Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 MIR513C-201ENST00000401352 84 ntBASIC1.3□□□□□ -2.2
PKP3Q9Y446 AP1B1P2-201ENST00000416196 106 ntBASIC1.3□□□□□ -2.2
PKP3Q9Y446 BTF3P4-201ENST00000418852 495 ntBASIC1.3□□□□□ -2.2
PKP3Q9Y446 RNU7-73P-201ENST00000458743 63 ntBASIC1.3□□□□□ -2.2
PKP3Q9Y446 RNU2-11P-201ENST00000459191 187 ntBASIC1.3□□□□□ -2.2
PKP3Q9Y446 SCARNA15-202ENST00000516881 127 ntBASIC1.3□□□□□ -2.2
PKP3Q9Y446 MTND5P41-201ENST00000517498 206 ntBASIC1.3□□□□□ -2.2
PKP3Q9Y446 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
PKP3Q9Y446 RNA5SP264-201ENST00000363115 107 ntBASIC1.29□□□□□ -2.2
PKP3Q9Y446 Y_RNA.170-201ENST00000363746 110 ntBASIC1.29□□□□□ -2.2
PKP3Q9Y446 RNU1-133P-201ENST00000364867 167 ntBASIC1.29□□□□□ -2.2
PKP3Q9Y446 Y_RNA.584-201ENST00000391090 114 ntBASIC1.29□□□□□ -2.2
PKP3Q9Y446 RNA5SP458-201ENST00000516188 119 ntBASIC1.29□□□□□ -2.2
PKP3Q9Y446 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.29□□□□□ -2.2
PKP3Q9Y446 MIR548AO-201ENST00000579992 96 ntBASIC1.29□□□□□ -2.2
PKP3Q9Y446 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.29□□□□□ -2.2
PKP3Q9Y446 AC091932.4-201ENST00000623386 200 ntBASIC1.29□□□□□ -2.2
PKP3Q9Y446 AL596211.1-201ENST00000569873 2277 ntBASIC1.29□□□□□ -2.2
PKP3Q9Y446 Y_RNA.400-201ENST00000383963 111 ntBASIC1.28□□□□□ -2.2
PKP3Q9Y446 AC004223.1-201ENST00000479840 271 ntBASIC1.28□□□□□ -2.2
PKP3Q9Y446 RNU6-255P-201ENST00000516957 105 ntBASIC1.28□□□□□ -2.2
PKP3Q9Y446 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.28□□□□□ -2.2
PKP3Q9Y446 AC068338.1-201ENST00000565567 176 ntBASIC1.28□□□□□ -2.2
PKP3Q9Y446 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.28□□□□□ -2.2
PKP3Q9Y446 RNU6-913P-201ENST00000390913 95 ntBASIC1.27□□□□□ -2.21
PKP3Q9Y446 SNORA40.6-201ENST00000391153 128 ntBASIC1.27□□□□□ -2.21
PKP3Q9Y446 MTATP6P21-201ENST00000440681 189 ntBASIC1.27□□□□□ -2.21
PKP3Q9Y446 RNU6-237P-201ENST00000515985 71 ntBASIC1.27□□□□□ -2.21
PKP3Q9Y446 RNU7-200P-201ENST00000516105 62 ntBASIC1.27□□□□□ -2.21
PKP3Q9Y446 AP003716.2-201ENST00000528260 108 ntBASIC1.27□□□□□ -2.21
PKP3Q9Y446 MIR548X2-201ENST00000579776 100 ntBASIC1.27□□□□□ -2.21
PKP3Q9Y446 AL157834.3-201ENST00000615543 103 ntBASIC1.27□□□□□ -2.21
PKP3Q9Y446 Y_RNA.215-201ENST00000364204 112 ntBASIC1.26□□□□□ -2.21
PKP3Q9Y446 SNORD18B-201ENST00000365659 72 ntBASIC1.26□□□□□ -2.21
PKP3Q9Y446 RNU6-910P-201ENST00000390844 107 ntBASIC1.26□□□□□ -2.21
PKP3Q9Y446 MIR1185-1-201ENST00000408598 86 ntBASIC1.26□□□□□ -2.21
PKP3Q9Y446 SNORA25.12-201ENST00000516202 82 ntBASIC1.26□□□□□ -2.21
PKP3Q9Y446 MIR3660-201ENST00000584845 100 ntBASIC1.26□□□□□ -2.21
PKP3Q9Y446 PRELID3BP2-201ENST00000605362 201 ntBASIC1.26□□□□□ -2.21
PKP3Q9Y446 AL020996.3-201ENST00000606617 222 ntBASIC1.26□□□□□ -2.21
PKP3Q9Y446 AL353770.2-201ENST00000620024 78 ntBASIC1.26□□□□□ -2.21
PKP3Q9Y446 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
PKP3Q9Y446 RNA5SP327-201ENST00000362494 101 ntBASIC1.25□□□□□ -2.21
PKP3Q9Y446 RNY1P11-201ENST00000363759 113 ntBASIC1.25□□□□□ -2.21
PKP3Q9Y446 Y_RNA.251-201ENST00000364551 99 ntBASIC1.25□□□□□ -2.21
PKP3Q9Y446 RNU6-1062P-201ENST00000383908 107 ntBASIC1.25□□□□□ -2.21
PKP3Q9Y446 RNU11-2P-201ENST00000516898 142 ntBASIC1.25□□□□□ -2.21
PKP3Q9Y446 SNORA70.22-201ENST00000517160 124 ntBASIC1.25□□□□□ -2.21
PKP3Q9Y446 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.25□□□□□ -2.21
PKP3Q9Y446 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
PKP3Q9Y446 Y_RNA.120-201ENST00000363304 110 ntBASIC1.24□□□□□ -2.21
PKP3Q9Y446 SNORA1.1-201ENST00000364671 133 ntBASIC1.24□□□□□ -2.21
PKP3Q9Y446 RNU6-396P-201ENST00000365369 105 ntBASIC1.24□□□□□ -2.21
PKP3Q9Y446 Y_RNA.488-201ENST00000384403 102 ntBASIC1.24□□□□□ -2.21
PKP3Q9Y446 SNORA80D-201ENST00000384488 135 ntBASIC1.24□□□□□ -2.21
PKP3Q9Y446 MIR222-201ENST00000384992 110 ntBASIC1.24□□□□□ -2.21
PKP3Q9Y446 MIR1302-7-201ENST00000408841 72 ntBASIC1.24□□□□□ -2.21
PKP3Q9Y446 RNA5SP261-201ENST00000410536 106 ntBASIC1.24□□□□□ -2.21
PKP3Q9Y446 AL392103.1-201ENST00000447000 198 ntBASIC1.24□□□□□ -2.21
PKP3Q9Y446 RNU7-197P-201ENST00000458836 62 ntBASIC1.24□□□□□ -2.21
PKP3Q9Y446 RNA5SP236-201ENST00000516169 116 ntBASIC1.24□□□□□ -2.21
PKP3Q9Y446 MIR2115-201ENST00000516657 100 ntBASIC1.24□□□□□ -2.21
PKP3Q9Y446 AL022345.2-201ENST00000606307 135 ntBASIC1.24□□□□□ -2.21
PKP3Q9Y446 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.24□□□□□ -2.21
PKP3Q9Y446 Y_RNA.363-201ENST00000365529 113 ntBASIC1.23□□□□□ -2.21
PKP3Q9Y446 RNY1P5-201ENST00000383890 115 ntBASIC1.23□□□□□ -2.21
PKP3Q9Y446 AL591704.2-201ENST00000421658 181 ntBASIC1.23□□□□□ -2.21
PKP3Q9Y446 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.23□□□□□ -2.21
PKP3Q9Y446 RNY1P6-201ENST00000384193 109 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 SNORA25-201ENST00000384384 134 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 SNORA20-201ENST00000384662 132 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 MIR569-201ENST00000385228 96 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 SNORA75.2-201ENST00000391138 150 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 RNU6-460P-201ENST00000391158 108 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 SNORA75.3-201ENST00000391231 150 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 RNU6-1190P-201ENST00000410811 104 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 HMGN1P33-201ENST00000432945 451 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 RNU7-45P-201ENST00000459460 63 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 SNORD79.1-201ENST00000516069 84 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 Y_RNA.690-201ENST00000516603 95 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 RNU2-60P-201ENST00000517290 128 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 AC019288.1-201ENST00000557918 224 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.22□□□□□ -2.21
PKP3Q9Y446 MIR8055-201ENST00000610739 97 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 SEPT14P17-201ENST00000617978 177 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 Z97988.1-201ENST00000637697 135 ntBASIC1.22□□□□□ -2.21
PKP3Q9Y446 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
PKP3Q9Y446 Y_RNA.330-201ENST00000365230 109 ntBASIC1.21□□□□□ -2.22
PKP3Q9Y446 SNORD12-201ENST00000391002 90 ntBASIC1.21□□□□□ -2.22
PKP3Q9Y446 Y_RNA.686-201ENST00000516548 134 ntBASIC1.21□□□□□ -2.22
PKP3Q9Y446 MIR3152-201ENST00000579801 74 ntBASIC1.21□□□□□ -2.22
PKP3Q9Y446 MIR6516-201ENST00000630554 81 ntBASIC1.21□□□□□ -2.22
PKP3Q9Y446 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
PKP3Q9Y446 RNU6-915P-201ENST00000364943 103 ntBASIC1.2□□□□□ -2.22
PKP3Q9Y446 Y_RNA.343-201ENST00000365354 112 ntBASIC1.2□□□□□ -2.22
PKP3Q9Y446 Y_RNA.420-201ENST00000384043 110 ntBASIC1.2□□□□□ -2.22
PKP3Q9Y446 Y_RNA.506-201ENST00000384494 102 ntBASIC1.2□□□□□ -2.22
PKP3Q9Y446 SNORD38B-201ENST00000384690 67 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms