Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 Y_RNA.65-201ENST00000362846 100 ntBASIC0.5□□□□□ -2.33
RIPK2O43353 RNY1-201ENST00000364228 113 ntBASIC0.5□□□□□ -2.33
RIPK2O43353 RNU6-978P-201ENST00000364371 103 ntBASIC0.5□□□□□ -2.33
RIPK2O43353 RNU6-945P-201ENST00000383947 107 ntBASIC0.5□□□□□ -2.33
RIPK2O43353 MIR1302-3-201ENST00000408128 138 ntBASIC0.5□□□□□ -2.33
RIPK2O43353 RNU6-602P-201ENST00000411155 105 ntBASIC0.5□□□□□ -2.33
RIPK2O43353 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.5□□□□□ -2.33
RIPK2O43353 MIR4744-201ENST00000581563 82 ntBASIC0.5□□□□□ -2.33
RIPK2O43353 MIR3128-201ENST00000581957 66 ntBASIC0.5□□□□□ -2.33
RIPK2O43353 AL365205.2-201ENST00000594586 68 ntBASIC0.5□□□□□ -2.33
RIPK2O43353 RNU2-4P-201ENST00000606190 192 ntBASIC0.5□□□□□ -2.33
RIPK2O43353 AC022709.1-201ENST00000615967 87 ntBASIC0.5□□□□□ -2.33
RIPK2O43353 MIR1-1-201ENST00000362147 71 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 SNORA1.1-201ENST00000364671 133 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 RNU6-923P-201ENST00000364753 107 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 Y_RNA.542-201ENST00000384641 111 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 SNORD38B-201ENST00000384690 67 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 SNORD105-201ENST00000386910 85 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
RIPK2O43353 RNU6-578P-201ENST00000390980 103 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 RNU1-119P-201ENST00000391122 165 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 SNORA26.6-201ENST00000391256 115 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 Y_RNA.626-201ENST00000411288 95 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 AC244098.3-201ENST00000424803 96 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 RNU7-45P-201ENST00000459460 63 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
RIPK2O43353 MIR4503-201ENST00000582187 83 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 AC062037.2-201ENST00000610137 73 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 SNORD38B-202ENST00000625943 69 ntBASIC0.49□□□□□ -2.33
RIPK2O43353 MIR342-201ENST00000362212 99 ntBASIC0.48□□□□□ -2.33
RIPK2O43353 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
RIPK2O43353 RNU6-934P-201ENST00000365154 107 ntBASIC0.48□□□□□ -2.33
RIPK2O43353 RNU6-574P-201ENST00000384265 107 ntBASIC0.48□□□□□ -2.33
RIPK2O43353 MIR613-201ENST00000385248 95 ntBASIC0.48□□□□□ -2.33
RIPK2O43353 SNORA79-201ENST00000408376 140 ntBASIC0.48□□□□□ -2.33
RIPK2O43353 AL121914.1-201ENST00000450188 156 ntBASIC0.48□□□□□ -2.33
RIPK2O43353 MIR4771-2-201ENST00000577758 74 ntBASIC0.48□□□□□ -2.33
RIPK2O43353 MIR4771-1-201ENST00000582617 74 ntBASIC0.48□□□□□ -2.33
RIPK2O43353 AC020891.4-201ENST00000605745 93 ntBASIC0.48□□□□□ -2.33
RIPK2O43353 U4.1-201ENST00000620349 87 ntBASIC0.48□□□□□ -2.33
RIPK2O43353 AC010332.2-201ENST00000613083 1904 ntBASIC0.48□□□□□ -2.33
RIPK2O43353 Y_RNA.193-201ENST00000363979 102 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 Y_RNA.307-201ENST00000365022 117 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 Y_RNA.351-201ENST00000365436 96 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 RNU6-1292P-201ENST00000383856 107 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 Y_RNA.478-201ENST00000384358 107 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 Y_RNA.571-201ENST00000384753 98 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 RNU6-1237P-201ENST00000384777 107 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 MIR598-201ENST00000384868 97 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 MIR588-201ENST00000384900 83 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 MIR563-201ENST00000385080 79 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 SNORD12C-201ENST00000386307 89 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 snoU13.2-201ENST00000459201 104 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 RNU6-1023P-201ENST00000516137 106 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 RNU6-111P-201ENST00000517179 105 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.47□□□□□ -2.33
RIPK2O43353 AC011195.1-201ENST00000578177 177 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 MIR4714-201ENST00000580728 77 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 AL353621.2-201ENST00000605340 133 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 MIR7111-201ENST00000619751 72 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 MIR6717-201ENST00000622747 73 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 AC091932.4-201ENST00000623386 200 ntBASIC0.47□□□□□ -2.33
RIPK2O43353 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
RIPK2O43353 Y_RNA.121-201ENST00000363309 113 ntBASIC0.46□□□□□ -2.34
RIPK2O43353 RNU6-702P-201ENST00000364982 107 ntBASIC0.46□□□□□ -2.34
RIPK2O43353 RNU6-643P-201ENST00000384018 107 ntBASIC0.46□□□□□ -2.34
RIPK2O43353 Y_RNA.447-201ENST00000384184 113 ntBASIC0.46□□□□□ -2.34
RIPK2O43353 Y_RNA.452-201ENST00000384202 108 ntBASIC0.46□□□□□ -2.34
RIPK2O43353 RNU6-196P-201ENST00000384315 107 ntBASIC0.46□□□□□ -2.34
RIPK2O43353 MIR489-201ENST00000384923 84 ntBASIC0.46□□□□□ -2.34
RIPK2O43353 RNU6-1165P-201ENST00000410119 107 ntBASIC0.46□□□□□ -2.34
RIPK2O43353 Y_RNA.797-201ENST00000515977 94 ntBASIC0.46□□□□□ -2.34
RIPK2O43353 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.46□□□□□ -2.34
RIPK2O43353 MIR378D2-201ENST00000580636 98 ntBASIC0.46□□□□□ -2.34
RIPK2O43353 MIR4804-201ENST00000581683 73 ntBASIC0.46□□□□□ -2.34
RIPK2O43353 MIR4676-201ENST00000583078 72 ntBASIC0.46□□□□□ -2.34
RIPK2O43353 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.46□□□□□ -2.34
RIPK2O43353 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.46□□□□□ -2.34
RIPK2O43353 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.45□□□□□ -2.34
RIPK2O43353 RNA5SP347-201ENST00000362445 119 ntBASIC0.45□□□□□ -2.34
RIPK2O43353 Y_RNA.182-201ENST00000363880 111 ntBASIC0.45□□□□□ -2.34
RIPK2O43353 RNU1-133P-201ENST00000364867 167 ntBASIC0.45□□□□□ -2.34
RIPK2O43353 RNU6-275P-201ENST00000364910 107 ntBASIC0.45□□□□□ -2.34
RIPK2O43353 Y_RNA.354-201ENST00000365448 111 ntBASIC0.45□□□□□ -2.34
RIPK2O43353 RNU6-597P-201ENST00000365620 102 ntBASIC0.45□□□□□ -2.34
RIPK2O43353 MIR520F-201ENST00000384824 87 ntBASIC0.45□□□□□ -2.34
RIPK2O43353 MIR573-201ENST00000384964 99 ntBASIC0.45□□□□□ -2.34
RIPK2O43353 MIR520H-201ENST00000385126 88 ntBASIC0.45□□□□□ -2.34
RIPK2O43353 Y_RNA.618-201ENST00000410949 107 ntBASIC0.45□□□□□ -2.34
RIPK2O43353 SEPT7P4-201ENST00000437076 306 ntBASIC0.45□□□□□ -2.34
RIPK2O43353 RNU4-71P-201ENST00000516258 113 ntBASIC0.45□□□□□ -2.34
RIPK2O43353 RNU6-977P-201ENST00000516411 103 ntBASIC0.45□□□□□ -2.34
RIPK2O43353 SNORD116-25-201ENST00000516517 92 ntBASIC0.45□□□□□ -2.34
RIPK2O43353 SCARNA15-202ENST00000516881 127 ntBASIC0.45□□□□□ -2.34
RIPK2O43353 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.45□□□□□ -2.34
RIPK2O43353 AL596211.1-201ENST00000569873 2277 ntBASIC0.44□□□□□ -2.34
RIPK2O43353 MIR30D-201ENST00000362283 70 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms