Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AL034345.1-201ENST00000407768 123 ntBASIC1.25□□□□□ -2.21
CACNA1FO60840 MIR1267-201ENST00000408723 78 ntBASIC1.25□□□□□ -2.21
CACNA1FO60840 RPS29P24-201ENST00000486345 171 ntBASIC1.25□□□□□ -2.21
CACNA1FO60840 MIR4295-201ENST00000585286 85 ntBASIC1.25□□□□□ -2.21
CACNA1FO60840 MIR302B-201ENST00000362188 73 ntBASIC1.25□□□□□ -2.21
CACNA1FO60840 Y_RNA.120-201ENST00000363304 110 ntBASIC1.25□□□□□ -2.21
CACNA1FO60840 RNU6-44P-201ENST00000384045 107 ntBASIC1.25□□□□□ -2.21
CACNA1FO60840 MIR660-201ENST00000385235 97 ntBASIC1.25□□□□□ -2.21
CACNA1FO60840 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.25□□□□□ -2.21
CACNA1FO60840 SNX2P2-201ENST00000424553 323 ntBASIC1.25□□□□□ -2.21
CACNA1FO60840 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.25□□□□□ -2.21
CACNA1FO60840 RNU6-313P-201ENST00000516317 112 ntBASIC1.25□□□□□ -2.21
CACNA1FO60840 SNORD111.1-201ENST00000516421 86 ntBASIC1.25□□□□□ -2.21
CACNA1FO60840 AL442644.1-201ENST00000454390 3105 ntBASIC1.24□□□□□ -2.21
CACNA1FO60840 AL596211.1-201ENST00000569873 2277 ntBASIC1.24□□□□□ -2.21
CACNA1FO60840 RNU6-1056P-201ENST00000383996 107 ntBASIC1.24□□□□□ -2.21
CACNA1FO60840 RNY1P6-201ENST00000384193 109 ntBASIC1.24□□□□□ -2.21
CACNA1FO60840 Y_RNA.547-201ENST00000384654 119 ntBASIC1.24□□□□□ -2.21
CACNA1FO60840 AC087499.4-201ENST00000448505 178 ntBASIC1.24□□□□□ -2.21
CACNA1FO60840 RNU6-240P-201ENST00000516098 97 ntBASIC1.24□□□□□ -2.21
CACNA1FO60840 MIR548AR-201ENST00000582191 57 ntBASIC1.24□□□□□ -2.21
CACNA1FO60840 AC091932.4-201ENST00000623386 200 ntBASIC1.24□□□□□ -2.21
CACNA1FO60840 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.23□□□□□ -2.21
CACNA1FO60840 RNA5SP325-201ENST00000363756 130 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 Y_RNA.299-201ENST00000364973 94 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 SNORD77.3-201ENST00000391113 65 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 RNU6-938P-201ENST00000411285 103 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 MTATP6P29-201ENST00000415057 132 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 AL591704.2-201ENST00000421658 181 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 AL035398.1-201ENST00000430869 322 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 RNA5SP57-201ENST00000459463 123 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 RNU7-80P-201ENST00000459562 61 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 AL078603.1-201ENST00000603824 313 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 MIR6788-201ENST00000618842 66 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 AC106754.2-201ENST00000623006 233 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 SNORD3E-202ENST00000627253 216 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.23□□□□□ -2.21
CACNA1FO60840 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
CACNA1FO60840 Y_RNA.36-201ENST00000362602 112 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 U8.5-201ENST00000364528 136 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 SNORA24-201ENST00000384096 131 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 RNU6-602P-201ENST00000411155 105 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 RNU6-659P-201ENST00000516454 104 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 SNORA31.10-201ENST00000516482 106 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 RNY4P20-201ENST00000516678 93 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 AC004812.1-201ENST00000540773 146 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 MIR4764-201ENST00000580680 88 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 AC025166.1-201ENST00000612411 163 ntBASIC1.23□□□□□ -2.21
CACNA1FO60840 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CACNA1FO60840 MIR373-201ENST00000362273 69 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-34-201ENST00000362441 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-12-201ENST00000362583 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-29-201ENST00000362834 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-9-201ENST00000362912 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-21-201ENST00000362963 81 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-14-201ENST00000363090 81 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 Y_RNA.114-201ENST00000363265 113 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-13-201ENST00000363358 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-41-201ENST00000363608 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-11-201ENST00000363616 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-5-201ENST00000363633 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-39-201ENST00000363694 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-4-201ENST00000363810 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-16-201ENST00000363887 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-6-201ENST00000363942 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-42-201ENST00000364273 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-15-201ENST00000364809 81 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-1-201ENST00000364961 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-26-201ENST00000365067 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-10-201ENST00000365073 81 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 Y_RNA.353-201ENST00000365440 108 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-43-201ENST00000365503 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-36-201ENST00000365629 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 Y_RNA.537-201ENST00000384626 109 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.22□□□□□ -2.21
CACNA1FO60840 RNU6-781P-201ENST00000516377 101 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 RNU6-1149P-201ENST00000516810 97 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SCARNA15-202ENST00000516881 127 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 SNORD115-40-201ENST00000606510 82 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.22□□□□□ -2.21
CACNA1FO60840 Y_RNA.35-201ENST00000362601 101 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 Y_RNA.241-201ENST00000364470 117 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 SNORD58C-201ENST00000365223 64 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 RNA5SP481-201ENST00000516814 122 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 SNORA63.5-201ENST00000363548 123 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 RNU4-16P-201ENST00000364737 141 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 RNU6-296P-201ENST00000384608 107 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 MIR518F-201ENST00000384973 87 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 MIR548A3-201ENST00000385297 97 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CACNA1FO60840 SNORA48.1-201ENST00000390879 135 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 RNU7-67P-201ENST00000459003 62 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 Y_RNA.651-201ENST00000459380 103 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 AC113410.1-201ENST00000505029 247 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 RNU6-958P-201ENST00000516995 106 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 Y_RNA.757-201ENST00000578934 114 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 MIR3152-201ENST00000579801 74 ntBASIC1.21□□□□□ -2.22
CACNA1FO60840 MIR4791-201ENST00000607666 84 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms