Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 RNU6-480P-201ENST00000384332 107 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 AC006210.1-201ENST00000424882 111 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-0.66□□□□□ -2.52
SDCBPO00560 AC114755.3-201ENST00000481111 251 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 RNU6-699P-201ENST00000517081 110 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 MIR4724-201ENST00000579485 89 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.66□□□□□ -2.52
SDCBPO00560 MIR4263-201ENST00000584745 83 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 AL356055.1-201ENST00000602528 446 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 U6.109-201ENST00000636749 87 ntBASIC-0.66□□□□□ -2.52
SDCBPO00560 MIR626-201ENST00000385032 94 ntBASIC-0.67□□□□□ -2.52
SDCBPO00560 AC069439.1-201ENST00000494739 167 ntBASIC-0.67□□□□□ -2.52
SDCBPO00560 SNORA25.13-201ENST00000516395 103 ntBASIC-0.67□□□□□ -2.52
SDCBPO00560 MIR5692C2-201ENST00000577959 77 ntBASIC-0.67□□□□□ -2.52
SDCBPO00560 MIR4432-201ENST00000581823 84 ntBASIC-0.67□□□□□ -2.52
SDCBPO00560 MIR548AZ-201ENST00000616567 95 ntBASIC-0.67□□□□□ -2.52
SDCBPO00560 AC105081.1-201ENST00000617727 106 ntBASIC-0.67□□□□□ -2.52
SDCBPO00560 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.67□□□□□ -2.52
SDCBPO00560 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.67□□□□□ -2.52
SDCBPO00560 MIR101-2-201ENST00000362195 79 ntBASIC-0.68□□□□□ -2.52
SDCBPO00560 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.68□□□□□ -2.52
SDCBPO00560 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.68□□□□□ -2.52
SDCBPO00560 RNU6-484P-201ENST00000384016 107 ntBASIC-0.68□□□□□ -2.52
SDCBPO00560 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.68□□□□□ -2.52
SDCBPO00560 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.68□□□□□ -2.52
SDCBPO00560 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.68□□□□□ -2.52
SDCBPO00560 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.68□□□□□ -2.52
SDCBPO00560 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.68□□□□□ -2.52
SDCBPO00560 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.68□□□□□ -2.52
SDCBPO00560 C8orf59P2-201ENST00000603441 271 ntBASIC-0.68□□□□□ -2.52
SDCBPO00560 AL121655.1-201ENST00000605811 308 ntBASIC-0.68□□□□□ -2.52
SDCBPO00560 uc_338.36-201ENST00000622331 158 ntBASIC-0.68□□□□□ -2.52
SDCBPO00560 RNU6-490P-201ENST00000362985 107 ntBASIC-0.69□□□□□ -2.52
SDCBPO00560 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.69□□□□□ -2.52
SDCBPO00560 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.69□□□□□ -2.52
SDCBPO00560 RNU6-102P-201ENST00000384485 104 ntBASIC-0.69□□□□□ -2.52
SDCBPO00560 SNORA32.3-201ENST00000384772 121 ntBASIC-0.69□□□□□ -2.52
SDCBPO00560 RNU6-130P-201ENST00000411112 103 ntBASIC-0.69□□□□□ -2.52
SDCBPO00560 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.69□□□□□ -2.52
SDCBPO00560 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.69□□□□□ -2.52
SDCBPO00560 AC099799.1-201ENST00000439809 192 ntBASIC-0.69□□□□□ -2.52
SDCBPO00560 RNU7-79P-201ENST00000516082 62 ntBASIC-0.69□□□□□ -2.52
SDCBPO00560 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.69□□□□□ -2.52
SDCBPO00560 PART1_1.1-201ENST00000611761 217 ntBASIC-0.69□□□□□ -2.52
SDCBPO00560 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-0.69□□□□□ -2.52
SDCBPO00560 AC021613.1-201ENST00000623880 111 ntBASIC-0.69□□□□□ -2.52
SDCBPO00560 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.7□□□□□ -2.52
SDCBPO00560 RNY1P2-201ENST00000364820 117 ntBASIC-0.7□□□□□ -2.52
SDCBPO00560 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.7□□□□□ -2.52
SDCBPO00560 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.7□□□□□ -2.52
SDCBPO00560 PMCHL1-202ENST00000423102 261 ntBASIC-0.7□□□□□ -2.52
SDCBPO00560 SEPT14P8-201ENST00000508026 178 ntBASIC-0.7□□□□□ -2.52
SDCBPO00560 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.7□□□□□ -2.52
SDCBPO00560 MIR5197-201ENST00000583721 112 ntBASIC-0.7□□□□□ -2.52
SDCBPO00560 MIR5690-201ENST00000583739 73 ntBASIC-0.7□□□□□ -2.52
SDCBPO00560 SNORD113-5-201ENST00000607261 78 ntBASIC-0.7□□□□□ -2.52
SDCBPO00560 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.71□□□□□ -2.52
SDCBPO00560 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.71□□□□□ -2.52
SDCBPO00560 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.71□□□□□ -2.52
SDCBPO00560 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.71□□□□□ -2.52
SDCBPO00560 SNORA20-201ENST00000384662 132 ntBASIC-0.71□□□□□ -2.52
SDCBPO00560 SNORA8.3-201ENST00000384679 139 ntBASIC-0.71□□□□□ -2.52
SDCBPO00560 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
SDCBPO00560 MIR548F1-201ENST00000408667 84 ntBASIC-0.71□□□□□ -2.52
SDCBPO00560 RNU7-80P-201ENST00000459562 61 ntBASIC-0.71□□□□□ -2.52
SDCBPO00560 RNU6-126P-201ENST00000516685 103 ntBASIC-0.71□□□□□ -2.52
SDCBPO00560 AC024909.2-201ENST00000553035 286 ntBASIC-0.71□□□□□ -2.52
SDCBPO00560 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.71□□□□□ -2.52
SDCBPO00560 AC007485.1-201ENST00000616755 206 ntBASIC-0.71□□□□□ -2.52
SDCBPO00560 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.72□□□□□ -2.52
SDCBPO00560 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.72□□□□□ -2.52
SDCBPO00560 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.72□□□□□ -2.52
SDCBPO00560 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.72□□□□□ -2.52
SDCBPO00560 MIR526A2-201ENST00000390198 65 ntBASIC-0.72□□□□□ -2.52
SDCBPO00560 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.72□□□□□ -2.52
SDCBPO00560 MTND4LP11-201ENST00000422184 280 ntBASIC-0.72□□□□□ -2.52
SDCBPO00560 HSPE1P25-201ENST00000455484 251 ntBASIC-0.72□□□□□ -2.52
SDCBPO00560 RNU6-507P-201ENST00000516045 100 ntBASIC-0.72□□□□□ -2.52
SDCBPO00560 RNU7-35P-201ENST00000517174 62 ntBASIC-0.72□□□□□ -2.52
SDCBPO00560 MIR3129-201ENST00000581095 76 ntBASIC-0.72□□□□□ -2.52
SDCBPO00560 AP001180.6-201ENST00000584918 159 ntBASIC-0.72□□□□□ -2.52
SDCBPO00560 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.72□□□□□ -2.52
SDCBPO00560 AC002553.4-201ENST00000616896 331 ntBASIC-0.72□□□□□ -2.52
SDCBPO00560 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.73□□□□□ -2.53
SDCBPO00560 SNORA25.7-201ENST00000364375 127 ntBASIC-0.73□□□□□ -2.53
SDCBPO00560 RNU4-16P-201ENST00000364737 141 ntBASIC-0.73□□□□□ -2.53
SDCBPO00560 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.73□□□□□ -2.53
SDCBPO00560 Y_RNA.516-201ENST00000384541 124 ntBASIC-0.73□□□□□ -2.53
SDCBPO00560 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
SDCBPO00560 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.73□□□□□ -2.53
SDCBPO00560 RNU6-718P-201ENST00000516166 105 ntBASIC-0.73□□□□□ -2.53
SDCBPO00560 RNU7-188P-201ENST00000517063 64 ntBASIC-0.73□□□□□ -2.53
SDCBPO00560 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.73□□□□□ -2.53
SDCBPO00560 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms