Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 RNU6-106P-201ENST00000384405 107 ntBASIC2.16□□□□□ -2.06
PTPN22Q9Y2R2 RNU6-296P-201ENST00000384608 107 ntBASIC2.16□□□□□ -2.06
PTPN22Q9Y2R2 RNU6-360P-201ENST00000390944 104 ntBASIC2.16□□□□□ -2.06
PTPN22Q9Y2R2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.16□□□□□ -2.06
PTPN22Q9Y2R2 AC015922.2-201ENST00000435593 184 ntBASIC2.16□□□□□ -2.06
PTPN22Q9Y2R2 AL031737.1-201ENST00000450125 223 ntBASIC2.16□□□□□ -2.06
PTPN22Q9Y2R2 RNU7-95P-201ENST00000459222 64 ntBASIC2.16□□□□□ -2.06
PTPN22Q9Y2R2 snoU13.27-201ENST00000459278 104 ntBASIC2.16□□□□□ -2.06
PTPN22Q9Y2R2 RNU7-34P-201ENST00000459394 64 ntBASIC2.16□□□□□ -2.06
PTPN22Q9Y2R2 RNY4P20-201ENST00000516678 93 ntBASIC2.16□□□□□ -2.06
PTPN22Q9Y2R2 MIR514B-201ENST00000516774 80 ntBASIC2.16□□□□□ -2.06
PTPN22Q9Y2R2 SNORA18.7-201ENST00000516910 131 ntBASIC2.16□□□□□ -2.06
PTPN22Q9Y2R2 RNU6-1116P-201ENST00000517269 99 ntBASIC2.16□□□□□ -2.06
PTPN22Q9Y2R2 SNORD115-40-201ENST00000606510 82 ntBASIC2.16□□□□□ -2.06
PTPN22Q9Y2R2 AC091932.4-201ENST00000623386 200 ntBASIC2.16□□□□□ -2.06
PTPN22Q9Y2R2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
PTPN22Q9Y2R2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
PTPN22Q9Y2R2 RNY4P6-201ENST00000363667 96 ntBASIC2.15□□□□□ -2.07
PTPN22Q9Y2R2 Y_RNA.213-201ENST00000364178 111 ntBASIC2.15□□□□□ -2.07
PTPN22Q9Y2R2 RNU6-1107P-201ENST00000364817 104 ntBASIC2.15□□□□□ -2.07
PTPN22Q9Y2R2 Y_RNA.298-201ENST00000364960 107 ntBASIC2.15□□□□□ -2.07
PTPN22Q9Y2R2 RNU6-1031P-201ENST00000384773 107 ntBASIC2.15□□□□□ -2.07
PTPN22Q9Y2R2 SNORD12C-201ENST00000386307 89 ntBASIC2.15□□□□□ -2.07
PTPN22Q9Y2R2 U8.16-201ENST00000391279 133 ntBASIC2.15□□□□□ -2.07
PTPN22Q9Y2R2 RNU7-96P-201ENST00000459535 64 ntBASIC2.15□□□□□ -2.07
PTPN22Q9Y2R2 RNU6-168P-201ENST00000516189 101 ntBASIC2.15□□□□□ -2.07
PTPN22Q9Y2R2 RNA5SP168-201ENST00000516642 112 ntBASIC2.15□□□□□ -2.07
PTPN22Q9Y2R2 RNA5SP170-201ENST00000517150 101 ntBASIC2.15□□□□□ -2.07
PTPN22Q9Y2R2 AC021443.1-201ENST00000604478 211 ntBASIC2.15□□□□□ -2.07
PTPN22Q9Y2R2 RNU6-94P-201ENST00000607728 107 ntBASIC2.15□□□□□ -2.07
PTPN22Q9Y2R2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PTPN22Q9Y2R2 Y_RNA.323-201ENST00000365157 109 ntBASIC2.14□□□□□ -2.07
PTPN22Q9Y2R2 RNU6-32P-201ENST00000383948 107 ntBASIC2.14□□□□□ -2.07
PTPN22Q9Y2R2 RNU4-52P-201ENST00000384209 138 ntBASIC2.14□□□□□ -2.07
PTPN22Q9Y2R2 RNU6-13P-201ENST00000384248 107 ntBASIC2.14□□□□□ -2.07
PTPN22Q9Y2R2 SNORA27-201ENST00000384323 126 ntBASIC2.14□□□□□ -2.07
PTPN22Q9Y2R2 RNU6-12P-201ENST00000384604 107 ntBASIC2.14□□□□□ -2.07
PTPN22Q9Y2R2 RNU6-41P-201ENST00000384741 107 ntBASIC2.14□□□□□ -2.07
PTPN22Q9Y2R2 MIR676-201ENST00000390702 67 ntBASIC2.14□□□□□ -2.07
PTPN22Q9Y2R2 RNA5SP89-201ENST00000410300 108 ntBASIC2.14□□□□□ -2.07
PTPN22Q9Y2R2 AL356379.1-201ENST00000414105 126 ntBASIC2.14□□□□□ -2.07
PTPN22Q9Y2R2 Y_RNA.694-201ENST00000516677 117 ntBASIC2.14□□□□□ -2.07
PTPN22Q9Y2R2 AL512598.1-201ENST00000610158 273 ntBASIC2.14□□□□□ -2.07
PTPN22Q9Y2R2 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.14□□□□□ -2.07
PTPN22Q9Y2R2 Y_RNA.49-201ENST00000362714 112 ntBASIC2.13□□□□□ -2.07
PTPN22Q9Y2R2 MIR452-201ENST00000385020 85 ntBASIC2.13□□□□□ -2.07
PTPN22Q9Y2R2 RNU6-998P-201ENST00000515894 101 ntBASIC2.13□□□□□ -2.07
PTPN22Q9Y2R2 RNA5SP437-201ENST00000517249 129 ntBASIC2.13□□□□□ -2.07
PTPN22Q9Y2R2 uc_338.28-201ENST00000612082 187 ntBASIC2.13□□□□□ -2.07
PTPN22Q9Y2R2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PTPN22Q9Y2R2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
PTPN22Q9Y2R2 RNU6-392P-201ENST00000364926 101 ntBASIC2.12□□□□□ -2.07
PTPN22Q9Y2R2 Y_RNA.327-201ENST00000365201 102 ntBASIC2.12□□□□□ -2.07
PTPN22Q9Y2R2 SNORA4.2-201ENST00000365313 147 ntBASIC2.12□□□□□ -2.07
PTPN22Q9Y2R2 Y_RNA.549-201ENST00000384657 102 ntBASIC2.12□□□□□ -2.07
PTPN22Q9Y2R2 MIR759-201ENST00000390224 91 ntBASIC2.12□□□□□ -2.07
PTPN22Q9Y2R2 U8.17-201ENST00000391292 132 ntBASIC2.12□□□□□ -2.07
PTPN22Q9Y2R2 RNU6-554P-201ENST00000410466 106 ntBASIC2.12□□□□□ -2.07
PTPN22Q9Y2R2 AL035398.1-201ENST00000430869 322 ntBASIC2.12□□□□□ -2.07
PTPN22Q9Y2R2 RNU7-164P-201ENST00000459221 62 ntBASIC2.12□□□□□ -2.07
PTPN22Q9Y2R2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.12□□□□□ -2.07
PTPN22Q9Y2R2 MIR4305-201ENST00000583252 102 ntBASIC2.12□□□□□ -2.07
PTPN22Q9Y2R2 AL513423.1-201ENST00000621695 132 ntBASIC2.12□□□□□ -2.07
PTPN22Q9Y2R2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PTPN22Q9Y2R2 AL589743.1-201ENST00000551932 2712 ntBASIC2.11□□□□□ -2.07
PTPN22Q9Y2R2 SNORA1.2-201ENST00000365189 134 ntBASIC2.11□□□□□ -2.07
PTPN22Q9Y2R2 Y_RNA.495-201ENST00000384435 112 ntBASIC2.11□□□□□ -2.07
PTPN22Q9Y2R2 RPS29P24-201ENST00000486345 171 ntBASIC2.11□□□□□ -2.07
PTPN22Q9Y2R2 RNU7-123P-201ENST00000515911 60 ntBASIC2.11□□□□□ -2.07
PTPN22Q9Y2R2 MIR4255-201ENST00000579351 72 ntBASIC2.11□□□□□ -2.07
PTPN22Q9Y2R2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 RNU6-766P-201ENST00000362478 107 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 Y_RNA.163-201ENST00000363702 113 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 Y_RNA.241-201ENST00000364470 117 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 Y_RNA.362-201ENST00000365518 110 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 MIR1267-201ENST00000408723 78 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 RNA5SP489-201ENST00000410986 109 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 AC004965.1-201ENST00000413033 213 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 HMGN2P38-201ENST00000423806 265 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 RPS29P11-201ENST00000496507 171 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 RNU7-12P-201ENST00000516030 62 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 RNA5SP480-201ENST00000516840 109 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 RNA5SP364-201ENST00000516938 78 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 SUMO2P16-201ENST00000519475 264 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 AC090821.2-201ENST00000523552 176 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 AC022254.1-201ENST00000567857 235 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 AL035470.1-201ENST00000622571 220 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 AL596211.1-201ENST00000569873 2277 ntBASIC2.1□□□□□ -2.07
PTPN22Q9Y2R2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
PTPN22Q9Y2R2 MIR450A1-201ENST00000362262 91 ntBASIC2.09□□□□□ -2.07
PTPN22Q9Y2R2 RNU6-1014P-201ENST00000383940 103 ntBASIC2.09□□□□□ -2.07
PTPN22Q9Y2R2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PTPN22Q9Y2R2 MIR1302-5-201ENST00000408164 150 ntBASIC2.09□□□□□ -2.07
PTPN22Q9Y2R2 RPL39P34-201ENST00000477141 156 ntBASIC2.09□□□□□ -2.07
PTPN22Q9Y2R2 MIR3163-201ENST00000581592 73 ntBASIC2.09□□□□□ -2.07
PTPN22Q9Y2R2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms