Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.43□□□□□ -2.48
HHLA3Q9XRX5 RNU6-718P-201ENST00000516166 105 ntBASIC-0.43□□□□□ -2.48
HHLA3Q9XRX5 RNU6-397P-201ENST00000516226 104 ntBASIC-0.43□□□□□ -2.48
HHLA3Q9XRX5 RNU6-764P-201ENST00000516396 105 ntBASIC-0.43□□□□□ -2.48
HHLA3Q9XRX5 RNA5SP285-201ENST00000516619 119 ntBASIC-0.43□□□□□ -2.48
HHLA3Q9XRX5 RNU6-365P-201ENST00000517113 106 ntBASIC-0.43□□□□□ -2.48
HHLA3Q9XRX5 AL442067.1-201ENST00000613261 223 ntBASIC-0.43□□□□□ -2.48
HHLA3Q9XRX5 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.43□□□□□ -2.48
HHLA3Q9XRX5 AL596211.1-201ENST00000569873 2277 ntBASIC-0.43□□□□□ -2.48
HHLA3Q9XRX5 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.44□□□□□ -2.48
HHLA3Q9XRX5 SNORA63.5-201ENST00000363548 123 ntBASIC-0.44□□□□□ -2.48
HHLA3Q9XRX5 RNU6-46P-201ENST00000383860 107 ntBASIC-0.44□□□□□ -2.48
HHLA3Q9XRX5 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.44□□□□□ -2.48
HHLA3Q9XRX5 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.44□□□□□ -2.48
HHLA3Q9XRX5 MTND1P14-201ENST00000427400 950 ntBASIC-0.44□□□□□ -2.48
HHLA3Q9XRX5 MTCO2P24-201ENST00000515611 426 ntBASIC-0.44□□□□□ -2.48
HHLA3Q9XRX5 RNU6-475P-201ENST00000516073 104 ntBASIC-0.44□□□□□ -2.48
HHLA3Q9XRX5 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.44□□□□□ -2.48
HHLA3Q9XRX5 IGLVI-20-201ENST00000519296 130 ntBASIC-0.44□□□□□ -2.48
HHLA3Q9XRX5 MIR4677-201ENST00000584153 80 ntBASIC-0.44□□□□□ -2.48
HHLA3Q9XRX5 AC011921.3-201ENST00000605540 361 ntBASIC-0.44□□□□□ -2.48
HHLA3Q9XRX5 AL121655.1-201ENST00000605811 308 ntBASIC-0.44□□□□□ -2.48
HHLA3Q9XRX5 AC013791.1-201ENST00000616619 62 ntBASIC-0.44□□□□□ -2.48
HHLA3Q9XRX5 AL162376.1-201ENST00000624117 175 ntBASIC-0.44□□□□□ -2.48
HHLA3Q9XRX5 MIR302B-201ENST00000362188 73 ntBASIC-0.45□□□□□ -2.48
HHLA3Q9XRX5 MIR367-201ENST00000362299 68 ntBASIC-0.45□□□□□ -2.48
HHLA3Q9XRX5 RNA5SP275-201ENST00000363936 118 ntBASIC-0.45□□□□□ -2.48
HHLA3Q9XRX5 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.45□□□□□ -2.48
HHLA3Q9XRX5 RNA5SP261-201ENST00000410536 106 ntBASIC-0.45□□□□□ -2.48
HHLA3Q9XRX5 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.45□□□□□ -2.48
HHLA3Q9XRX5 RNU6-358P-201ENST00000516564 75 ntBASIC-0.45□□□□□ -2.48
HHLA3Q9XRX5 RNU2-60P-201ENST00000517290 128 ntBASIC-0.45□□□□□ -2.48
HHLA3Q9XRX5 MIR5706-201ENST00000579841 80 ntBASIC-0.45□□□□□ -2.48
HHLA3Q9XRX5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.45□□□□□ -2.48
HHLA3Q9XRX5 RNU6-845P-201ENST00000362578 103 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 SNORD114-31-201ENST00000363219 75 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 RNU6-923P-201ENST00000364753 107 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 SNORA22B-201ENST00000383876 138 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 AC096531.1-201ENST00000419107 107 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 SEPT14P8-201ENST00000508026 178 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 MRPS35P2-201ENST00000508242 191 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 AP003072.1-201ENST00000531740 145 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 MIR4724-201ENST00000579485 89 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 SNORD113-5-201ENST00000607261 78 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 AC006157.1-201ENST00000611750 366 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 AC084782.3-201ENST00000612282 578 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 MIR6514-201ENST00000622549 70 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 MIR376A2-201ENST00000636782 80 ntBASIC-0.46□□□□□ -2.48
HHLA3Q9XRX5 SNORD115-24-201ENST00000363528 82 ntBASIC-0.47□□□□□ -2.48
HHLA3Q9XRX5 RNY1P13-201ENST00000365030 105 ntBASIC-0.47□□□□□ -2.48
HHLA3Q9XRX5 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.47□□□□□ -2.48
HHLA3Q9XRX5 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.47□□□□□ -2.48
HHLA3Q9XRX5 RNA5SP300-201ENST00000391197 107 ntBASIC-0.47□□□□□ -2.48
HHLA3Q9XRX5 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.47□□□□□ -2.48
HHLA3Q9XRX5 AP003733.2-201ENST00000529409 171 ntBASIC-0.47□□□□□ -2.48
HHLA3Q9XRX5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.47□□□□□ -2.48
HHLA3Q9XRX5 MIR5692C2-201ENST00000577959 77 ntBASIC-0.47□□□□□ -2.48
HHLA3Q9XRX5 MIR4645-201ENST00000583158 77 ntBASIC-0.47□□□□□ -2.48
HHLA3Q9XRX5 C8orf59P2-201ENST00000603441 271 ntBASIC-0.47□□□□□ -2.48
HHLA3Q9XRX5 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.48□□□□□ -2.49
HHLA3Q9XRX5 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.48□□□□□ -2.49
HHLA3Q9XRX5 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.48□□□□□ -2.49
HHLA3Q9XRX5 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.48□□□□□ -2.49
HHLA3Q9XRX5 RPL21P38-201ENST00000418090 167 ntBASIC-0.48□□□□□ -2.49
HHLA3Q9XRX5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.48□□□□□ -2.49
HHLA3Q9XRX5 RNU6-531P-201ENST00000516694 104 ntBASIC-0.48□□□□□ -2.49
HHLA3Q9XRX5 RNU7-161P-201ENST00000517289 62 ntBASIC-0.48□□□□□ -2.49
HHLA3Q9XRX5 CR383656.4-201ENST00000546909 122 ntBASIC-0.48□□□□□ -2.49
HHLA3Q9XRX5 AC138749.4-201ENST00000563970 127 ntBASIC-0.48□□□□□ -2.49
HHLA3Q9XRX5 RPS29P30-201ENST00000600975 111 ntBASIC-0.48□□□□□ -2.49
HHLA3Q9XRX5 MIR3666-201ENST00000607845 111 ntBASIC-0.48□□□□□ -2.49
HHLA3Q9XRX5 U7.6-201ENST00000610841 64 ntBASIC-0.48□□□□□ -2.49
HHLA3Q9XRX5 uc_338.28-201ENST00000612082 187 ntBASIC-0.48□□□□□ -2.49
HHLA3Q9XRX5 MIR6841-201ENST00000637129 72 ntBASIC-0.48□□□□□ -2.49
HHLA3Q9XRX5 MIR6759-201ENST00000638110 65 ntBASIC-0.48□□□□□ -2.49
HHLA3Q9XRX5 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 MIR548L-201ENST00000408303 86 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 RNU6-130P-201ENST00000411112 103 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 AC016907.1-201ENST00000419483 435 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 U8.20-201ENST00000459445 131 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 SNORD126-201ENST00000459475 77 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 RNU6-559P-201ENST00000516151 98 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 RNU6-126P-201ENST00000516685 103 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 RNU6-897P-201ENST00000517135 105 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 MIR378D2-201ENST00000580636 98 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 PART1_1.1-201ENST00000611761 217 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.49□□□□□ -2.49
HHLA3Q9XRX5 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.5□□□□□ -2.49
HHLA3Q9XRX5 RNU4-10P-201ENST00000364383 140 ntBASIC-0.5□□□□□ -2.49
HHLA3Q9XRX5 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms