Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 TRMT112P2-201ENST00000512910 132 ntBASIC0.9□□□□□ -2.27
NKX2-2O95096 AC108729.3-201ENST00000513484 108 ntBASIC0.9□□□□□ -2.27
NKX2-2O95096 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.9□□□□□ -2.27
NKX2-2O95096 AL136317.1-201ENST00000612653 226 ntBASIC0.9□□□□□ -2.27
NKX2-2O95096 AL596211.1-201ENST00000569873 2277 ntBASIC0.9□□□□□ -2.27
NKX2-2O95096 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
NKX2-2O95096 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.9□□□□□ -2.27
NKX2-2O95096 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
NKX2-2O95096 RNA5SP432-201ENST00000362480 116 ntBASIC0.89□□□□□ -2.27
NKX2-2O95096 RNU1-133P-201ENST00000364867 167 ntBASIC0.89□□□□□ -2.27
NKX2-2O95096 Y_RNA.354-201ENST00000365448 111 ntBASIC0.89□□□□□ -2.27
NKX2-2O95096 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.89□□□□□ -2.27
NKX2-2O95096 RNU7-45P-201ENST00000459460 63 ntBASIC0.89□□□□□ -2.27
NKX2-2O95096 RNU7-121P-201ENST00000516604 62 ntBASIC0.89□□□□□ -2.27
NKX2-2O95096 RNU7-70P-201ENST00000516941 66 ntBASIC0.89□□□□□ -2.27
NKX2-2O95096 SNORA81.3-201ENST00000517283 198 ntBASIC0.89□□□□□ -2.27
NKX2-2O95096 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.89□□□□□ -2.27
NKX2-2O95096 MIR6740-201ENST00000618268 113 ntBASIC0.89□□□□□ -2.27
NKX2-2O95096 RNU6-682P-201ENST00000363843 106 ntBASIC0.88□□□□□ -2.27
NKX2-2O95096 RNU4-84P-201ENST00000364200 139 ntBASIC0.88□□□□□ -2.27
NKX2-2O95096 RNU6-239P-201ENST00000390990 99 ntBASIC0.88□□□□□ -2.27
NKX2-2O95096 snoU13.2-201ENST00000459201 104 ntBASIC0.88□□□□□ -2.27
NKX2-2O95096 RNU6-369P-201ENST00000362515 102 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 Y_RNA.52-201ENST00000362760 96 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 RNU6-1082P-201ENST00000364574 107 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 Y_RNA.338-201ENST00000365320 114 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 Y_RNA.357-201ENST00000365487 109 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 RNU6-1336P-201ENST00000383886 109 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 SNORA22-201ENST00000383907 134 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 SNORA22C-201ENST00000384614 134 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 MIR588-201ENST00000384900 83 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 MIR563-201ENST00000385080 79 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 SNORD89-201ENST00000390981 114 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 SNORA75.5-201ENST00000391291 81 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 RNU5E-9P-201ENST00000411164 104 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 snoU13.21-201ENST00000459368 105 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 MIR3646-201ENST00000578301 84 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 MIR3152-201ENST00000579801 74 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 AC025627.3-201ENST00000582078 182 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 MIR6841-201ENST00000637129 72 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 MTND5P32-201ENST00000560711 1802 ntBASIC0.87□□□□□ -2.27
NKX2-2O95096 MIR1-1-201ENST00000362147 71 ntBASIC0.86□□□□□ -2.27
NKX2-2O95096 RNU6-934P-201ENST00000365154 107 ntBASIC0.86□□□□□ -2.27
NKX2-2O95096 Y_RNA.441-201ENST00000384123 112 ntBASIC0.86□□□□□ -2.27
NKX2-2O95096 RPS26P5-201ENST00000418544 335 ntBASIC0.86□□□□□ -2.27
NKX2-2O95096 RNU6-861P-201ENST00000516745 106 ntBASIC0.86□□□□□ -2.27
NKX2-2O95096 AC004792.1-201ENST00000614523 137 ntBASIC0.86□□□□□ -2.27
NKX2-2O95096 AC021613.1-201ENST00000623880 111 ntBASIC0.86□□□□□ -2.27
NKX2-2O95096 RNY1P10-201ENST00000363268 113 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 RNU6-818P-201ENST00000364837 108 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 RNU6-1318P-201ENST00000365389 103 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 RNU6-1335P-201ENST00000365426 107 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 SNORA20-201ENST00000384662 132 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 MIR608-201ENST00000384820 100 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 MIR532-201ENST00000385025 91 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 SNORD12C-201ENST00000386307 89 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 RNU6-1165P-201ENST00000410119 107 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 RNU6-1135P-201ENST00000411083 103 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 MIR18B-201ENST00000454574 71 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 AC113410.1-201ENST00000505029 247 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 RNU6-1053P-201ENST00000515930 101 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 Y_RNA.662-201ENST00000516028 97 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 MIR3124-201ENST00000582636 67 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 uc_338.6-201ENST00000613544 171 ntBASIC0.85□□□□□ -2.27
NKX2-2O95096 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
NKX2-2O95096 SNORD83.1-201ENST00000411362 77 ntBASIC0.84□□□□□ -2.27
NKX2-2O95096 RNA5SP236-201ENST00000516169 116 ntBASIC0.84□□□□□ -2.27
NKX2-2O95096 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.84□□□□□ -2.27
NKX2-2O95096 AL353765.1-201ENST00000605514 183 ntBASIC0.84□□□□□ -2.27
NKX2-2O95096 MIR6844-201ENST00000637122 62 ntBASIC0.84□□□□□ -2.27
NKX2-2O95096 MIR100-201ENST00000385259 80 ntBASIC0.83□□□□□ -2.28
NKX2-2O95096 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.83□□□□□ -2.28
NKX2-2O95096 RNU2-64P-201ENST00000411315 191 ntBASIC0.83□□□□□ -2.28
NKX2-2O95096 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
NKX2-2O95096 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.83□□□□□ -2.28
NKX2-2O95096 DNAJC19P2-201ENST00000593340 302 ntBASIC0.83□□□□□ -2.28
NKX2-2O95096 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
NKX2-2O95096 AC010332.2-201ENST00000613083 1904 ntBASIC0.83□□□□□ -2.28
NKX2-2O95096 MIR30D-201ENST00000362283 70 ntBASIC0.82□□□□□ -2.28
NKX2-2O95096 SNORA22.1-201ENST00000362701 134 ntBASIC0.82□□□□□ -2.28
NKX2-2O95096 RNY1P6-201ENST00000384193 109 ntBASIC0.82□□□□□ -2.28
NKX2-2O95096 SNORD105-201ENST00000386910 85 ntBASIC0.82□□□□□ -2.28
NKX2-2O95096 MT-TF-201ENST00000387314 71 ntBASIC0.82□□□□□ -2.28
NKX2-2O95096 RNU6-893P-201ENST00000458841 100 ntBASIC0.82□□□□□ -2.28
NKX2-2O95096 MIR4771-2-201ENST00000577758 74 ntBASIC0.82□□□□□ -2.28
NKX2-2O95096 MIR4771-1-201ENST00000582617 74 ntBASIC0.82□□□□□ -2.28
NKX2-2O95096 MIR6857-201ENST00000613267 93 ntBASIC0.82□□□□□ -2.28
NKX2-2O95096 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
NKX2-2O95096 Y_RNA.497-201ENST00000384447 98 ntBASIC0.81□□□□□ -2.28
NKX2-2O95096 MTND5P15-201ENST00000434246 349 ntBASIC0.81□□□□□ -2.28
NKX2-2O95096 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.81□□□□□ -2.28
NKX2-2O95096 RMST_2.1-201ENST00000617263 136 ntBASIC0.81□□□□□ -2.28
NKX2-2O95096 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
NKX2-2O95096 RNU6-349P-201ENST00000362402 107 ntBASIC0.8□□□□□ -2.28
NKX2-2O95096 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
NKX2-2O95096 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
NKX2-2O95096 RNU6-182P-201ENST00000516970 105 ntBASIC0.8□□□□□ -2.28
NKX2-2O95096 MIR4676-201ENST00000583078 72 ntBASIC0.8□□□□□ -2.28
NKX2-2O95096 FAM71BP1-201ENST00000604431 523 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms