Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 MIR342-201ENST00000362212 99 ntBASIC1.34□□□□□ -2.19
MSI1O43347 SNORA25.3-201ENST00000363205 127 ntBASIC1.34□□□□□ -2.19
MSI1O43347 Y_RNA.568-201ENST00000384742 113 ntBASIC1.34□□□□□ -2.19
MSI1O43347 SNORA40.6-201ENST00000391153 128 ntBASIC1.34□□□□□ -2.19
MSI1O43347 MIR548M-201ENST00000408260 86 ntBASIC1.34□□□□□ -2.19
MSI1O43347 MIR1302-7-201ENST00000408841 72 ntBASIC1.34□□□□□ -2.19
MSI1O43347 RNU7-73P-201ENST00000458743 63 ntBASIC1.34□□□□□ -2.19
MSI1O43347 RNU2-11P-201ENST00000459191 187 ntBASIC1.34□□□□□ -2.19
MSI1O43347 AC048334.1-201ENST00000477975 159 ntBASIC1.34□□□□□ -2.19
MSI1O43347 MIR3660-201ENST00000584845 100 ntBASIC1.34□□□□□ -2.19
MSI1O43347 AP001485.1-201ENST00000604799 199 ntBASIC1.34□□□□□ -2.19
MSI1O43347 AC091895.1-201ENST00000624494 256 ntBASIC1.34□□□□□ -2.19
MSI1O43347 RNU6-915P-201ENST00000364943 103 ntBASIC1.33□□□□□ -2.2
MSI1O43347 AL603908.1-201ENST00000406098 201 ntBASIC1.33□□□□□ -2.2
MSI1O43347 RNU6-1190P-201ENST00000410811 104 ntBASIC1.33□□□□□ -2.2
MSI1O43347 Y_RNA.651-201ENST00000459380 103 ntBASIC1.33□□□□□ -2.2
MSI1O43347 RNU7-80P-201ENST00000459562 61 ntBASIC1.33□□□□□ -2.2
MSI1O43347 RNU7-53P-201ENST00000516705 60 ntBASIC1.33□□□□□ -2.2
MSI1O43347 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.33□□□□□ -2.2
MSI1O43347 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.33□□□□□ -2.2
MSI1O43347 AL596211.1-201ENST00000569873 2277 ntBASIC1.33□□□□□ -2.2
MSI1O43347 RNU6-309P-201ENST00000364573 106 ntBASIC1.32□□□□□ -2.2
MSI1O43347 RNU1-133P-201ENST00000364867 167 ntBASIC1.32□□□□□ -2.2
MSI1O43347 Y_RNA.354-201ENST00000365448 111 ntBASIC1.32□□□□□ -2.2
MSI1O43347 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
MSI1O43347 AL603914.1-201ENST00000401964 204 ntBASIC1.32□□□□□ -2.2
MSI1O43347 RNU6-1054P-201ENST00000411293 104 ntBASIC1.32□□□□□ -2.2
MSI1O43347 snoU13.16-201ENST00000459350 104 ntBASIC1.32□□□□□ -2.2
MSI1O43347 RNU7-45P-201ENST00000459460 63 ntBASIC1.32□□□□□ -2.2
MSI1O43347 AL133373.1-201ENST00000497098 94 ntBASIC1.32□□□□□ -2.2
MSI1O43347 HSPE1P19-201ENST00000603327 295 ntBASIC1.32□□□□□ -2.2
MSI1O43347 AL020996.3-201ENST00000606617 222 ntBASIC1.32□□□□□ -2.2
MSI1O43347 AP001340.1-201ENST00000624405 217 ntBASIC1.32□□□□□ -2.2
MSI1O43347 AC010332.2-201ENST00000613083 1904 ntBASIC1.32□□□□□ -2.2
MSI1O43347 Y_RNA.343-201ENST00000365354 112 ntBASIC1.31□□□□□ -2.2
MSI1O43347 Y_RNA.454-201ENST00000384224 113 ntBASIC1.31□□□□□ -2.2
MSI1O43347 MIR1185-1-201ENST00000408598 86 ntBASIC1.31□□□□□ -2.2
MSI1O43347 RNU6-257P-201ENST00000410238 98 ntBASIC1.31□□□□□ -2.2
MSI1O43347 AC090844.1-201ENST00000422019 156 ntBASIC1.31□□□□□ -2.2
MSI1O43347 HMGN1P33-201ENST00000432945 451 ntBASIC1.31□□□□□ -2.2
MSI1O43347 AC245047.7-201ENST00000440265 293 ntBASIC1.31□□□□□ -2.2
MSI1O43347 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.31□□□□□ -2.2
MSI1O43347 Y_RNA.690-201ENST00000516603 95 ntBASIC1.31□□□□□ -2.2
MSI1O43347 RNU6-1223P-201ENST00000517124 104 ntBASIC1.31□□□□□ -2.2
MSI1O43347 AP001328.1-201ENST00000528550 176 ntBASIC1.31□□□□□ -2.2
MSI1O43347 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.31□□□□□ -2.2
MSI1O43347 PRELID3BP2-201ENST00000605362 201 ntBASIC1.31□□□□□ -2.2
MSI1O43347 MIR6078-201ENST00000611069 100 ntBASIC1.31□□□□□ -2.2
MSI1O43347 AL161722.3-201ENST00000605789 2983 ntBASIC1.31□□□□□ -2.2
MSI1O43347 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.31□□□□□ -2.2
MSI1O43347 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
MSI1O43347 RNU6-349P-201ENST00000362402 107 ntBASIC1.3□□□□□ -2.2
MSI1O43347 RNA5SP264-201ENST00000363115 107 ntBASIC1.3□□□□□ -2.2
MSI1O43347 Y_RNA.205-201ENST00000364128 113 ntBASIC1.3□□□□□ -2.2
MSI1O43347 Y_RNA.363-201ENST00000365529 113 ntBASIC1.3□□□□□ -2.2
MSI1O43347 SNORA26.6-201ENST00000391256 115 ntBASIC1.3□□□□□ -2.2
MSI1O43347 MTND4LP9-201ENST00000427694 174 ntBASIC1.3□□□□□ -2.2
MSI1O43347 AL392103.1-201ENST00000447000 198 ntBASIC1.3□□□□□ -2.2
MSI1O43347 SNORA31.2-201ENST00000516019 134 ntBASIC1.3□□□□□ -2.2
MSI1O43347 RNU7-70P-201ENST00000516941 66 ntBASIC1.3□□□□□ -2.2
MSI1O43347 AL022345.2-201ENST00000606307 135 ntBASIC1.3□□□□□ -2.2
MSI1O43347 MIR8055-201ENST00000610739 97 ntBASIC1.3□□□□□ -2.2
MSI1O43347 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.3□□□□□ -2.2
MSI1O43347 MIR302B-201ENST00000362188 73 ntBASIC1.29□□□□□ -2.2
MSI1O43347 MTATP6P21-201ENST00000440681 189 ntBASIC1.29□□□□□ -2.2
MSI1O43347 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.29□□□□□ -2.2
MSI1O43347 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.29□□□□□ -2.2
MSI1O43347 MIR103A2-201ENST00000362154 78 ntBASIC1.28□□□□□ -2.2
MSI1O43347 Y_RNA.178-201ENST00000363832 102 ntBASIC1.28□□□□□ -2.2
MSI1O43347 RNU6-704P-201ENST00000364162 103 ntBASIC1.28□□□□□ -2.2
MSI1O43347 RNU4-16P-201ENST00000364737 141 ntBASIC1.28□□□□□ -2.2
MSI1O43347 Y_RNA.294-201ENST00000364916 102 ntBASIC1.28□□□□□ -2.2
MSI1O43347 RNU6-53P-201ENST00000365367 106 ntBASIC1.28□□□□□ -2.2
MSI1O43347 SNORD50.2-201ENST00000365465 70 ntBASIC1.28□□□□□ -2.2
MSI1O43347 SNORD18B-201ENST00000365659 72 ntBASIC1.28□□□□□ -2.2
MSI1O43347 RNY1P6-201ENST00000384193 109 ntBASIC1.28□□□□□ -2.2
MSI1O43347 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.28□□□□□ -2.2
MSI1O43347 MIR8065-201ENST00000620577 100 ntBASIC1.28□□□□□ -2.2
MSI1O43347 Z97988.1-201ENST00000637697 135 ntBASIC1.28□□□□□ -2.2
MSI1O43347 Y_RNA.586-201ENST00000391146 98 ntBASIC1.27□□□□□ -2.21
MSI1O43347 MIR3121-201ENST00000579680 77 ntBASIC1.27□□□□□ -2.21
MSI1O43347 U7.2-201ENST00000607576 63 ntBASIC1.27□□□□□ -2.21
MSI1O43347 MIR6717-201ENST00000622747 73 ntBASIC1.27□□□□□ -2.21
MSI1O43347 AC021613.1-201ENST00000623880 111 ntBASIC1.27□□□□□ -2.21
MSI1O43347 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.27□□□□□ -2.21
MSI1O43347 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
MSI1O43347 Y_RNA.280-201ENST00000364765 112 ntBASIC1.26□□□□□ -2.21
MSI1O43347 SNORA40-201ENST00000388090 126 ntBASIC1.26□□□□□ -2.21
MSI1O43347 RNU6-1319P-201ENST00000390855 104 ntBASIC1.26□□□□□ -2.21
MSI1O43347 RNU6-747P-201ENST00000390928 104 ntBASIC1.26□□□□□ -2.21
MSI1O43347 SNORA75.2-201ENST00000391138 150 ntBASIC1.26□□□□□ -2.21
MSI1O43347 RNU6-241P-201ENST00000391148 104 ntBASIC1.26□□□□□ -2.21
MSI1O43347 SNORA75.3-201ENST00000391231 150 ntBASIC1.26□□□□□ -2.21
MSI1O43347 RNU6-177P-201ENST00000411257 104 ntBASIC1.26□□□□□ -2.21
MSI1O43347 POLR2J4-204ENST00000418424 324 ntBASIC1.26□□□□□ -2.21
MSI1O43347 MIR151B-201ENST00000584249 96 ntBASIC1.26□□□□□ -2.21
MSI1O43347 AC108081.1-201ENST00000604358 221 ntBASIC1.26□□□□□ -2.21
MSI1O43347 MIR6841-201ENST00000637129 72 ntBASIC1.26□□□□□ -2.21
MSI1O43347 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
MSI1O43347 RNA5SP327-201ENST00000362494 101 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms