Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 MIR1270-201ENST00000459320 83 ntBASIC2.03□□□□□ -2.08
SF3B6Q9Y3B4 MIR3618-201ENST00000580330 88 ntBASIC2.03□□□□□ -2.08
SF3B6Q9Y3B4 MIR4435-1-201ENST00000582552 80 ntBASIC2.03□□□□□ -2.08
SF3B6Q9Y3B4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.02□□□□□ -2.09
SF3B6Q9Y3B4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SF3B6Q9Y3B4 MIR449A-201ENST00000362113 91 ntBASIC2.02□□□□□ -2.09
SF3B6Q9Y3B4 RNU6-766P-201ENST00000362478 107 ntBASIC2.02□□□□□ -2.09
SF3B6Q9Y3B4 SNORA19.1-201ENST00000410656 129 ntBASIC2.02□□□□□ -2.09
SF3B6Q9Y3B4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.02□□□□□ -2.09
SF3B6Q9Y3B4 MIR203B-201ENST00000636080 86 ntBASIC2.02□□□□□ -2.09
SF3B6Q9Y3B4 Z97988.1-201ENST00000637697 135 ntBASIC2.02□□□□□ -2.09
SF3B6Q9Y3B4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 SNORD115-19-201ENST00000363098 82 ntBASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 SNORD115-18-201ENST00000363293 82 ntBASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 SNORD115-17-201ENST00000364612 82 ntBASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 RNA5SP37-201ENST00000365420 130 ntBASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 AC005908.1-201ENST00000468701 347 ntBASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 AC090255.1-201ENST00000495779 349 ntBASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 RNA5SP170-201ENST00000517150 101 ntBASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 RNU6-537P-201ENST00000517277 103 ntBASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 MIR5007-201ENST00000583098 95 ntBASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 AC103810.8-201ENST00000607347 118 ntBASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 MIR8063-201ENST00000621930 81 ntBASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 AC131280.1-202ENST00000624067 4211 ntBASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SF3B6Q9Y3B4 AL596028.1-201ENST00000326971 197 ntBASIC2□□□□□ -2.09
SF3B6Q9Y3B4 RNU4-82P-201ENST00000362443 140 ntBASIC2□□□□□ -2.09
SF3B6Q9Y3B4 RNU6-616P-201ENST00000384353 107 ntBASIC2□□□□□ -2.09
SF3B6Q9Y3B4 RNU6-342P-201ENST00000384521 104 ntBASIC2□□□□□ -2.09
SF3B6Q9Y3B4 RNA5SP338-201ENST00000410495 85 ntBASIC2□□□□□ -2.09
SF3B6Q9Y3B4 RNU6-602P-201ENST00000411155 105 ntBASIC2□□□□□ -2.09
SF3B6Q9Y3B4 AC245047.7-201ENST00000440265 293 ntBASIC2□□□□□ -2.09
SF3B6Q9Y3B4 AC009474.2-201ENST00000451383 136 ntBASIC2□□□□□ -2.09
SF3B6Q9Y3B4 Y_RNA.677-201ENST00000516401 85 ntBASIC2□□□□□ -2.09
SF3B6Q9Y3B4 AC141557.1-201ENST00000540982 400 ntBASIC2□□□□□ -2.09
SF3B6Q9Y3B4 MIR3192-201ENST00000584920 77 ntBASIC2□□□□□ -2.09
SF3B6Q9Y3B4 MIR8065-201ENST00000620577 100 ntBASIC2□□□□□ -2.09
SF3B6Q9Y3B4 AC064859.1-201ENST00000624741 174 ntBASIC2□□□□□ -2.09
SF3B6Q9Y3B4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SF3B6Q9Y3B4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SF3B6Q9Y3B4 RNU6-301P-201ENST00000384277 107 ntBASIC1.99□□□□□ -2.09
SF3B6Q9Y3B4 AC019129.1-201ENST00000403786 261 ntBASIC1.99□□□□□ -2.09
SF3B6Q9Y3B4 MIR1912-201ENST00000410389 80 ntBASIC1.99□□□□□ -2.09
SF3B6Q9Y3B4 RNA5SP508-201ENST00000411327 119 ntBASIC1.99□□□□□ -2.09
SF3B6Q9Y3B4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.99□□□□□ -2.09
SF3B6Q9Y3B4 CYP3A52P-201ENST00000563326 91 ntBASIC1.99□□□□□ -2.09
SF3B6Q9Y3B4 MIR3935-201ENST00000583472 104 ntBASIC1.99□□□□□ -2.09
SF3B6Q9Y3B4 AL096861.1-201ENST00000610899 123 ntBASIC1.99□□□□□ -2.09
SF3B6Q9Y3B4 MIR6895-201ENST00000613497 78 ntBASIC1.99□□□□□ -2.09
SF3B6Q9Y3B4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SF3B6Q9Y3B4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
SF3B6Q9Y3B4 Y_RNA.155-201ENST00000363632 101 ntBASIC1.98□□□□□ -2.09
SF3B6Q9Y3B4 RNU6-1113P-201ENST00000384348 107 ntBASIC1.98□□□□□ -2.09
SF3B6Q9Y3B4 Y_RNA.507-201ENST00000384500 99 ntBASIC1.98□□□□□ -2.09
SF3B6Q9Y3B4 MIR590-201ENST00000385008 97 ntBASIC1.98□□□□□ -2.09
SF3B6Q9Y3B4 SNORD77B-201ENST00000391112 67 ntBASIC1.98□□□□□ -2.09
SF3B6Q9Y3B4 HMGN2P23-201ENST00000456759 269 ntBASIC1.98□□□□□ -2.09
SF3B6Q9Y3B4 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
SF3B6Q9Y3B4 RNU6-947P-201ENST00000516264 106 ntBASIC1.98□□□□□ -2.09
SF3B6Q9Y3B4 RNU6-109P-201ENST00000516364 107 ntBASIC1.98□□□□□ -2.09
SF3B6Q9Y3B4 RNU6-184P-201ENST00000516514 107 ntBASIC1.98□□□□□ -2.09
SF3B6Q9Y3B4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.98□□□□□ -2.09
SF3B6Q9Y3B4 RNU4-67P-201ENST00000364569 141 ntBASIC1.97□□□□□ -2.09
SF3B6Q9Y3B4 RPL23AP94-201ENST00000512518 302 ntBASIC1.97□□□□□ -2.09
SF3B6Q9Y3B4 RNA5SP445-201ENST00000515889 115 ntBASIC1.97□□□□□ -2.09
SF3B6Q9Y3B4 AC046143.2-201ENST00000609789 160 ntBASIC1.97□□□□□ -2.09
SF3B6Q9Y3B4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SF3B6Q9Y3B4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
SF3B6Q9Y3B4 RNU6-363P-201ENST00000362895 105 ntBASIC1.96□□□□□ -2.1
SF3B6Q9Y3B4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.96□□□□□ -2.1
SF3B6Q9Y3B4 SNORA18-201ENST00000384416 132 ntBASIC1.96□□□□□ -2.1
SF3B6Q9Y3B4 MIR605-201ENST00000385078 83 ntBASIC1.96□□□□□ -2.1
SF3B6Q9Y3B4 SNORA7.5-201ENST00000410672 110 ntBASIC1.96□□□□□ -2.1
SF3B6Q9Y3B4 RNU6-250P-201ENST00000516958 103 ntBASIC1.96□□□□□ -2.1
SF3B6Q9Y3B4 AC121758.2-201ENST00000553271 193 ntBASIC1.96□□□□□ -2.1
SF3B6Q9Y3B4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.96□□□□□ -2.1
SF3B6Q9Y3B4 AP001318.4-201ENST00000616637 121 ntBASIC1.96□□□□□ -2.1
SF3B6Q9Y3B4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
SF3B6Q9Y3B4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SF3B6Q9Y3B4 WWP1P1-201ENST00000466609 2769 ntBASIC1.96□□□□□ -2.1
SF3B6Q9Y3B4 SNORA25.3-201ENST00000363205 127 ntBASIC1.95□□□□□ -2.1
SF3B6Q9Y3B4 RNA5SP48-201ENST00000363969 126 ntBASIC1.95□□□□□ -2.1
SF3B6Q9Y3B4 RNA5SP138-201ENST00000365098 114 ntBASIC1.95□□□□□ -2.1
SF3B6Q9Y3B4 Y_RNA.348-201ENST00000365403 103 ntBASIC1.95□□□□□ -2.1
SF3B6Q9Y3B4 RNU6-409P-201ENST00000384114 104 ntBASIC1.95□□□□□ -2.1
SF3B6Q9Y3B4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.95□□□□□ -2.1
SF3B6Q9Y3B4 HSPE1P24-201ENST00000450782 238 ntBASIC1.95□□□□□ -2.1
SF3B6Q9Y3B4 snoU13.9-201ENST00000458927 103 ntBASIC1.95□□□□□ -2.1
SF3B6Q9Y3B4 AC019176.1-201ENST00000518519 225 ntBASIC1.95□□□□□ -2.1
SF3B6Q9Y3B4 AL357312.1-201ENST00000603879 298 ntBASIC1.95□□□□□ -2.1
SF3B6Q9Y3B4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.95□□□□□ -2.1
SF3B6Q9Y3B4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 Y_RNA.43-201ENST00000362670 111 ntBASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 RNA5SP160-201ENST00000364866 120 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms