Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MIR342-201ENST00000362212 99 ntBASIC0.43□□□□□ -2.34
SMIM28A0A1B0GU29 MIR18A-201ENST00000362310 71 ntBASIC0.43□□□□□ -2.34
SMIM28A0A1B0GU29 Y_RNA.76-201ENST00000362931 109 ntBASIC0.43□□□□□ -2.34
SMIM28A0A1B0GU29 RNU4-17P-201ENST00000365598 141 ntBASIC0.43□□□□□ -2.34
SMIM28A0A1B0GU29 RNU6-597P-201ENST00000365620 102 ntBASIC0.43□□□□□ -2.34
SMIM28A0A1B0GU29 RNU6-1189P-201ENST00000383958 107 ntBASIC0.43□□□□□ -2.34
SMIM28A0A1B0GU29 Y_RNA.416-201ENST00000384014 113 ntBASIC0.43□□□□□ -2.34
SMIM28A0A1B0GU29 Y_RNA.466-201ENST00000384294 113 ntBASIC0.43□□□□□ -2.34
SMIM28A0A1B0GU29 RNU6-1237P-201ENST00000384777 107 ntBASIC0.43□□□□□ -2.34
SMIM28A0A1B0GU29 MIR140-201ENST00000385282 100 ntBASIC0.43□□□□□ -2.34
SMIM28A0A1B0GU29 MIR3129-201ENST00000581095 76 ntBASIC0.43□□□□□ -2.34
SMIM28A0A1B0GU29 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.43□□□□□ -2.34
SMIM28A0A1B0GU29 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.43□□□□□ -2.34
SMIM28A0A1B0GU29 MIR30D-201ENST00000362283 70 ntBASIC0.42□□□□□ -2.34
SMIM28A0A1B0GU29 Y_RNA.199-201ENST00000364014 102 ntBASIC0.42□□□□□ -2.34
SMIM28A0A1B0GU29 Y_RNA.410-201ENST00000383992 113 ntBASIC0.42□□□□□ -2.34
SMIM28A0A1B0GU29 SNORA26-201ENST00000391286 122 ntBASIC0.42□□□□□ -2.34
SMIM28A0A1B0GU29 MIR1302-6-201ENST00000408466 90 ntBASIC0.42□□□□□ -2.34
SMIM28A0A1B0GU29 RNU2-38P-201ENST00000410856 79 ntBASIC0.42□□□□□ -2.34
SMIM28A0A1B0GU29 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.42□□□□□ -2.34
SMIM28A0A1B0GU29 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
SMIM28A0A1B0GU29 Y_RNA.679-201ENST00000516416 91 ntBASIC0.42□□□□□ -2.34
SMIM28A0A1B0GU29 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
SMIM28A0A1B0GU29 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.42□□□□□ -2.34
SMIM28A0A1B0GU29 AL442067.1-201ENST00000613261 223 ntBASIC0.42□□□□□ -2.34
SMIM28A0A1B0GU29 Y_RNA.277-201ENST00000364754 102 ntBASIC0.41□□□□□ -2.34
SMIM28A0A1B0GU29 VTRNA1-3-201ENST00000365645 89 ntBASIC0.41□□□□□ -2.34
SMIM28A0A1B0GU29 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
SMIM28A0A1B0GU29 MIR606-201ENST00000384851 96 ntBASIC0.41□□□□□ -2.34
SMIM28A0A1B0GU29 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.41□□□□□ -2.34
SMIM28A0A1B0GU29 MIR18B-201ENST00000454574 71 ntBASIC0.41□□□□□ -2.34
SMIM28A0A1B0GU29 RNU7-185P-201ENST00000459215 60 ntBASIC0.41□□□□□ -2.34
SMIM28A0A1B0GU29 AL117187.1-201ENST00000555482 181 ntBASIC0.41□□□□□ -2.34
SMIM28A0A1B0GU29 MIR5197-201ENST00000583721 112 ntBASIC0.41□□□□□ -2.34
SMIM28A0A1B0GU29 AC006504.6-201ENST00000590142 199 ntBASIC0.41□□□□□ -2.34
SMIM28A0A1B0GU29 AC010487.4-201ENST00000637027 61 ntBASIC0.41□□□□□ -2.34
SMIM28A0A1B0GU29 Y_RNA.176-201ENST00000363815 109 ntBASIC0.4□□□□□ -2.35
SMIM28A0A1B0GU29 Y_RNA.422-201ENST00000384054 114 ntBASIC0.4□□□□□ -2.35
SMIM28A0A1B0GU29 MIR125B2-201ENST00000385128 89 ntBASIC0.4□□□□□ -2.35
SMIM28A0A1B0GU29 MIR938-201ENST00000401216 83 ntBASIC0.4□□□□□ -2.35
SMIM28A0A1B0GU29 RNU7-102P-201ENST00000458948 62 ntBASIC0.4□□□□□ -2.35
SMIM28A0A1B0GU29 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.4□□□□□ -2.35
SMIM28A0A1B0GU29 MIR6717-201ENST00000622747 73 ntBASIC0.4□□□□□ -2.35
SMIM28A0A1B0GU29 AC091932.4-201ENST00000623386 200 ntBASIC0.4□□□□□ -2.35
SMIM28A0A1B0GU29 Y_RNA.352-201ENST00000365439 102 ntBASIC0.39□□□□□ -2.35
SMIM28A0A1B0GU29 MIR1257-201ENST00000408490 117 ntBASIC0.39□□□□□ -2.35
SMIM28A0A1B0GU29 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.39□□□□□ -2.35
SMIM28A0A1B0GU29 RNY3P16-201ENST00000516338 101 ntBASIC0.39□□□□□ -2.35
SMIM28A0A1B0GU29 AL365205.2-201ENST00000594586 68 ntBASIC0.39□□□□□ -2.35
SMIM28A0A1B0GU29 Y_RNA.54-201ENST00000362766 105 ntBASIC0.38□□□□□ -2.35
SMIM28A0A1B0GU29 Y_RNA.351-201ENST00000365436 96 ntBASIC0.38□□□□□ -2.35
SMIM28A0A1B0GU29 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
SMIM28A0A1B0GU29 Y_RNA.542-201ENST00000384641 111 ntBASIC0.38□□□□□ -2.35
SMIM28A0A1B0GU29 RNU4-43P-201ENST00000410628 137 ntBASIC0.38□□□□□ -2.35
SMIM28A0A1B0GU29 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.38□□□□□ -2.35
SMIM28A0A1B0GU29 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.38□□□□□ -2.35
SMIM28A0A1B0GU29 AC090897.1-201ENST00000580909 226 ntBASIC0.38□□□□□ -2.35
SMIM28A0A1B0GU29 SNORD92-201ENST00000585078 85 ntBASIC0.38□□□□□ -2.35
SMIM28A0A1B0GU29 AC008737.2-201ENST00000599446 118 ntBASIC0.38□□□□□ -2.35
SMIM28A0A1B0GU29 RNU6-978P-201ENST00000364371 103 ntBASIC0.37□□□□□ -2.35
SMIM28A0A1B0GU29 RNU6-738P-201ENST00000384531 106 ntBASIC0.37□□□□□ -2.35
SMIM28A0A1B0GU29 MT-TF-201ENST00000387314 71 ntBASIC0.37□□□□□ -2.35
SMIM28A0A1B0GU29 SNORD100-201ENST00000408573 76 ntBASIC0.37□□□□□ -2.35
SMIM28A0A1B0GU29 RN7SKP12-201ENST00000516275 143 ntBASIC0.37□□□□□ -2.35
SMIM28A0A1B0GU29 AL162730.1-201ENST00000605734 292 ntBASIC0.37□□□□□ -2.35
SMIM28A0A1B0GU29 Y_RNA.812-201ENST00000610788 101 ntBASIC0.37□□□□□ -2.35
SMIM28A0A1B0GU29 Y_RNA.784-201ENST00000613803 101 ntBASIC0.37□□□□□ -2.35
SMIM28A0A1B0GU29 Y_RNA.787-201ENST00000616522 101 ntBASIC0.37□□□□□ -2.35
SMIM28A0A1B0GU29 Y_RNA.780-201ENST00000617336 101 ntBASIC0.37□□□□□ -2.35
SMIM28A0A1B0GU29 Y_RNA.801-201ENST00000619005 101 ntBASIC0.37□□□□□ -2.35
SMIM28A0A1B0GU29 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SMIM28A0A1B0GU29 Y_RNA.47-201ENST00000362697 108 ntBASIC0.36□□□□□ -2.35
SMIM28A0A1B0GU29 SNORA63-201ENST00000363450 132 ntBASIC0.36□□□□□ -2.35
SMIM28A0A1B0GU29 Y_RNA.145-201ENST00000363527 102 ntBASIC0.36□□□□□ -2.35
SMIM28A0A1B0GU29 Y_RNA.262-201ENST00000364641 102 ntBASIC0.36□□□□□ -2.35
SMIM28A0A1B0GU29 Y_RNA.292-201ENST00000364904 97 ntBASIC0.36□□□□□ -2.35
SMIM28A0A1B0GU29 RNU6-728P-201ENST00000365375 104 ntBASIC0.36□□□□□ -2.35
SMIM28A0A1B0GU29 MIR193B-201ENST00000384907 83 ntBASIC0.36□□□□□ -2.35
SMIM28A0A1B0GU29 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.36□□□□□ -2.35
SMIM28A0A1B0GU29 AL358176.2-201ENST00000425769 204 ntBASIC0.36□□□□□ -2.35
SMIM28A0A1B0GU29 RNU7-156P-201ENST00000517214 74 ntBASIC0.36□□□□□ -2.35
SMIM28A0A1B0GU29 MIR6779-201ENST00000617283 64 ntBASIC0.36□□□□□ -2.35
SMIM28A0A1B0GU29 AL662814.1-201ENST00000617364 121 ntBASIC0.36□□□□□ -2.35
SMIM28A0A1B0GU29 MIR6841-201ENST00000637129 72 ntBASIC0.36□□□□□ -2.35
SMIM28A0A1B0GU29 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
SMIM28A0A1B0GU29 AL596211.1-201ENST00000569873 2277 ntBASIC0.35□□□□□ -2.35
SMIM28A0A1B0GU29 MIR302B-201ENST00000362188 73 ntBASIC0.35□□□□□ -2.35
SMIM28A0A1B0GU29 Y_RNA.205-201ENST00000364128 113 ntBASIC0.35□□□□□ -2.35
SMIM28A0A1B0GU29 RNU6-1292P-201ENST00000383856 107 ntBASIC0.35□□□□□ -2.35
SMIM28A0A1B0GU29 RNU6-364P-201ENST00000384387 107 ntBASIC0.35□□□□□ -2.35
SMIM28A0A1B0GU29 Y_RNA.562-201ENST00000384695 113 ntBASIC0.35□□□□□ -2.35
SMIM28A0A1B0GU29 MIR7-2-201ENST00000384970 110 ntBASIC0.35□□□□□ -2.35
SMIM28A0A1B0GU29 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
SMIM28A0A1B0GU29 RNU6-493P-201ENST00000391321 108 ntBASIC0.35□□□□□ -2.35
SMIM28A0A1B0GU29 SEPT7P4-201ENST00000437076 306 ntBASIC0.35□□□□□ -2.35
SMIM28A0A1B0GU29 SNORD127-201ENST00000458892 86 ntBASIC0.35□□□□□ -2.35
SMIM28A0A1B0GU29 AC002350.1-201ENST00000490759 375 ntBASIC0.35□□□□□ -2.35
SMIM28A0A1B0GU29 MTND1P19-201ENST00000511780 315 ntBASIC0.35□□□□□ -2.35
SMIM28A0A1B0GU29 MIR8066-201ENST00000617280 78 ntBASIC0.35□□□□□ -2.35
SMIM28A0A1B0GU29 U6.104-201ENST00000637979 90 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms