Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 MIR520C-201ENST00000385005 87 ntBASIC1.49□□□□□ -2.17
VPS4AQ9UN37 MIR548M-201ENST00000408260 86 ntBASIC1.49□□□□□ -2.17
VPS4AQ9UN37 AL392103.1-201ENST00000447000 198 ntBASIC1.49□□□□□ -2.17
VPS4AQ9UN37 RPL30P7-201ENST00000479312 323 ntBASIC1.49□□□□□ -2.17
VPS4AQ9UN37 AC023790.1-201ENST00000482174 347 ntBASIC1.49□□□□□ -2.17
VPS4AQ9UN37 RPS29P24-201ENST00000486345 171 ntBASIC1.49□□□□□ -2.17
VPS4AQ9UN37 RNU6-998P-201ENST00000515894 101 ntBASIC1.49□□□□□ -2.17
VPS4AQ9UN37 AC019176.1-201ENST00000518519 225 ntBASIC1.49□□□□□ -2.17
VPS4AQ9UN37 AC090821.2-201ENST00000523552 176 ntBASIC1.49□□□□□ -2.17
VPS4AQ9UN37 MIR4791-201ENST00000607666 84 ntBASIC1.49□□□□□ -2.17
VPS4AQ9UN37 MTND5P32-201ENST00000560711 1802 ntBASIC1.49□□□□□ -2.17
VPS4AQ9UN37 ZNF209P-201ENST00000593450 2304 ntBASIC1.48□□□□□ -2.17
VPS4AQ9UN37 Y_RNA.120-201ENST00000363304 110 ntBASIC1.48□□□□□ -2.17
VPS4AQ9UN37 RNU6-1065P-201ENST00000384513 106 ntBASIC1.48□□□□□ -2.17
VPS4AQ9UN37 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.48□□□□□ -2.17
VPS4AQ9UN37 Y_RNA.584-201ENST00000391090 114 ntBASIC1.48□□□□□ -2.17
VPS4AQ9UN37 MIR513C-201ENST00000401352 84 ntBASIC1.48□□□□□ -2.17
VPS4AQ9UN37 snoU13.25-201ENST00000458945 104 ntBASIC1.48□□□□□ -2.17
VPS4AQ9UN37 RNU7-96P-201ENST00000459535 64 ntBASIC1.48□□□□□ -2.17
VPS4AQ9UN37 AC107297.1-201ENST00000459991 176 ntBASIC1.48□□□□□ -2.17
VPS4AQ9UN37 SNORA31.4-201ENST00000516049 129 ntBASIC1.48□□□□□ -2.17
VPS4AQ9UN37 RNU6-1149P-201ENST00000516810 97 ntBASIC1.48□□□□□ -2.17
VPS4AQ9UN37 MIR3937-201ENST00000580135 106 ntBASIC1.48□□□□□ -2.17
VPS4AQ9UN37 MIR3192-201ENST00000584920 77 ntBASIC1.48□□□□□ -2.17
VPS4AQ9UN37 AC091895.1-201ENST00000624494 256 ntBASIC1.48□□□□□ -2.17
VPS4AQ9UN37 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
VPS4AQ9UN37 RNU6-774P-201ENST00000363238 107 ntBASIC1.47□□□□□ -2.17
VPS4AQ9UN37 RNU6-1067P-201ENST00000384752 107 ntBASIC1.47□□□□□ -2.17
VPS4AQ9UN37 MIR1323-201ENST00000408090 73 ntBASIC1.47□□□□□ -2.17
VPS4AQ9UN37 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.47□□□□□ -2.17
VPS4AQ9UN37 RPS29P29-201ENST00000456396 171 ntBASIC1.47□□□□□ -2.17
VPS4AQ9UN37 RNU1-123P-201ENST00000458950 160 ntBASIC1.47□□□□□ -2.17
VPS4AQ9UN37 RNU7-41P-201ENST00000515917 61 ntBASIC1.47□□□□□ -2.17
VPS4AQ9UN37 AP003716.2-201ENST00000528260 108 ntBASIC1.47□□□□□ -2.17
VPS4AQ9UN37 AL645939.4-201ENST00000604495 135 ntBASIC1.47□□□□□ -2.17
VPS4AQ9UN37 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.47□□□□□ -2.17
VPS4AQ9UN37 AC008133.2-201ENST00000624540 351 ntBASIC1.47□□□□□ -2.17
VPS4AQ9UN37 RNU6-187P-201ENST00000384139 106 ntBASIC1.46□□□□□ -2.18
VPS4AQ9UN37 MIR517C-201ENST00000385103 95 ntBASIC1.46□□□□□ -2.18
VPS4AQ9UN37 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
VPS4AQ9UN37 AL603914.1-201ENST00000401964 204 ntBASIC1.46□□□□□ -2.18
VPS4AQ9UN37 RNU6-1054P-201ENST00000411293 104 ntBASIC1.46□□□□□ -2.18
VPS4AQ9UN37 RNU7-73P-201ENST00000458743 63 ntBASIC1.46□□□□□ -2.18
VPS4AQ9UN37 RNU7-80P-201ENST00000459562 61 ntBASIC1.46□□□□□ -2.18
VPS4AQ9UN37 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS4AQ9UN37 SNORD111.1-201ENST00000516421 86 ntBASIC1.46□□□□□ -2.18
VPS4AQ9UN37 RNU6-426P-201ENST00000516464 97 ntBASIC1.46□□□□□ -2.18
VPS4AQ9UN37 RNA5SP480-201ENST00000516840 109 ntBASIC1.46□□□□□ -2.18
VPS4AQ9UN37 RNA5SP102-201ENST00000516865 106 ntBASIC1.46□□□□□ -2.18
VPS4AQ9UN37 MIR4421-201ENST00000578133 69 ntBASIC1.46□□□□□ -2.18
VPS4AQ9UN37 U8.1-201ENST00000362843 134 ntBASIC1.45□□□□□ -2.18
VPS4AQ9UN37 RNU6-704P-201ENST00000364162 103 ntBASIC1.45□□□□□ -2.18
VPS4AQ9UN37 Y_RNA.351-201ENST00000365436 96 ntBASIC1.45□□□□□ -2.18
VPS4AQ9UN37 SNORA70.7-201ENST00000384159 133 ntBASIC1.45□□□□□ -2.18
VPS4AQ9UN37 MIR1304-201ENST00000408243 91 ntBASIC1.45□□□□□ -2.18
VPS4AQ9UN37 SNORA25.12-201ENST00000516202 82 ntBASIC1.45□□□□□ -2.18
VPS4AQ9UN37 SNORA31.24-201ENST00000517232 57 ntBASIC1.45□□□□□ -2.18
VPS4AQ9UN37 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.45□□□□□ -2.18
VPS4AQ9UN37 RMST_2.1-201ENST00000617263 136 ntBASIC1.45□□□□□ -2.18
VPS4AQ9UN37 AC243994.1-201ENST00000618627 109 ntBASIC1.45□□□□□ -2.18
VPS4AQ9UN37 AC010332.2-201ENST00000613083 1904 ntBASIC1.44□□□□□ -2.18
VPS4AQ9UN37 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS4AQ9UN37 Y_RNA.343-201ENST00000365354 112 ntBASIC1.44□□□□□ -2.18
VPS4AQ9UN37 Y_RNA.420-201ENST00000384043 110 ntBASIC1.44□□□□□ -2.18
VPS4AQ9UN37 MIR570-201ENST00000384917 97 ntBASIC1.44□□□□□ -2.18
VPS4AQ9UN37 RNU6-460P-201ENST00000391158 108 ntBASIC1.44□□□□□ -2.18
VPS4AQ9UN37 AL035398.1-201ENST00000430869 322 ntBASIC1.44□□□□□ -2.18
VPS4AQ9UN37 AL133373.1-201ENST00000497098 94 ntBASIC1.44□□□□□ -2.18
VPS4AQ9UN37 MIR8055-201ENST00000610739 97 ntBASIC1.44□□□□□ -2.18
VPS4AQ9UN37 MIR6078-201ENST00000611069 100 ntBASIC1.44□□□□□ -2.18
VPS4AQ9UN37 AL121890.5-201ENST00000620848 304 ntBASIC1.44□□□□□ -2.18
VPS4AQ9UN37 AC091932.4-201ENST00000623386 200 ntBASIC1.44□□□□□ -2.18
VPS4AQ9UN37 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
VPS4AQ9UN37 Y_RNA.280-201ENST00000364765 112 ntBASIC1.43□□□□□ -2.18
VPS4AQ9UN37 Y_RNA.454-201ENST00000384224 113 ntBASIC1.43□□□□□ -2.18
VPS4AQ9UN37 SNORA51.10-201ENST00000384418 136 ntBASIC1.43□□□□□ -2.18
VPS4AQ9UN37 MIR320A-201ENST00000385302 82 ntBASIC1.43□□□□□ -2.18
VPS4AQ9UN37 MIR1302-7-201ENST00000408841 72 ntBASIC1.43□□□□□ -2.18
VPS4AQ9UN37 snoU13.16-201ENST00000459350 104 ntBASIC1.43□□□□□ -2.18
VPS4AQ9UN37 Y_RNA.651-201ENST00000459380 103 ntBASIC1.43□□□□□ -2.18
VPS4AQ9UN37 Y_RNA.686-201ENST00000516548 134 ntBASIC1.43□□□□□ -2.18
VPS4AQ9UN37 MIR3121-201ENST00000579680 77 ntBASIC1.43□□□□□ -2.18
VPS4AQ9UN37 RNU6-349P-201ENST00000362402 107 ntBASIC1.42□□□□□ -2.18
VPS4AQ9UN37 RNA5SP48-201ENST00000363969 126 ntBASIC1.42□□□□□ -2.18
VPS4AQ9UN37 RNU6-913P-201ENST00000390913 95 ntBASIC1.42□□□□□ -2.18
VPS4AQ9UN37 Y_RNA.586-201ENST00000391146 98 ntBASIC1.42□□□□□ -2.18
VPS4AQ9UN37 RNU6-257P-201ENST00000410238 98 ntBASIC1.42□□□□□ -2.18
VPS4AQ9UN37 MTND4LP9-201ENST00000427694 174 ntBASIC1.42□□□□□ -2.18
VPS4AQ9UN37 MTATP6P21-201ENST00000440681 189 ntBASIC1.42□□□□□ -2.18
VPS4AQ9UN37 RNU6-113P-201ENST00000516653 101 ntBASIC1.42□□□□□ -2.18
VPS4AQ9UN37 PRELID3BP2-201ENST00000605362 201 ntBASIC1.42□□□□□ -2.18
VPS4AQ9UN37 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
VPS4AQ9UN37 AL353770.2-201ENST00000620024 78 ntBASIC1.42□□□□□ -2.18
VPS4AQ9UN37 MIR4251-201ENST00000635819 61 ntBASIC1.42□□□□□ -2.18
VPS4AQ9UN37 RNU6-309P-201ENST00000364573 106 ntBASIC1.41□□□□□ -2.18
VPS4AQ9UN37 RNU6-915P-201ENST00000364943 103 ntBASIC1.41□□□□□ -2.18
VPS4AQ9UN37 SNORA26.6-201ENST00000391256 115 ntBASIC1.41□□□□□ -2.18
VPS4AQ9UN37 RNU7-67P-201ENST00000459003 62 ntBASIC1.41□□□□□ -2.18
VPS4AQ9UN37 RNU2-11P-201ENST00000459191 187 ntBASIC1.41□□□□□ -2.18
VPS4AQ9UN37 RNA5SP272-201ENST00000516095 111 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 202.4 ms