Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 RNU7-164P-201ENST00000459221 62 ntBASIC1.64□□□□□ -2.15
KDM1AO60341 RNU6-313P-201ENST00000516317 112 ntBASIC1.64□□□□□ -2.15
KDM1AO60341 RNU6-781P-201ENST00000516377 101 ntBASIC1.64□□□□□ -2.15
KDM1AO60341 AP003716.2-201ENST00000528260 108 ntBASIC1.64□□□□□ -2.15
KDM1AO60341 MIR103A2-201ENST00000362154 78 ntBASIC1.63□□□□□ -2.15
KDM1AO60341 Y_RNA.298-201ENST00000364960 107 ntBASIC1.63□□□□□ -2.15
KDM1AO60341 Y_RNA.525-201ENST00000384570 113 ntBASIC1.63□□□□□ -2.15
KDM1AO60341 RNU6-1168P-201ENST00000390831 104 ntBASIC1.63□□□□□ -2.15
KDM1AO60341 MIR1302-7-201ENST00000408841 72 ntBASIC1.63□□□□□ -2.15
KDM1AO60341 AL022718.1-201ENST00000412004 84 ntBASIC1.63□□□□□ -2.15
KDM1AO60341 POLR2J4-204ENST00000418424 324 ntBASIC1.63□□□□□ -2.15
KDM1AO60341 AC245047.7-201ENST00000440265 293 ntBASIC1.63□□□□□ -2.15
KDM1AO60341 RNU7-123P-201ENST00000515911 60 ntBASIC1.63□□□□□ -2.15
KDM1AO60341 RNY4P20-201ENST00000516678 93 ntBASIC1.63□□□□□ -2.15
KDM1AO60341 AP000942.3-201ENST00000603702 160 ntBASIC1.63□□□□□ -2.15
KDM1AO60341 RNA5SP264-201ENST00000363115 107 ntBASIC1.62□□□□□ -2.15
KDM1AO60341 Y_RNA.261-201ENST00000364631 102 ntBASIC1.62□□□□□ -2.15
KDM1AO60341 MIRLET7F2-201ENST00000385277 83 ntBASIC1.62□□□□□ -2.15
KDM1AO60341 RNU6-1154P-201ENST00000391001 104 ntBASIC1.62□□□□□ -2.15
KDM1AO60341 RNA5SP136-201ENST00000410906 107 ntBASIC1.62□□□□□ -2.15
KDM1AO60341 RNU6-1054P-201ENST00000411293 104 ntBASIC1.62□□□□□ -2.15
KDM1AO60341 AC090844.1-201ENST00000422019 156 ntBASIC1.62□□□□□ -2.15
KDM1AO60341 RNU2-35P-201ENST00000516446 142 ntBASIC1.62□□□□□ -2.15
KDM1AO60341 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.62□□□□□ -2.15
KDM1AO60341 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.62□□□□□ -2.15
KDM1AO60341 RNU6-1081P-201ENST00000384537 107 ntBASIC1.61□□□□□ -2.15
KDM1AO60341 SNORA67.5-201ENST00000391036 107 ntBASIC1.61□□□□□ -2.15
KDM1AO60341 MIR1263-201ENST00000408324 86 ntBASIC1.61□□□□□ -2.15
KDM1AO60341 MIR1185-1-201ENST00000408598 86 ntBASIC1.61□□□□□ -2.15
KDM1AO60341 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.61□□□□□ -2.15
KDM1AO60341 MIR3914-2-201ENST00000637339 95 ntBASIC1.61□□□□□ -2.15
KDM1AO60341 AL161722.3-201ENST00000605789 2983 ntBASIC1.6□□□□□ -2.15
KDM1AO60341 SNORD48-201ENST00000364953 64 ntBASIC1.6□□□□□ -2.15
KDM1AO60341 RNA5SP190-201ENST00000365222 118 ntBASIC1.6□□□□□ -2.15
KDM1AO60341 Y_RNA.354-201ENST00000365448 111 ntBASIC1.6□□□□□ -2.15
KDM1AO60341 SNORA22C-201ENST00000384614 134 ntBASIC1.6□□□□□ -2.15
KDM1AO60341 RNU6-602P-201ENST00000411155 105 ntBASIC1.6□□□□□ -2.15
KDM1AO60341 AC048334.1-201ENST00000477975 159 ntBASIC1.6□□□□□ -2.15
KDM1AO60341 SNORA31.2-201ENST00000516019 134 ntBASIC1.6□□□□□ -2.15
KDM1AO60341 MIR2115-201ENST00000516657 100 ntBASIC1.6□□□□□ -2.15
KDM1AO60341 RNU11-2P-201ENST00000516898 142 ntBASIC1.6□□□□□ -2.15
KDM1AO60341 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.6□□□□□ -2.15
KDM1AO60341 SNORD53B-201ENST00000577887 78 ntBASIC1.6□□□□□ -2.15
KDM1AO60341 MIR4524B-201ENST00000581569 115 ntBASIC1.6□□□□□ -2.15
KDM1AO60341 AC025166.1-201ENST00000612411 163 ntBASIC1.6□□□□□ -2.15
KDM1AO60341 MIR8065-201ENST00000620577 100 ntBASIC1.6□□□□□ -2.15
KDM1AO60341 RNA5SP205-201ENST00000364653 136 ntBASIC1.59□□□□□ -2.15
KDM1AO60341 RNU6-396P-201ENST00000365369 105 ntBASIC1.59□□□□□ -2.15
KDM1AO60341 SNORD38B-201ENST00000384690 67 ntBASIC1.59□□□□□ -2.15
KDM1AO60341 MIR548I2-201ENST00000408348 149 ntBASIC1.59□□□□□ -2.15
KDM1AO60341 AC015712.3-201ENST00000559380 164 ntBASIC1.59□□□□□ -2.15
KDM1AO60341 PRELID3BP2-201ENST00000605362 201 ntBASIC1.59□□□□□ -2.15
KDM1AO60341 SNORD38B-202ENST00000625943 69 ntBASIC1.59□□□□□ -2.15
KDM1AO60341 U6.95-201ENST00000636931 70 ntBASIC1.59□□□□□ -2.15
KDM1AO60341 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
KDM1AO60341 Y_RNA.630-201ENST00000411370 108 ntBASIC1.58□□□□□ -2.16
KDM1AO60341 RNU7-113P-201ENST00000459273 62 ntBASIC1.58□□□□□ -2.16
KDM1AO60341 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.58□□□□□ -2.16
KDM1AO60341 COX6CP6-201ENST00000490840 228 ntBASIC1.58□□□□□ -2.16
KDM1AO60341 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.58□□□□□ -2.16
KDM1AO60341 BX248123.2-201ENST00000606318 124 ntBASIC1.58□□□□□ -2.16
KDM1AO60341 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.58□□□□□ -2.16
KDM1AO60341 MIR8081-201ENST00000611533 95 ntBASIC1.58□□□□□ -2.16
KDM1AO60341 Y_RNA.171-201ENST00000363760 102 ntBASIC1.57□□□□□ -2.16
KDM1AO60341 Y_RNA.346-201ENST00000365385 112 ntBASIC1.57□□□□□ -2.16
KDM1AO60341 Y_RNA.528-201ENST00000384575 108 ntBASIC1.57□□□□□ -2.16
KDM1AO60341 Y_RNA.563-201ENST00000384707 108 ntBASIC1.57□□□□□ -2.16
KDM1AO60341 MIR517C-201ENST00000385103 95 ntBASIC1.57□□□□□ -2.16
KDM1AO60341 AC113410.1-201ENST00000505029 247 ntBASIC1.57□□□□□ -2.16
KDM1AO60341 RNU6-1258P-201ENST00000516911 111 ntBASIC1.57□□□□□ -2.16
KDM1AO60341 AC004812.1-201ENST00000540773 146 ntBASIC1.57□□□□□ -2.16
KDM1AO60341 AL353997.5-201ENST00000618886 171 ntBASIC1.57□□□□□ -2.16
KDM1AO60341 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.57□□□□□ -2.16
KDM1AO60341 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KDM1AO60341 Y_RNA.213-201ENST00000364178 111 ntBASIC1.56□□□□□ -2.16
KDM1AO60341 Y_RNA.291-201ENST00000364886 113 ntBASIC1.56□□□□□ -2.16
KDM1AO60341 Y_RNA.531-201ENST00000384589 121 ntBASIC1.56□□□□□ -2.16
KDM1AO60341 MT-TN-201ENST00000387400 73 ntBASIC1.56□□□□□ -2.16
KDM1AO60341 RNU6-482P-201ENST00000391068 107 ntBASIC1.56□□□□□ -2.16
KDM1AO60341 AL512326.2-201ENST00000426359 151 ntBASIC1.56□□□□□ -2.16
KDM1AO60341 MIR548AI-201ENST00000579940 88 ntBASIC1.56□□□□□ -2.16
KDM1AO60341 MIR4264-201ENST00000583520 66 ntBASIC1.56□□□□□ -2.16
KDM1AO60341 MIR6516-201ENST00000630554 81 ntBASIC1.56□□□□□ -2.16
KDM1AO60341 MTND5P18-201ENST00000445624 1801 ntBASIC1.55□□□□□ -2.16
KDM1AO60341 SNORD115-2-201ENST00000362842 82 ntBASIC1.55□□□□□ -2.16
KDM1AO60341 SNORD115-20-201ENST00000365099 82 ntBASIC1.55□□□□□ -2.16
KDM1AO60341 RNU6-613P-201ENST00000410412 108 ntBASIC1.55□□□□□ -2.16
KDM1AO60341 SNORD33.1-201ENST00000516213 88 ntBASIC1.55□□□□□ -2.16
KDM1AO60341 AC022523.2-201ENST00000561045 150 ntBASIC1.55□□□□□ -2.16
KDM1AO60341 AL359881.1-201ENST00000602916 267 ntBASIC1.55□□□□□ -2.16
KDM1AO60341 AP000753.3-201ENST00000604083 169 ntBASIC1.55□□□□□ -2.16
KDM1AO60341 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KDM1AO60341 MIR377-201ENST00000362145 69 ntBASIC1.54□□□□□ -2.16
KDM1AO60341 Y_RNA.198-201ENST00000364013 98 ntBASIC1.54□□□□□ -2.16
KDM1AO60341 RPS23P4-201ENST00000487908 423 ntBASIC1.54□□□□□ -2.16
KDM1AO60341 Y_RNA.470-201ENST00000384307 117 ntBASIC1.53□□□□□ -2.16
KDM1AO60341 SNORD12C-201ENST00000386307 89 ntBASIC1.53□□□□□ -2.16
KDM1AO60341 SNORA67.6-201ENST00000391093 99 ntBASIC1.53□□□□□ -2.16
KDM1AO60341 RPS29P23-201ENST00000458635 123 ntBASIC1.53□□□□□ -2.16
KDM1AO60341 SNORD13-201ENST00000459299 104 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms