Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 Y_RNA.251-201ENST00000364551 99 ntBASIC1.13□□□□□ -2.23
SMCHD1A6NHR9 SNORD50.2-201ENST00000365465 70 ntBASIC1.13□□□□□ -2.23
SMCHD1A6NHR9 SNORA25.12-201ENST00000516202 82 ntBASIC1.13□□□□□ -2.23
SMCHD1A6NHR9 RNU6-958P-201ENST00000516995 106 ntBASIC1.13□□□□□ -2.23
SMCHD1A6NHR9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.13□□□□□ -2.23
SMCHD1A6NHR9 SNORA25.3-201ENST00000363205 127 ntBASIC1.12□□□□□ -2.23
SMCHD1A6NHR9 SNORD116-18-201ENST00000383961 92 ntBASIC1.12□□□□□ -2.23
SMCHD1A6NHR9 Y_RNA.547-201ENST00000384654 119 ntBASIC1.12□□□□□ -2.23
SMCHD1A6NHR9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.12□□□□□ -2.23
SMCHD1A6NHR9 RNU7-67P-201ENST00000459003 62 ntBASIC1.12□□□□□ -2.23
SMCHD1A6NHR9 RNU7-200P-201ENST00000516105 62 ntBASIC1.12□□□□□ -2.23
SMCHD1A6NHR9 AC133485.4-201ENST00000561835 220 ntBASIC1.12□□□□□ -2.23
SMCHD1A6NHR9 CYP3A52P-201ENST00000563326 91 ntBASIC1.12□□□□□ -2.23
SMCHD1A6NHR9 AC138907.4-201ENST00000570107 226 ntBASIC1.12□□□□□ -2.23
SMCHD1A6NHR9 AC021753.1-201ENST00000635724 168 ntBASIC1.12□□□□□ -2.23
SMCHD1A6NHR9 MIR4251-201ENST00000635819 61 ntBASIC1.12□□□□□ -2.23
SMCHD1A6NHR9 SNORA1.1-201ENST00000364671 133 ntBASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 RNU6-1336P-201ENST00000383886 109 ntBASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 SNORA25-201ENST00000384384 134 ntBASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 Y_RNA.555-201ENST00000384673 110 ntBASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 MIR532-201ENST00000385025 91 ntBASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 RNU6-613P-201ENST00000410412 108 ntBASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 MIR3973-201ENST00000579824 107 ntBASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 AC104465.1-201ENST00000611365 139 ntBASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 MIR6740-201ENST00000618268 113 ntBASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 MIR150-201ENST00000385048 84 ntBASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 snoU13.9-201ENST00000458927 103 ntBASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 RNU7-80P-201ENST00000459562 61 ntBASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 SNORA31.2-201ENST00000516019 134 ntBASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 RNU6-830P-201ENST00000516353 107 ntBASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 MIR6857-201ENST00000613267 93 ntBASIC1.11□□□□□ -2.23
SMCHD1A6NHR9 RNU1-124P-201ENST00000363861 145 ntBASIC1.1□□□□□ -2.23
SMCHD1A6NHR9 Y_RNA.180-201ENST00000363867 113 ntBASIC1.1□□□□□ -2.23
SMCHD1A6NHR9 RNU6-439P-201ENST00000384188 106 ntBASIC1.1□□□□□ -2.23
SMCHD1A6NHR9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.1□□□□□ -2.23
SMCHD1A6NHR9 RNU7-70P-201ENST00000516941 66 ntBASIC1.1□□□□□ -2.23
SMCHD1A6NHR9 AC243994.1-201ENST00000618627 109 ntBASIC1.1□□□□□ -2.23
SMCHD1A6NHR9 Y_RNA.542-201ENST00000384641 111 ntBASIC1.1□□□□□ -2.23
SMCHD1A6NHR9 MIR802-201ENST00000390235 94 ntBASIC1.1□□□□□ -2.23
SMCHD1A6NHR9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
SMCHD1A6NHR9 SNORA75.5-201ENST00000391291 81 ntBASIC1.1□□□□□ -2.23
SMCHD1A6NHR9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.1□□□□□ -2.23
SMCHD1A6NHR9 RNU7-96P-201ENST00000459535 64 ntBASIC1.1□□□□□ -2.23
SMCHD1A6NHR9 AL160236.1-201ENST00000556317 195 ntBASIC1.1□□□□□ -2.23
SMCHD1A6NHR9 AC015688.6-201ENST00000577737 104 ntBASIC1.1□□□□□ -2.23
SMCHD1A6NHR9 RNU6-888P-201ENST00000363010 101 ntBASIC1.09□□□□□ -2.24
SMCHD1A6NHR9 Y_RNA.241-201ENST00000364470 117 ntBASIC1.09□□□□□ -2.24
SMCHD1A6NHR9 RNY1P6-201ENST00000384193 109 ntBASIC1.09□□□□□ -2.24
SMCHD1A6NHR9 RNU6-886P-201ENST00000384319 105 ntBASIC1.09□□□□□ -2.24
SMCHD1A6NHR9 AL603914.1-201ENST00000401964 204 ntBASIC1.09□□□□□ -2.24
SMCHD1A6NHR9 RPS23P4-201ENST00000487908 423 ntBASIC1.09□□□□□ -2.24
SMCHD1A6NHR9 RNU11-2P-201ENST00000516898 142 ntBASIC1.09□□□□□ -2.24
SMCHD1A6NHR9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.09□□□□□ -2.24
SMCHD1A6NHR9 Y_RNA.203-201ENST00000364106 102 ntBASIC1.08□□□□□ -2.24
SMCHD1A6NHR9 RNU6-1130P-201ENST00000365434 107 ntBASIC1.08□□□□□ -2.24
SMCHD1A6NHR9 SNORA2.2-201ENST00000365473 135 ntBASIC1.08□□□□□ -2.24
SMCHD1A6NHR9 SNORD38B-201ENST00000384690 67 ntBASIC1.08□□□□□ -2.24
SMCHD1A6NHR9 AP003716.2-201ENST00000528260 108 ntBASIC1.08□□□□□ -2.24
SMCHD1A6NHR9 MIR4778-201ENST00000577635 80 ntBASIC1.08□□□□□ -2.24
SMCHD1A6NHR9 AP000753.3-201ENST00000604083 169 ntBASIC1.08□□□□□ -2.24
SMCHD1A6NHR9 AL662814.1-201ENST00000617364 121 ntBASIC1.08□□□□□ -2.24
SMCHD1A6NHR9 SNORD38B-202ENST00000625943 69 ntBASIC1.08□□□□□ -2.24
SMCHD1A6NHR9 SNORD113.3-201ENST00000364630 78 ntBASIC1.08□□□□□ -2.24
SMCHD1A6NHR9 Y_RNA.337-201ENST00000365312 102 ntBASIC1.08□□□□□ -2.24
SMCHD1A6NHR9 RNU1-98P-201ENST00000458992 160 ntBASIC1.08□□□□□ -2.24
SMCHD1A6NHR9 RN7SKP179-201ENST00000516126 217 ntBASIC1.08□□□□□ -2.24
SMCHD1A6NHR9 MIR4698-201ENST00000577795 80 ntBASIC1.08□□□□□ -2.24
SMCHD1A6NHR9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.08□□□□□ -2.24
SMCHD1A6NHR9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SMCHD1A6NHR9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.07□□□□□ -2.24
SMCHD1A6NHR9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.07□□□□□ -2.24
SMCHD1A6NHR9 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.07□□□□□ -2.24
SMCHD1A6NHR9 RNU6-508P-201ENST00000363231 103 ntBASIC1.06□□□□□ -2.24
SMCHD1A6NHR9 RNA5SP48-201ENST00000363969 126 ntBASIC1.06□□□□□ -2.24
SMCHD1A6NHR9 RNU6-1292P-201ENST00000383856 107 ntBASIC1.06□□□□□ -2.24
SMCHD1A6NHR9 Y_RNA.580-201ENST00000391004 95 ntBASIC1.06□□□□□ -2.24
SMCHD1A6NHR9 SNORD77.3-201ENST00000391113 65 ntBASIC1.06□□□□□ -2.24
SMCHD1A6NHR9 SNORD111-201ENST00000408139 94 ntBASIC1.06□□□□□ -2.24
SMCHD1A6NHR9 RNU7-90P-201ENST00000459216 62 ntBASIC1.06□□□□□ -2.24
SMCHD1A6NHR9 AL133373.1-201ENST00000497098 94 ntBASIC1.06□□□□□ -2.24
SMCHD1A6NHR9 Y_RNA.692-201ENST00000516627 105 ntBASIC1.06□□□□□ -2.24
SMCHD1A6NHR9 RNU6-1234P-201ENST00000516877 103 ntBASIC1.06□□□□□ -2.24
SMCHD1A6NHR9 RNU6-449P-201ENST00000383914 107 ntBASIC1.06□□□□□ -2.24
SMCHD1A6NHR9 RNU6-959P-201ENST00000384671 107 ntBASIC1.06□□□□□ -2.24
SMCHD1A6NHR9 RNU6-460P-201ENST00000391158 108 ntBASIC1.06□□□□□ -2.24
SMCHD1A6NHR9 Y_RNA.617-201ENST00000410920 90 ntBASIC1.06□□□□□ -2.24
SMCHD1A6NHR9 AL596211.1-201ENST00000569873 2277 ntBASIC1.05□□□□□ -2.24
SMCHD1A6NHR9 MIR518F-201ENST00000384973 87 ntBASIC1.05□□□□□ -2.24
SMCHD1A6NHR9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SMCHD1A6NHR9 RNU7-197P-201ENST00000458836 62 ntBASIC1.05□□□□□ -2.24
SMCHD1A6NHR9 AP001485.1-201ENST00000604799 199 ntBASIC1.05□□□□□ -2.24
SMCHD1A6NHR9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SMCHD1A6NHR9 Y_RNA.280-201ENST00000364765 112 ntBASIC1.05□□□□□ -2.24
SMCHD1A6NHR9 RNU6-690P-201ENST00000365242 106 ntBASIC1.05□□□□□ -2.24
SMCHD1A6NHR9 RNU6-364P-201ENST00000384387 107 ntBASIC1.05□□□□□ -2.24
SMCHD1A6NHR9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SMCHD1A6NHR9 AL591704.2-201ENST00000421658 181 ntBASIC1.05□□□□□ -2.24
SMCHD1A6NHR9 RNU6-893P-201ENST00000458841 100 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms