Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RMST_2.1-201ENST00000617263 136 ntBASIC0.68□□□□□ -2.3
SNX3O60493 Y_RNA.200-201ENST00000364018 102 ntBASIC0.67□□□□□ -2.3
SNX3O60493 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SNX3O60493 Y_RNA.454-201ENST00000384224 113 ntBASIC0.67□□□□□ -2.3
SNX3O60493 RNU1-119P-201ENST00000391122 165 ntBASIC0.67□□□□□ -2.3
SNX3O60493 RNU6-321P-201ENST00000410912 106 ntBASIC0.67□□□□□ -2.3
SNX3O60493 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
SNX3O60493 AC004817.2-201ENST00000561794 651 ntBASIC0.67□□□□□ -2.3
SNX3O60493 MIR3973-201ENST00000579824 107 ntBASIC0.67□□□□□ -2.3
SNX3O60493 MIR4804-201ENST00000581683 73 ntBASIC0.67□□□□□ -2.3
SNX3O60493 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
SNX3O60493 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.67□□□□□ -2.3
SNX3O60493 MIR411-201ENST00000362239 96 ntBASIC0.66□□□□□ -2.3
SNX3O60493 Y_RNA.75-201ENST00000362927 97 ntBASIC0.66□□□□□ -2.3
SNX3O60493 Y_RNA.83-201ENST00000363005 113 ntBASIC0.66□□□□□ -2.3
SNX3O60493 RNU6-47P-201ENST00000383866 107 ntBASIC0.66□□□□□ -2.3
SNX3O60493 MIR520F-201ENST00000384824 87 ntBASIC0.66□□□□□ -2.3
SNX3O60493 MIR520H-201ENST00000385126 88 ntBASIC0.66□□□□□ -2.3
SNX3O60493 RNA5SP127-201ENST00000411051 133 ntBASIC0.66□□□□□ -2.3
SNX3O60493 MIR18B-201ENST00000454574 71 ntBASIC0.66□□□□□ -2.3
SNX3O60493 AC108729.3-201ENST00000513484 108 ntBASIC0.66□□□□□ -2.3
SNX3O60493 RNU6-113P-201ENST00000516653 101 ntBASIC0.66□□□□□ -2.3
SNX3O60493 MIR4676-201ENST00000583078 72 ntBASIC0.66□□□□□ -2.3
SNX3O60493 HSBP1P2-201ENST00000299671 229 ntBASIC0.65□□□□□ -2.31
SNX3O60493 RNU6-110P-201ENST00000384508 104 ntBASIC0.65□□□□□ -2.31
SNX3O60493 MIR563-201ENST00000385080 79 ntBASIC0.65□□□□□ -2.31
SNX3O60493 MIR624-201ENST00000385217 97 ntBASIC0.65□□□□□ -2.31
SNX3O60493 RNU6-1319P-201ENST00000390855 104 ntBASIC0.65□□□□□ -2.31
SNX3O60493 RNU6-747P-201ENST00000390928 104 ntBASIC0.65□□□□□ -2.31
SNX3O60493 RNU6-241P-201ENST00000391148 104 ntBASIC0.65□□□□□ -2.31
SNX3O60493 RNA5SP261-201ENST00000410536 106 ntBASIC0.65□□□□□ -2.31
SNX3O60493 RNU6-177P-201ENST00000411257 104 ntBASIC0.65□□□□□ -2.31
SNX3O60493 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.65□□□□□ -2.31
SNX3O60493 SCARNA15-202ENST00000516881 127 ntBASIC0.65□□□□□ -2.31
SNX3O60493 RNU7-70P-201ENST00000516941 66 ntBASIC0.65□□□□□ -2.31
SNX3O60493 MRPS18CP4-201ENST00000535821 231 ntBASIC0.65□□□□□ -2.31
SNX3O60493 AC009779.6-201ENST00000603972 165 ntBASIC0.65□□□□□ -2.31
SNX3O60493 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.31
SNX3O60493 Y_RNA.354-201ENST00000365448 111 ntBASIC0.64□□□□□ -2.31
SNX3O60493 RNU6-597P-201ENST00000365620 102 ntBASIC0.64□□□□□ -2.31
SNX3O60493 RNU6-1336P-201ENST00000383886 109 ntBASIC0.64□□□□□ -2.31
SNX3O60493 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.64□□□□□ -2.31
SNX3O60493 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.64□□□□□ -2.31
SNX3O60493 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
SNX3O60493 RNU6-1149P-201ENST00000516810 97 ntBASIC0.64□□□□□ -2.31
SNX3O60493 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.64□□□□□ -2.31
SNX3O60493 AC130289.1-201ENST00000577321 73 ntBASIC0.64□□□□□ -2.31
SNX3O60493 MIR30D-201ENST00000362283 70 ntBASIC0.63□□□□□ -2.31
SNX3O60493 RNY1P10-201ENST00000363268 113 ntBASIC0.63□□□□□ -2.31
SNX3O60493 RNU6-1020P-201ENST00000363684 107 ntBASIC0.63□□□□□ -2.31
SNX3O60493 SNORD114-27-201ENST00000363766 70 ntBASIC0.63□□□□□ -2.31
SNX3O60493 RNU1-133P-201ENST00000364867 167 ntBASIC0.63□□□□□ -2.31
SNX3O60493 Y_RNA.430-201ENST00000384081 110 ntBASIC0.63□□□□□ -2.31
SNX3O60493 Y_RNA.435-201ENST00000384095 112 ntBASIC0.63□□□□□ -2.31
SNX3O60493 RNA5SP222-201ENST00000411039 105 ntBASIC0.63□□□□□ -2.31
SNX3O60493 RNU7-56P-201ENST00000458744 62 ntBASIC0.63□□□□□ -2.31
SNX3O60493 MIR3152-201ENST00000579801 74 ntBASIC0.63□□□□□ -2.31
SNX3O60493 Z83818.1-201ENST00000603584 150 ntBASIC0.63□□□□□ -2.31
SNX3O60493 MIR6767-201ENST00000637302 66 ntBASIC0.63□□□□□ -2.31
SNX3O60493 MIR373-201ENST00000362273 69 ntBASIC0.62□□□□□ -2.31
SNX3O60493 MIR337-201ENST00000362281 93 ntBASIC0.62□□□□□ -2.31
SNX3O60493 SNORA25.7-201ENST00000364375 127 ntBASIC0.62□□□□□ -2.31
SNX3O60493 Y_RNA.489-201ENST00000384410 101 ntBASIC0.62□□□□□ -2.31
SNX3O60493 Y_RNA.521-201ENST00000384560 114 ntBASIC0.62□□□□□ -2.31
SNX3O60493 MIR573-201ENST00000384964 99 ntBASIC0.62□□□□□ -2.31
SNX3O60493 RNU7-185P-201ENST00000459215 60 ntBASIC0.62□□□□□ -2.31
SNX3O60493 MIR4431-201ENST00000579990 94 ntBASIC0.62□□□□□ -2.31
SNX3O60493 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.62□□□□□ -2.31
SNX3O60493 AC021613.1-201ENST00000623880 111 ntBASIC0.62□□□□□ -2.31
SNX3O60493 MTND5P32-201ENST00000560711 1802 ntBASIC0.61□□□□□ -2.31
SNX3O60493 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.61□□□□□ -2.31
SNX3O60493 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
SNX3O60493 SNORA20-201ENST00000384662 132 ntBASIC0.61□□□□□ -2.31
SNX3O60493 RNU6-1237P-201ENST00000384777 107 ntBASIC0.61□□□□□ -2.31
SNX3O60493 MIR125B2-201ENST00000385128 89 ntBASIC0.61□□□□□ -2.31
SNX3O60493 MIR938-201ENST00000401216 83 ntBASIC0.61□□□□□ -2.31
SNX3O60493 AC004941.2-201ENST00000427009 228 ntBASIC0.61□□□□□ -2.31
SNX3O60493 RNU6-1053P-201ENST00000515930 101 ntBASIC0.61□□□□□ -2.31
SNX3O60493 RNU6-1219P-201ENST00000516143 112 ntBASIC0.61□□□□□ -2.31
SNX3O60493 AC022559.1-201ENST00000520905 205 ntBASIC0.61□□□□□ -2.31
SNX3O60493 MIR6841-201ENST00000637129 72 ntBASIC0.61□□□□□ -2.31
SNX3O60493 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
SNX3O60493 Y_RNA.274-201ENST00000364714 101 ntBASIC0.6□□□□□ -2.31
SNX3O60493 Y_RNA.338-201ENST00000365320 114 ntBASIC0.6□□□□□ -2.31
SNX3O60493 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
SNX3O60493 MT-TF-201ENST00000387314 71 ntBASIC0.6□□□□□ -2.31
SNX3O60493 MIR1257-201ENST00000408490 117 ntBASIC0.6□□□□□ -2.31
SNX3O60493 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
SNX3O60493 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.6□□□□□ -2.31
SNX3O60493 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
SNX3O60493 SNORA22.1-201ENST00000362701 134 ntBASIC0.59□□□□□ -2.31
SNX3O60493 RNU4-16P-201ENST00000364737 141 ntBASIC0.59□□□□□ -2.31
SNX3O60493 RNY1P8-201ENST00000383970 114 ntBASIC0.59□□□□□ -2.31
SNX3O60493 SNORA36.2-201ENST00000384004 127 ntBASIC0.59□□□□□ -2.31
SNX3O60493 RNU6-768P-201ENST00000384683 107 ntBASIC0.59□□□□□ -2.31
SNX3O60493 RNA5SP102-201ENST00000516865 106 ntBASIC0.59□□□□□ -2.31
SNX3O60493 RNU6-1271P-201ENST00000517049 105 ntBASIC0.59□□□□□ -2.31
SNX3O60493 AC008608.1-201ENST00000603910 127 ntBASIC0.59□□□□□ -2.31
SNX3O60493 AL662814.1-201ENST00000617364 121 ntBASIC0.59□□□□□ -2.31
SNX3O60493 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 424.2 ms