Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SRRM4A7MD48 Y_RNA.4-201ENST00000362333 112 ntBASIC0.93□□□□□ -2.26
SRRM4A7MD48 RNA5SP264-201ENST00000363115 107 ntBASIC0.93□□□□□ -2.26
SRRM4A7MD48 RNU6-309P-201ENST00000364573 106 ntBASIC0.93□□□□□ -2.26
SRRM4A7MD48 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.93□□□□□ -2.26
SRRM4A7MD48 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.93□□□□□ -2.26
SRRM4A7MD48 RNU5E-3P-201ENST00000515913 68 ntBASIC0.93□□□□□ -2.26
SRRM4A7MD48 MIR4661-201ENST00000582720 75 ntBASIC0.93□□□□□ -2.26
SRRM4A7MD48 U7.2-201ENST00000607576 63 ntBASIC0.93□□□□□ -2.26
SRRM4A7MD48 AC011603.4-201ENST00000611325 277 ntBASIC0.93□□□□□ -2.26
SRRM4A7MD48 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.93□□□□□ -2.26
SRRM4A7MD48 AC132825.6-201ENST00000638861 357 ntBASIC0.93□□□□□ -2.26
SRRM4A7MD48 AL157777.2-201ENST00000258070 137 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 MIR342-201ENST00000362212 99 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 SNORD114-24-201ENST00000365029 72 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 Y_RNA.351-201ENST00000365436 96 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 SNORD18B-201ENST00000365659 72 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 SNORA19-201ENST00000384737 128 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 RNU6-321P-201ENST00000410912 106 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 MRPL35P3-201ENST00000421557 364 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 MTATP6P21-201ENST00000440681 189 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 Y_RNA.651-201ENST00000459380 103 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 RNU7-21P-201ENST00000459430 62 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 RPS29P24-201ENST00000486345 171 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 RNU6-998P-201ENST00000515894 101 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 RNU6-971P-201ENST00000516920 106 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 RNU7-70P-201ENST00000516941 66 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 RNU6-789P-201ENST00000517105 102 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.92□□□□□ -2.26
SRRM4A7MD48 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.92□□□□□ -2.26
SRRM4A7MD48 MIR4791-201ENST00000607666 84 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 TUG1_4.1-201ENST00000619464 181 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 AC091932.4-201ENST00000623386 200 ntBASIC0.92□□□□□ -2.26
SRRM4A7MD48 AL596211.1-201ENST00000569873 2277 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
SRRM4A7MD48 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
SRRM4A7MD48 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
SRRM4A7MD48 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
SRRM4A7MD48 MIR103A2-201ENST00000362154 78 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 MIR337-201ENST00000362281 93 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 Y_RNA.218-201ENST00000364218 104 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 RNU1-133P-201ENST00000364867 167 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 RNU6-81P-201ENST00000365608 104 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 AL603914.1-201ENST00000401964 204 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 AC002429.1-201ENST00000437672 148 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 RNU6-1211P-201ENST00000459179 105 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 RNU7-96P-201ENST00000459535 64 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 AC107297.1-201ENST00000459991 176 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 UBL5P1-201ENST00000507979 193 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 RNU2-13P-201ENST00000515909 113 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 RNU7-41P-201ENST00000515917 61 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 Y_RNA.692-201ENST00000516627 105 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 MIR3121-201ENST00000579680 77 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 AC008133.2-201ENST00000624540 351 ntBASIC0.91□□□□□ -2.26
SRRM4A7MD48 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
SRRM4A7MD48 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.9□□□□□ -2.27
SRRM4A7MD48 RNU6-392P-201ENST00000364926 101 ntBASIC0.9□□□□□ -2.27
SRRM4A7MD48 SNORA24-201ENST00000384096 131 ntBASIC0.9□□□□□ -2.27
SRRM4A7MD48 RNU6-959P-201ENST00000384671 107 ntBASIC0.9□□□□□ -2.27
SRRM4A7MD48 MIR1285-1-201ENST00000408593 84 ntBASIC0.9□□□□□ -2.27
SRRM4A7MD48 AL035398.1-201ENST00000430869 322 ntBASIC0.9□□□□□ -2.27
SRRM4A7MD48 RNU7-67P-201ENST00000459003 62 ntBASIC0.9□□□□□ -2.27
SRRM4A7MD48 RNU2-11P-201ENST00000459191 187 ntBASIC0.9□□□□□ -2.27
SRRM4A7MD48 RNU7-80P-201ENST00000459562 61 ntBASIC0.9□□□□□ -2.27
SRRM4A7MD48 RNU6-958P-201ENST00000516995 106 ntBASIC0.9□□□□□ -2.27
SRRM4A7MD48 Y_RNA.757-201ENST00000578934 114 ntBASIC0.9□□□□□ -2.27
SRRM4A7MD48 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.9□□□□□ -2.27
SRRM4A7MD48 AL157834.3-201ENST00000615543 103 ntBASIC0.9□□□□□ -2.27
SRRM4A7MD48 AC243994.1-201ENST00000618627 109 ntBASIC0.9□□□□□ -2.27
SRRM4A7MD48 U2.22-201ENST00000636441 106 ntBASIC0.9□□□□□ -2.27
SRRM4A7MD48 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SRRM4A7MD48 Y_RNA.114-201ENST00000363265 113 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 Y_RNA.164-201ENST00000363709 102 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 Y_RNA.280-201ENST00000364765 112 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 SNORD113-1-201ENST00000365321 69 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 MIR539-201ENST00000365690 78 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 Y_RNA.454-201ENST00000384224 113 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 SNORA51.10-201ENST00000384418 136 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 Y_RNA.537-201ENST00000384626 109 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 FABP5P4-201ENST00000437203 171 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 RPS29P28-201ENST00000446439 141 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 RNU6-240P-201ENST00000516098 97 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 RNU6-1234P-201ENST00000516877 103 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 MIR3192-201ENST00000584920 77 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 MIR4781-201ENST00000585250 76 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 AC108081.1-201ENST00000604358 221 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 SEPT14P17-201ENST00000617978 177 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 MIR4251-201ENST00000635819 61 ntBASIC0.89□□□□□ -2.27
SRRM4A7MD48 MIR302B-201ENST00000362188 73 ntBASIC0.88□□□□□ -2.27
SRRM4A7MD48 RNU6-349P-201ENST00000362402 107 ntBASIC0.88□□□□□ -2.27
SRRM4A7MD48 RNU6-235P-201ENST00000362644 107 ntBASIC0.88□□□□□ -2.27
SRRM4A7MD48 RNU4-16P-201ENST00000364737 141 ntBASIC0.88□□□□□ -2.27
SRRM4A7MD48 RNY1P6-201ENST00000384193 109 ntBASIC0.88□□□□□ -2.27
SRRM4A7MD48 RNU6-913P-201ENST00000390913 95 ntBASIC0.88□□□□□ -2.27
SRRM4A7MD48 AL606753.1-201ENST00000427435 87 ntBASIC0.88□□□□□ -2.27
SRRM4A7MD48 RNU7-45P-201ENST00000459460 63 ntBASIC0.88□□□□□ -2.27
SRRM4A7MD48 TRMT112P2-201ENST00000512910 132 ntBASIC0.88□□□□□ -2.27
SRRM4A7MD48 RNU7-53P-201ENST00000516705 60 ntBASIC0.88□□□□□ -2.27
SRRM4A7MD48 AC008163.1-202ENST00000636004 2889 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms