Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 SNORD105-201ENST00000386910 85 ntBASIC0.57□□□□□ -2.32
PGK1P00558 SNORA26-201ENST00000391286 122 ntBASIC0.57□□□□□ -2.32
PGK1P00558 MIR548I3-201ENST00000408378 149 ntBASIC0.57□□□□□ -2.32
PGK1P00558 RNU6-602P-201ENST00000411155 105 ntBASIC0.57□□□□□ -2.32
PGK1P00558 MTND2P23-201ENST00000422990 651 ntBASIC0.57□□□□□ -2.32
PGK1P00558 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.57□□□□□ -2.32
PGK1P00558 U6.104-201ENST00000637979 90 ntBASIC0.57□□□□□ -2.32
PGK1P00558 Y_RNA.54-201ENST00000362766 105 ntBASIC0.56□□□□□ -2.32
PGK1P00558 RNA5SP257-201ENST00000363023 116 ntBASIC0.56□□□□□ -2.32
PGK1P00558 Y_RNA.539-201ENST00000384635 107 ntBASIC0.56□□□□□ -2.32
PGK1P00558 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
PGK1P00558 AC114737.2-201ENST00000421583 173 ntBASIC0.56□□□□□ -2.32
PGK1P00558 RNU7-62P-201ENST00000458856 62 ntBASIC0.56□□□□□ -2.32
PGK1P00558 RNU7-96P-201ENST00000459535 64 ntBASIC0.56□□□□□ -2.32
PGK1P00558 SCARNA15.1-201ENST00000516384 125 ntBASIC0.56□□□□□ -2.32
PGK1P00558 RNA5SP121-201ENST00000516537 101 ntBASIC0.56□□□□□ -2.32
PGK1P00558 RNU7-53P-201ENST00000516705 60 ntBASIC0.56□□□□□ -2.32
PGK1P00558 AC243829.6-201ENST00000612652 106 ntBASIC0.56□□□□□ -2.32
PGK1P00558 Y_RNA.199-201ENST00000364014 102 ntBASIC0.55□□□□□ -2.32
PGK1P00558 Y_RNA.262-201ENST00000364641 102 ntBASIC0.55□□□□□ -2.32
PGK1P00558 Y_RNA.292-201ENST00000364904 97 ntBASIC0.55□□□□□ -2.32
PGK1P00558 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
PGK1P00558 RNU6-1189P-201ENST00000383958 107 ntBASIC0.55□□□□□ -2.32
PGK1P00558 RNY1P8-201ENST00000383970 114 ntBASIC0.55□□□□□ -2.32
PGK1P00558 Y_RNA.410-201ENST00000383992 113 ntBASIC0.55□□□□□ -2.32
PGK1P00558 SNORA26.6-201ENST00000391256 115 ntBASIC0.55□□□□□ -2.32
PGK1P00558 RNU4-43P-201ENST00000410628 137 ntBASIC0.55□□□□□ -2.32
PGK1P00558 RNU2-11P-201ENST00000459191 187 ntBASIC0.55□□□□□ -2.32
PGK1P00558 RNY3P16-201ENST00000516338 101 ntBASIC0.55□□□□□ -2.32
PGK1P00558 MIR4771-2-201ENST00000577758 74 ntBASIC0.55□□□□□ -2.32
PGK1P00558 MIR4771-1-201ENST00000582617 74 ntBASIC0.55□□□□□ -2.32
PGK1P00558 MIR5197-201ENST00000583721 112 ntBASIC0.55□□□□□ -2.32
PGK1P00558 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
PGK1P00558 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.54□□□□□ -2.32
PGK1P00558 AC010332.2-201ENST00000613083 1904 ntBASIC0.54□□□□□ -2.32
PGK1P00558 Y_RNA.288-201ENST00000364854 92 ntBASIC0.54□□□□□ -2.32
PGK1P00558 MIR563-201ENST00000385080 79 ntBASIC0.54□□□□□ -2.32
PGK1P00558 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.54□□□□□ -2.32
PGK1P00558 MIR548H3-201ENST00000408771 118 ntBASIC0.54□□□□□ -2.32
PGK1P00558 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.54□□□□□ -2.32
PGK1P00558 RNU6-327P-201ENST00000516270 127 ntBASIC0.54□□□□□ -2.32
PGK1P00558 RNU4-54P-201ENST00000516428 129 ntBASIC0.54□□□□□ -2.32
PGK1P00558 Y_RNA.680-201ENST00000516441 93 ntBASIC0.54□□□□□ -2.32
PGK1P00558 Y_RNA.681-201ENST00000516445 113 ntBASIC0.54□□□□□ -2.32
PGK1P00558 AC011195.1-201ENST00000578177 177 ntBASIC0.54□□□□□ -2.32
PGK1P00558 MIR3129-201ENST00000581095 76 ntBASIC0.54□□□□□ -2.32
PGK1P00558 AL365205.2-201ENST00000594586 68 ntBASIC0.54□□□□□ -2.32
PGK1P00558 AC020891.4-201ENST00000605745 93 ntBASIC0.54□□□□□ -2.32
PGK1P00558 AL136317.1-201ENST00000612653 226 ntBASIC0.54□□□□□ -2.32
PGK1P00558 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
PGK1P00558 MIR1-1-201ENST00000362147 71 ntBASIC0.53□□□□□ -2.32
PGK1P00558 SNORA1.1-201ENST00000364671 133 ntBASIC0.53□□□□□ -2.32
PGK1P00558 RNY4P28-201ENST00000365281 93 ntBASIC0.53□□□□□ -2.32
PGK1P00558 MIR573-201ENST00000384964 99 ntBASIC0.53□□□□□ -2.32
PGK1P00558 RNU1-119P-201ENST00000391122 165 ntBASIC0.53□□□□□ -2.32
PGK1P00558 SNORD58.1-201ENST00000391313 66 ntBASIC0.53□□□□□ -2.32
PGK1P00558 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
PGK1P00558 RNU7-45P-201ENST00000459460 63 ntBASIC0.53□□□□□ -2.32
PGK1P00558 MIR2909-201ENST00000617113 69 ntBASIC0.53□□□□□ -2.32
PGK1P00558 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.52□□□□□ -2.33
PGK1P00558 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
PGK1P00558 Y_RNA.7-201ENST00000362352 102 ntBASIC0.52□□□□□ -2.33
PGK1P00558 Y_RNA.68-201ENST00000362881 102 ntBASIC0.52□□□□□ -2.33
PGK1P00558 RNU6-103P-201ENST00000363686 107 ntBASIC0.52□□□□□ -2.33
PGK1P00558 SNORD27-201ENST00000363981 72 ntBASIC0.52□□□□□ -2.33
PGK1P00558 RNU6-978P-201ENST00000364371 103 ntBASIC0.52□□□□□ -2.33
PGK1P00558 RNU6-934P-201ENST00000365154 107 ntBASIC0.52□□□□□ -2.33
PGK1P00558 RNU6-728P-201ENST00000365375 104 ntBASIC0.52□□□□□ -2.33
PGK1P00558 Y_RNA.542-201ENST00000384641 111 ntBASIC0.52□□□□□ -2.33
PGK1P00558 SNORD38B-201ENST00000384690 67 ntBASIC0.52□□□□□ -2.33
PGK1P00558 RNU6-493P-201ENST00000391321 108 ntBASIC0.52□□□□□ -2.33
PGK1P00558 RNU6-1165P-201ENST00000410119 107 ntBASIC0.52□□□□□ -2.33
PGK1P00558 RNA5SP127-201ENST00000411051 133 ntBASIC0.52□□□□□ -2.33
PGK1P00558 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.52□□□□□ -2.33
PGK1P00558 snoU13.2-201ENST00000459201 104 ntBASIC0.52□□□□□ -2.33
PGK1P00558 MIR4308-201ENST00000580634 81 ntBASIC0.52□□□□□ -2.33
PGK1P00558 MIR4804-201ENST00000581683 73 ntBASIC0.52□□□□□ -2.33
PGK1P00558 MIR4676-201ENST00000583078 72 ntBASIC0.52□□□□□ -2.33
PGK1P00558 SNORD38B-202ENST00000625943 69 ntBASIC0.52□□□□□ -2.33
PGK1P00558 Y_RNA.178-201ENST00000363832 102 ntBASIC0.51□□□□□ -2.33
PGK1P00558 Y_RNA.308-201ENST00000365043 101 ntBASIC0.51□□□□□ -2.33
PGK1P00558 RNU6-597P-201ENST00000365620 102 ntBASIC0.51□□□□□ -2.33
PGK1P00558 VTRNA1-3-201ENST00000365645 89 ntBASIC0.51□□□□□ -2.33
PGK1P00558 Y_RNA.477-201ENST00000384352 108 ntBASIC0.51□□□□□ -2.33
PGK1P00558 MIR520F-201ENST00000384824 87 ntBASIC0.51□□□□□ -2.33
PGK1P00558 MIR588-201ENST00000384900 83 ntBASIC0.51□□□□□ -2.33
PGK1P00558 MIR520H-201ENST00000385126 88 ntBASIC0.51□□□□□ -2.33
PGK1P00558 SNORD12C-201ENST00000386307 89 ntBASIC0.51□□□□□ -2.33
PGK1P00558 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.51□□□□□ -2.33
PGK1P00558 AC091932.4-201ENST00000623386 200 ntBASIC0.51□□□□□ -2.33
PGK1P00558 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.5□□□□□ -2.33
PGK1P00558 MIR342-201ENST00000362212 99 ntBASIC0.5□□□□□ -2.33
PGK1P00558 MIR30D-201ENST00000362283 70 ntBASIC0.5□□□□□ -2.33
PGK1P00558 Y_RNA.20-201ENST00000362479 113 ntBASIC0.5□□□□□ -2.33
PGK1P00558 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
PGK1P00558 RNU6-177P-201ENST00000411257 104 ntBASIC0.5□□□□□ -2.33
PGK1P00558 RNU6-977P-201ENST00000516411 103 ntBASIC0.5□□□□□ -2.33
PGK1P00558 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
PGK1P00558 AC018659.1-201ENST00000551083 169 ntBASIC0.5□□□□□ -2.33
PGK1P00558 MIR4744-201ENST00000581563 82 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms