□□□□ -2.27
KRT6AP02538 RNU6-22P-201ENST00000384355 107 ntBASIC0.85□□□□□ -2.27
KRT6AP02538 MIR19B1-201ENST00000384829 87 ntBASIC0.85□□□□□ -2.27
KRT6AP02538 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
KRT6AP02538 RNU6-1319P-201ENST00000390855 104 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms