Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 SNORA22-201ENST00000383907 134 ntBASIC1.03□□□□□ -2.24
KDM3AQ9Y4C1 SNORA24-201ENST00000384096 131 ntBASIC1.03□□□□□ -2.24
KDM3AQ9Y4C1 RNU4-70P-201ENST00000384579 139 ntBASIC1.03□□□□□ -2.24
KDM3AQ9Y4C1 SNORA2B-201ENST00000384583 137 ntBASIC1.03□□□□□ -2.24
KDM3AQ9Y4C1 SNORA22C-201ENST00000384614 134 ntBASIC1.03□□□□□ -2.24
KDM3AQ9Y4C1 RNU6-613P-201ENST00000410412 108 ntBASIC1.03□□□□□ -2.24
KDM3AQ9Y4C1 Y_RNA.626-201ENST00000411288 95 ntBASIC1.03□□□□□ -2.24
KDM3AQ9Y4C1 PDCD5P2-201ENST00000507570 312 ntBASIC1.03□□□□□ -2.24
KDM3AQ9Y4C1 RNA5SP436-201ENST00000516020 115 ntBASIC1.03□□□□□ -2.24
KDM3AQ9Y4C1 SNORA18.4-201ENST00000516440 124 ntBASIC1.03□□□□□ -2.24
KDM3AQ9Y4C1 SNORD36C-201ENST00000516733 66 ntBASIC1.03□□□□□ -2.24
KDM3AQ9Y4C1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.03□□□□□ -2.24
KDM3AQ9Y4C1 AC011921.3-201ENST00000605540 361 ntBASIC1.03□□□□□ -2.24
KDM3AQ9Y4C1 MIR6516-201ENST00000630554 81 ntBASIC1.03□□□□□ -2.24
KDM3AQ9Y4C1 AL391516.1-201ENST00000554380 2449 ntBASIC1.03□□□□□ -2.25
KDM3AQ9Y4C1 Y_RNA.60-201ENST00000362831 98 ntBASIC1.02□□□□□ -2.25
KDM3AQ9Y4C1 Y_RNA.489-201ENST00000384410 101 ntBASIC1.02□□□□□ -2.25
KDM3AQ9Y4C1 Y_RNA.539-201ENST00000384635 107 ntBASIC1.02□□□□□ -2.25
KDM3AQ9Y4C1 Y_RNA.542-201ENST00000384641 111 ntBASIC1.02□□□□□ -2.25
KDM3AQ9Y4C1 SNORD58.1-201ENST00000391313 66 ntBASIC1.02□□□□□ -2.25
KDM3AQ9Y4C1 AL035398.1-201ENST00000430869 322 ntBASIC1.02□□□□□ -2.25
KDM3AQ9Y4C1 AF228730.3-201ENST00000436691 102 ntBASIC1.02□□□□□ -2.25
KDM3AQ9Y4C1 RNU7-96P-201ENST00000459535 64 ntBASIC1.02□□□□□ -2.25
KDM3AQ9Y4C1 RNY3P16-201ENST00000516338 101 ntBASIC1.02□□□□□ -2.25
KDM3AQ9Y4C1 RNU2-4P-201ENST00000606190 192 ntBASIC1.02□□□□□ -2.25
KDM3AQ9Y4C1 AC106800.4-201ENST00000614905 153 ntBASIC1.02□□□□□ -2.25
KDM3AQ9Y4C1 MIR302B-201ENST00000362188 73 ntBASIC1.01□□□□□ -2.25
KDM3AQ9Y4C1 RNU6-923P-201ENST00000364753 107 ntBASIC1.01□□□□□ -2.25
KDM3AQ9Y4C1 Y_RNA.307-201ENST00000365022 117 ntBASIC1.01□□□□□ -2.25
KDM3AQ9Y4C1 RNU6-578P-201ENST00000390980 103 ntBASIC1.01□□□□□ -2.25
KDM3AQ9Y4C1 MIR1302-7-201ENST00000408841 72 ntBASIC1.01□□□□□ -2.25
KDM3AQ9Y4C1 RNU4-43P-201ENST00000410628 137 ntBASIC1.01□□□□□ -2.25
KDM3AQ9Y4C1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.01□□□□□ -2.25
KDM3AQ9Y4C1 RNU7-73P-201ENST00000458743 63 ntBASIC1.01□□□□□ -2.25
KDM3AQ9Y4C1 AL136317.1-201ENST00000612653 226 ntBASIC1.01□□□□□ -2.25
KDM3AQ9Y4C1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.01□□□□□ -2.25
KDM3AQ9Y4C1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KDM3AQ9Y4C1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
KDM3AQ9Y4C1 RNU6-574P-201ENST00000384265 107 ntBASIC1□□□□□ -2.25
KDM3AQ9Y4C1 Y_RNA.494-201ENST00000384432 111 ntBASIC1□□□□□ -2.25
KDM3AQ9Y4C1 MT-TN-201ENST00000387400 73 ntBASIC1□□□□□ -2.25
KDM3AQ9Y4C1 RNU6-938P-201ENST00000411285 103 ntBASIC1□□□□□ -2.25
KDM3AQ9Y4C1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
KDM3AQ9Y4C1 SNORD116-25-201ENST00000516517 92 ntBASIC1□□□□□ -2.25
KDM3AQ9Y4C1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
KDM3AQ9Y4C1 Y_RNA.36-201ENST00000362602 112 ntBASIC0.99□□□□□ -2.25
KDM3AQ9Y4C1 Y_RNA.182-201ENST00000363880 111 ntBASIC0.99□□□□□ -2.25
KDM3AQ9Y4C1 RNU6-654P-201ENST00000364373 107 ntBASIC0.99□□□□□ -2.25
KDM3AQ9Y4C1 SNORD38B-201ENST00000384690 67 ntBASIC0.99□□□□□ -2.25
KDM3AQ9Y4C1 Y_RNA.618-201ENST00000410949 107 ntBASIC0.99□□□□□ -2.25
KDM3AQ9Y4C1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.99□□□□□ -2.25
KDM3AQ9Y4C1 RNU6-561P-201ENST00000516222 102 ntBASIC0.99□□□□□ -2.25
KDM3AQ9Y4C1 RNU6-111P-201ENST00000517179 105 ntBASIC0.99□□□□□ -2.25
KDM3AQ9Y4C1 AC036111.3-201ENST00000526389 112 ntBASIC0.99□□□□□ -2.25
KDM3AQ9Y4C1 CYP3A137P-201ENST00000562436 69 ntBASIC0.99□□□□□ -2.25
KDM3AQ9Y4C1 MIR4264-201ENST00000583520 66 ntBASIC0.99□□□□□ -2.25
KDM3AQ9Y4C1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.99□□□□□ -2.25
KDM3AQ9Y4C1 AC108706.1-201ENST00000611053 297 ntBASIC0.99□□□□□ -2.25
KDM3AQ9Y4C1 SNORD38B-202ENST00000625943 69 ntBASIC0.99□□□□□ -2.25
KDM3AQ9Y4C1 MIR342-201ENST00000362212 99 ntBASIC0.98□□□□□ -2.25
KDM3AQ9Y4C1 Y_RNA.571-201ENST00000384753 98 ntBASIC0.98□□□□□ -2.25
KDM3AQ9Y4C1 SNORD77.3-201ENST00000391113 65 ntBASIC0.98□□□□□ -2.25
KDM3AQ9Y4C1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.98□□□□□ -2.25
KDM3AQ9Y4C1 POLR2J4-204ENST00000418424 324 ntBASIC0.98□□□□□ -2.25
KDM3AQ9Y4C1 RNU7-80P-201ENST00000459562 61 ntBASIC0.98□□□□□ -2.25
KDM3AQ9Y4C1 RNU7-70P-201ENST00000516941 66 ntBASIC0.98□□□□□ -2.25
KDM3AQ9Y4C1 MIR5000-201ENST00000577717 103 ntBASIC0.98□□□□□ -2.25
KDM3AQ9Y4C1 MIR3129-201ENST00000581095 76 ntBASIC0.98□□□□□ -2.25
KDM3AQ9Y4C1 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.98□□□□□ -2.25
KDM3AQ9Y4C1 MIR377-201ENST00000362145 69 ntBASIC0.97□□□□□ -2.25
KDM3AQ9Y4C1 Y_RNA.23-201ENST00000362496 106 ntBASIC0.97□□□□□ -2.25
KDM3AQ9Y4C1 Y_RNA.168-201ENST00000363740 102 ntBASIC0.97□□□□□ -2.25
KDM3AQ9Y4C1 Y_RNA.200-201ENST00000364018 102 ntBASIC0.97□□□□□ -2.25
KDM3AQ9Y4C1 SNORA1.1-201ENST00000364671 133 ntBASIC0.97□□□□□ -2.25
KDM3AQ9Y4C1 Y_RNA.401-201ENST00000383965 117 ntBASIC0.97□□□□□ -2.25
KDM3AQ9Y4C1 Y_RNA.454-201ENST00000384224 113 ntBASIC0.97□□□□□ -2.25
KDM3AQ9Y4C1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.97□□□□□ -2.25
KDM3AQ9Y4C1 RNA5SP261-201ENST00000410536 106 ntBASIC0.97□□□□□ -2.25
KDM3AQ9Y4C1 RPS3AP1-201ENST00000413190 320 ntBASIC0.97□□□□□ -2.25
KDM3AQ9Y4C1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.97□□□□□ -2.25
KDM3AQ9Y4C1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
KDM3AQ9Y4C1 MIR378D2-201ENST00000580636 98 ntBASIC0.97□□□□□ -2.25
KDM3AQ9Y4C1 FAM71BP1-201ENST00000604431 523 ntBASIC0.97□□□□□ -2.25
KDM3AQ9Y4C1 Y_RNA.83-201ENST00000363005 113 ntBASIC0.96□□□□□ -2.26
KDM3AQ9Y4C1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
KDM3AQ9Y4C1 Y_RNA.351-201ENST00000365436 96 ntBASIC0.96□□□□□ -2.26
KDM3AQ9Y4C1 SNORA1-201ENST00000384107 130 ntBASIC0.96□□□□□ -2.26
KDM3AQ9Y4C1 Y_RNA.440-201ENST00000384120 114 ntBASIC0.96□□□□□ -2.26
KDM3AQ9Y4C1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
KDM3AQ9Y4C1 AL138752.1-201ENST00000452964 351 ntBASIC0.96□□□□□ -2.26
KDM3AQ9Y4C1 RNU2-11P-201ENST00000459191 187 ntBASIC0.96□□□□□ -2.26
KDM3AQ9Y4C1 U7.7-201ENST00000459276 60 ntBASIC0.96□□□□□ -2.26
KDM3AQ9Y4C1 RNU6-998P-201ENST00000515894 101 ntBASIC0.96□□□□□ -2.26
KDM3AQ9Y4C1 Y_RNA.680-201ENST00000516441 93 ntBASIC0.96□□□□□ -2.26
KDM3AQ9Y4C1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.96□□□□□ -2.26
KDM3AQ9Y4C1 AC025627.3-201ENST00000582078 182 ntBASIC0.96□□□□□ -2.26
KDM3AQ9Y4C1 Z83818.1-201ENST00000603584 150 ntBASIC0.96□□□□□ -2.26
KDM3AQ9Y4C1 RNU6-94P-201ENST00000607728 107 ntBASIC0.96□□□□□ -2.26
KDM3AQ9Y4C1 SNORD114-2-201ENST00000363953 78 ntBASIC0.95□□□□□ -2.26
KDM3AQ9Y4C1 RNU6-1292P-201ENST00000383856 107 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms