Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 MIR1273G-201ENST00000577677 100 ntBASIC0.91□□□□□ -2.26
CDX4O14627 MIR3646-201ENST00000578301 84 ntBASIC0.91□□□□□ -2.26
CDX4O14627 MIR3192-201ENST00000584920 77 ntBASIC0.91□□□□□ -2.26
CDX4O14627 AL096861.1-201ENST00000610899 123 ntBASIC0.91□□□□□ -2.26
CDX4O14627 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.91□□□□□ -2.26
CDX4O14627 MTND5P32-201ENST00000560711 1802 ntBASIC0.91□□□□□ -2.26
CDX4O14627 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
CDX4O14627 Y_RNA.215-201ENST00000364204 112 ntBASIC0.9□□□□□ -2.27
CDX4O14627 SNORA1.2-201ENST00000365189 134 ntBASIC0.9□□□□□ -2.27
CDX4O14627 Y_RNA.400-201ENST00000383963 111 ntBASIC0.9□□□□□ -2.27
CDX4O14627 Y_RNA.440-201ENST00000384120 114 ntBASIC0.9□□□□□ -2.27
CDX4O14627 SNORA70.7-201ENST00000384159 133 ntBASIC0.9□□□□□ -2.27
CDX4O14627 SNORA27-201ENST00000384323 126 ntBASIC0.9□□□□□ -2.27
CDX4O14627 Y_RNA.497-201ENST00000384447 98 ntBASIC0.9□□□□□ -2.27
CDX4O14627 SNORA20-201ENST00000384662 132 ntBASIC0.9□□□□□ -2.27
CDX4O14627 SNORD12-201ENST00000391002 90 ntBASIC0.9□□□□□ -2.27
CDX4O14627 SNORA40.5-201ENST00000391061 128 ntBASIC0.9□□□□□ -2.27
CDX4O14627 SNORA25.12-201ENST00000516202 82 ntBASIC0.9□□□□□ -2.27
CDX4O14627 RNU7-43P-201ENST00000516554 64 ntBASIC0.9□□□□□ -2.27
CDX4O14627 MIR5197-201ENST00000583721 112 ntBASIC0.9□□□□□ -2.27
CDX4O14627 AL022345.2-201ENST00000606307 135 ntBASIC0.9□□□□□ -2.27
CDX4O14627 MIR4791-201ENST00000607666 84 ntBASIC0.9□□□□□ -2.27
CDX4O14627 MTND1P7-201ENST00000632801 297 ntBASIC0.9□□□□□ -2.27
CDX4O14627 SNORD115-34-201ENST00000362441 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-12-201ENST00000362583 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 Y_RNA.52-201ENST00000362760 96 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-29-201ENST00000362834 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-9-201ENST00000362912 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-21-201ENST00000362963 81 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-14-201ENST00000363090 81 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-13-201ENST00000363358 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-41-201ENST00000363608 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-11-201ENST00000363616 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-5-201ENST00000363633 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 RNA5SP457-201ENST00000363657 124 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-39-201ENST00000363694 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-4-201ENST00000363810 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-16-201ENST00000363887 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-6-201ENST00000363942 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-42-201ENST00000364273 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 Y_RNA.251-201ENST00000364551 99 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-15-201ENST00000364809 81 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-1-201ENST00000364961 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-26-201ENST00000365067 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-10-201ENST00000365073 81 ntBASIC0.89□□□□□ -2.27
CDX4O14627 Y_RNA.351-201ENST00000365436 96 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-43-201ENST00000365503 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-36-201ENST00000365629 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 RNU6-125P-201ENST00000384505 107 ntBASIC0.89□□□□□ -2.27
CDX4O14627 RNU6-460P-201ENST00000391158 108 ntBASIC0.89□□□□□ -2.27
CDX4O14627 MIR1285-1-201ENST00000408593 84 ntBASIC0.89□□□□□ -2.27
CDX4O14627 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.89□□□□□ -2.27
CDX4O14627 RPS29P28-201ENST00000446439 141 ntBASIC0.89□□□□□ -2.27
CDX4O14627 RNU7-197P-201ENST00000458836 62 ntBASIC0.89□□□□□ -2.27
CDX4O14627 snoU13.25-201ENST00000458945 104 ntBASIC0.89□□□□□ -2.27
CDX4O14627 RNU7-67P-201ENST00000459003 62 ntBASIC0.89□□□□□ -2.27
CDX4O14627 AC107297.1-201ENST00000459991 176 ntBASIC0.89□□□□□ -2.27
CDX4O14627 RNU2-13P-201ENST00000515909 113 ntBASIC0.89□□□□□ -2.27
CDX4O14627 RNU6-1149P-201ENST00000516810 97 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SCARNA15-202ENST00000516881 127 ntBASIC0.89□□□□□ -2.27
CDX4O14627 RNU6-958P-201ENST00000516995 106 ntBASIC0.89□□□□□ -2.27
CDX4O14627 MIR3133-201ENST00000583157 78 ntBASIC0.89□□□□□ -2.27
CDX4O14627 AC131055.1-201ENST00000584626 316 ntBASIC0.89□□□□□ -2.27
CDX4O14627 SNORD115-40-201ENST00000606510 82 ntBASIC0.89□□□□□ -2.27
CDX4O14627 AC243994.1-201ENST00000618627 109 ntBASIC0.89□□□□□ -2.27
CDX4O14627 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.88□□□□□ -2.27
CDX4O14627 SNORA25.3-201ENST00000363205 127 ntBASIC0.88□□□□□ -2.27
CDX4O14627 RNU6-508P-201ENST00000363231 103 ntBASIC0.88□□□□□ -2.27
CDX4O14627 MIR569-201ENST00000385228 96 ntBASIC0.88□□□□□ -2.27
CDX4O14627 RNU6-910P-201ENST00000390844 107 ntBASIC0.88□□□□□ -2.27
CDX4O14627 Y_RNA.584-201ENST00000391090 114 ntBASIC0.88□□□□□ -2.27
CDX4O14627 MIR513C-201ENST00000401352 84 ntBASIC0.88□□□□□ -2.27
CDX4O14627 SUMO1P3-201ENST00000439961 304 ntBASIC0.88□□□□□ -2.27
CDX4O14627 RPS29P24-201ENST00000486345 171 ntBASIC0.88□□□□□ -2.27
CDX4O14627 RNU2-60P-201ENST00000517290 128 ntBASIC0.88□□□□□ -2.27
CDX4O14627 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.88□□□□□ -2.27
CDX4O14627 MIR548X2-201ENST00000579776 100 ntBASIC0.88□□□□□ -2.27
CDX4O14627 AL590095.2-201ENST00000604136 117 ntBASIC0.88□□□□□ -2.27
CDX4O14627 MIR6513-201ENST00000621188 64 ntBASIC0.88□□□□□ -2.27
CDX4O14627 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
CDX4O14627 RNU6-187P-201ENST00000384139 106 ntBASIC0.87□□□□□ -2.27
CDX4O14627 Y_RNA.488-201ENST00000384403 102 ntBASIC0.87□□□□□ -2.27
CDX4O14627 SNORA51.10-201ENST00000384418 136 ntBASIC0.87□□□□□ -2.27
CDX4O14627 SNORA80D-201ENST00000384488 135 ntBASIC0.87□□□□□ -2.27
CDX4O14627 Y_RNA.537-201ENST00000384626 109 ntBASIC0.87□□□□□ -2.27
CDX4O14627 RNU6-1067P-201ENST00000384752 107 ntBASIC0.87□□□□□ -2.27
CDX4O14627 RNU2-11P-201ENST00000459191 187 ntBASIC0.87□□□□□ -2.27
CDX4O14627 AC048334.1-201ENST00000477975 159 ntBASIC0.87□□□□□ -2.27
CDX4O14627 RNU6-426P-201ENST00000516464 97 ntBASIC0.87□□□□□ -2.27
CDX4O14627 Y_RNA.686-201ENST00000516548 134 ntBASIC0.87□□□□□ -2.27
CDX4O14627 AC027335.2-201ENST00000624030 375 ntBASIC0.87□□□□□ -2.27
CDX4O14627 MIR4251-201ENST00000635819 61 ntBASIC0.87□□□□□ -2.27
CDX4O14627 AL596211.1-201ENST00000569873 2277 ntBASIC0.87□□□□□ -2.27
CDX4O14627 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.86□□□□□ -2.27
CDX4O14627 RNA5SP48-201ENST00000363969 126 ntBASIC0.86□□□□□ -2.27
CDX4O14627 RNY1P5-201ENST00000383890 115 ntBASIC0.86□□□□□ -2.27
CDX4O14627 RNU6-913P-201ENST00000390913 95 ntBASIC0.86□□□□□ -2.27
CDX4O14627 MIR548M-201ENST00000408260 86 ntBASIC0.86□□□□□ -2.27
CDX4O14627 RNU7-45P-201ENST00000459460 63 ntBASIC0.86□□□□□ -2.27
CDX4O14627 RNU6-998P-201ENST00000515894 101 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms