Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 HSPE1P25-201ENST00000455484 251 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.21□□□□□ -2.44
NPHP4O75161 SNORA20.3-201ENST00000516880 132 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 MIR4662B-201ENST00000579498 81 ntBASIC-0.21□□□□□ -2.44
NPHP4O75161 MIR302B-201ENST00000362188 73 ntBASIC-0.22□□□□□ -2.45
NPHP4O75161 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.22□□□□□ -2.45
NPHP4O75161 RNU6-888P-201ENST00000363010 101 ntBASIC-0.22□□□□□ -2.45
NPHP4O75161 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.22□□□□□ -2.45
NPHP4O75161 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.22□□□□□ -2.45
NPHP4O75161 RNA5SP128-201ENST00000365305 116 ntBASIC-0.22□□□□□ -2.45
NPHP4O75161 SNORD24-201ENST00000383884 75 ntBASIC-0.22□□□□□ -2.45
NPHP4O75161 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.22□□□□□ -2.45
NPHP4O75161 RNU6-291P-201ENST00000384720 107 ntBASIC-0.22□□□□□ -2.45
NPHP4O75161 PMCHL1-202ENST00000423102 261 ntBASIC-0.22□□□□□ -2.45
NPHP4O75161 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.22□□□□□ -2.45
NPHP4O75161 RPL39P34-201ENST00000477141 156 ntBASIC-0.22□□□□□ -2.45
NPHP4O75161 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.22□□□□□ -2.45
NPHP4O75161 AC040926.1-201ENST00000530195 238 ntBASIC-0.22□□□□□ -2.45
NPHP4O75161 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.22□□□□□ -2.45
NPHP4O75161 AC244669.1-204ENST00000621564 178 ntBASIC-0.22□□□□□ -2.45
NPHP4O75161 MIR1302-1-201ENST00000637932 143 ntBASIC-0.22□□□□□ -2.45
NPHP4O75161 AC091304.10-201ENST00000641554 121 ntBASIC-0.22□□□□□ -2.45
NPHP4O75161 RNU4-40P-201ENST00000364351 143 ntBASIC-0.23□□□□□ -2.45
NPHP4O75161 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.23□□□□□ -2.45
NPHP4O75161 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.23□□□□□ -2.45
NPHP4O75161 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.23□□□□□ -2.45
NPHP4O75161 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.23□□□□□ -2.45
NPHP4O75161 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.23□□□□□ -2.45
NPHP4O75161 RNU6-535P-201ENST00000384722 107 ntBASIC-0.23□□□□□ -2.45
NPHP4O75161 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.23□□□□□ -2.45
NPHP4O75161 AC096949.1-201ENST00000412047 152 ntBASIC-0.23□□□□□ -2.45
NPHP4O75161 RNU6-507P-201ENST00000516045 100 ntBASIC-0.23□□□□□ -2.45
NPHP4O75161 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.23□□□□□ -2.45
NPHP4O75161 MIR548AX-201ENST00000580117 73 ntBASIC-0.23□□□□□ -2.45
NPHP4O75161 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.23□□□□□ -2.45
NPHP4O75161 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.24□□□□□ -2.45
NPHP4O75161 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.24□□□□□ -2.45
NPHP4O75161 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.24□□□□□ -2.45
NPHP4O75161 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.24□□□□□ -2.45
NPHP4O75161 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.24□□□□□ -2.45
NPHP4O75161 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.24□□□□□ -2.45
NPHP4O75161 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.24□□□□□ -2.45
NPHP4O75161 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.24□□□□□ -2.45
NPHP4O75161 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.24□□□□□ -2.45
NPHP4O75161 SNORA25.16-201ENST00000516741 121 ntBASIC-0.24□□□□□ -2.45
NPHP4O75161 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.24□□□□□ -2.45
NPHP4O75161 AC124312.5-201ENST00000604451 268 ntBASIC-0.24□□□□□ -2.45
NPHP4O75161 AC006157.1-201ENST00000611750 366 ntBASIC-0.24□□□□□ -2.45
NPHP4O75161 AL138825.1-201ENST00000618587 192 ntBASIC-0.24□□□□□ -2.45
NPHP4O75161 RNU6-756P-201ENST00000383997 107 ntBASIC-0.25□□□□□ -2.45
NPHP4O75161 RNU6-662P-201ENST00000384253 104 ntBASIC-0.25□□□□□ -2.45
NPHP4O75161 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.25□□□□□ -2.45
NPHP4O75161 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.25□□□□□ -2.45
NPHP4O75161 AC098614.3-201ENST00000438957 440 ntBASIC-0.25□□□□□ -2.45
NPHP4O75161 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.25□□□□□ -2.45
NPHP4O75161 AC141846.1-201ENST00000568348 142 ntBASIC-0.25□□□□□ -2.45
NPHP4O75161 MIR376A1-201ENST00000616574 68 ntBASIC-0.25□□□□□ -2.45
NPHP4O75161 MIR376A2-201ENST00000636782 80 ntBASIC-0.25□□□□□ -2.45
NPHP4O75161 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
NPHP4O75161 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.26□□□□□ -2.45
NPHP4O75161 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.26□□□□□ -2.45
NPHP4O75161 RNU6-653P-201ENST00000363074 106 ntBASIC-0.26□□□□□ -2.45
NPHP4O75161 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.26□□□□□ -2.45
NPHP4O75161 RNU1-29P-201ENST00000606574 126 ntBASIC-0.26□□□□□ -2.45
NPHP4O75161 RNA5SP245-201ENST00000364239 121 ntBASIC-0.27□□□□□ -2.45
NPHP4O75161 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.27□□□□□ -2.45
NPHP4O75161 RNU1-115P-201ENST00000365329 160 ntBASIC-0.27□□□□□ -2.45
NPHP4O75161 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.27□□□□□ -2.45
NPHP4O75161 SNORA1-201ENST00000384107 130 ntBASIC-0.27□□□□□ -2.45
NPHP4O75161 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.27□□□□□ -2.45
NPHP4O75161 RNU7-152P-201ENST00000458982 64 ntBASIC-0.27□□□□□ -2.45
NPHP4O75161 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.27□□□□□ -2.45
NPHP4O75161 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.27□□□□□ -2.45
NPHP4O75161 MIR4639-201ENST00000584938 69 ntBASIC-0.27□□□□□ -2.45
NPHP4O75161 AL132765.2-201ENST00000610812 351 ntBASIC-0.27□□□□□ -2.45
NPHP4O75161 AC007485.1-201ENST00000616755 206 ntBASIC-0.27□□□□□ -2.45
NPHP4O75161 AC112487.2-201ENST00000637950 304 ntBASIC-0.27□□□□□ -2.45
NPHP4O75161 MIR215-201ENST00000384858 110 ntBASIC-0.28□□□□□ -2.45
NPHP4O75161 MIR224-201ENST00000384889 81 ntBASIC-0.28□□□□□ -2.45
NPHP4O75161 RNU6-765P-201ENST00000516916 99 ntBASIC-0.28□□□□□ -2.45
NPHP4O75161 AC006006.1-201ENST00000603082 144 ntBASIC-0.28□□□□□ -2.45
NPHP4O75161 AL008718.3-201ENST00000610217 321 ntBASIC-0.28□□□□□ -2.45
NPHP4O75161 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.29□□□□□ -2.46
NPHP4O75161 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.29□□□□□ -2.46
NPHP4O75161 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.29□□□□□ -2.46
NPHP4O75161 AC138393.2-201ENST00000414742 246 ntBASIC-0.29□□□□□ -2.46
NPHP4O75161 MTND4LP11-201ENST00000422184 280 ntBASIC-0.29□□□□□ -2.46
NPHP4O75161 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.29□□□□□ -2.46
NPHP4O75161 RNU6-135P-201ENST00000516769 101 ntBASIC-0.29□□□□□ -2.46
NPHP4O75161 AP003733.2-201ENST00000529409 171 ntBASIC-0.29□□□□□ -2.46
NPHP4O75161 AC138869.1-201ENST00000568623 124 ntBASIC-0.29□□□□□ -2.46
NPHP4O75161 snoU18.1-201ENST00000629629 71 ntBASIC-0.29□□□□□ -2.46
NPHP4O75161 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.29□□□□□ -2.46
NPHP4O75161 AL596211.1-201ENST00000569873 2277 ntBASIC-0.29□□□□□ -2.46
NPHP4O75161 RNU4-90P-201ENST00000362773 141 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 SNORA63.5-201ENST00000363548 123 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 SNORD115-46-201ENST00000390982 71 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 SNORD19B-201ENST00000459623 84 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 RNU6-782P-201ENST00000516852 104 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms