Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SNORD68-201ENST00000363214 84 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 SNORA25.7-201ENST00000364375 127 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 RNU4-38P-201ENST00000364472 129 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 RNA5SP205-201ENST00000364653 136 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 Y_RNA.280-201ENST00000364765 112 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 RNU6-1138P-201ENST00000365359 106 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 SNORD116-14-201ENST00000383894 92 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 SNORD116-17-201ENST00000383929 92 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 SNORD116-15-201ENST00000384445 92 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 RNU6-429P-201ENST00000384582 108 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 SNORD116-19-201ENST00000384729 92 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 MIR520G-201ENST00000385064 90 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 SNORA40.5-201ENST00000391061 128 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 AL049830.1-201ENST00000468034 425 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 RNU6-313P-201ENST00000516317 112 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 RNU6-781P-201ENST00000516377 101 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 RNU6-659P-201ENST00000516454 104 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 AP001328.1-201ENST00000528550 176 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 MIR3646-201ENST00000578301 84 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 FAM106DP-201ENST00000586416 501 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 AL513534.2-201ENST00000603836 250 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 JPX_2.1-201ENST00000614161 69 ntBASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CLIP2Q9UDT6 MIRLET7C-201ENST00000362160 84 ntBASIC1.16□□□□□ -2.22
CLIP2Q9UDT6 RNU6-44P-201ENST00000384045 107 ntBASIC1.16□□□□□ -2.22
CLIP2Q9UDT6 Y_RNA.508-201ENST00000384502 114 ntBASIC1.16□□□□□ -2.22
CLIP2Q9UDT6 Y_RNA.584-201ENST00000391090 114 ntBASIC1.16□□□□□ -2.22
CLIP2Q9UDT6 SNORD77.3-201ENST00000391113 65 ntBASIC1.16□□□□□ -2.22
CLIP2Q9UDT6 AF228730.3-201ENST00000436691 102 ntBASIC1.16□□□□□ -2.22
CLIP2Q9UDT6 STAG3L5P-204ENST00000443759 179 ntBASIC1.16□□□□□ -2.22
CLIP2Q9UDT6 RNU5E-3P-201ENST00000515913 68 ntBASIC1.16□□□□□ -2.22
CLIP2Q9UDT6 SNORA31.4-201ENST00000516049 129 ntBASIC1.16□□□□□ -2.22
CLIP2Q9UDT6 RNU7-25P-201ENST00000516544 62 ntBASIC1.16□□□□□ -2.22
CLIP2Q9UDT6 AP001340.1-201ENST00000624405 217 ntBASIC1.16□□□□□ -2.22
CLIP2Q9UDT6 SNORD3E-202ENST00000627253 216 ntBASIC1.16□□□□□ -2.22
CLIP2Q9UDT6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.15□□□□□ -2.22
CLIP2Q9UDT6 RNU6-80P-201ENST00000384195 107 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 Y_RNA.494-201ENST00000384432 111 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 RNU2-55P-201ENST00000411146 174 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 RNU6-938P-201ENST00000411285 103 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 CALM2P4-201ENST00000430810 426 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 RPS29P1-201ENST00000465274 159 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 RNU4-57P-201ENST00000515980 135 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 RNU6-772P-201ENST00000516042 105 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 RNA5SP236-201ENST00000516169 116 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 RNA5SP153-201ENST00000516498 76 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 RNU6-62P-201ENST00000516526 102 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 SNORD36C-201ENST00000516733 66 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 RNU6-165P-201ENST00000517170 99 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 MIR3121-201ENST00000579680 77 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 MIR548AI-201ENST00000579940 88 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 SNORA4-201ENST00000584302 138 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.15□□□□□ -2.23
CLIP2Q9UDT6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 SNORA63.4-201ENST00000362763 126 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 Y_RNA.114-201ENST00000363265 113 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 RNU6-268P-201ENST00000364174 107 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 RNU6-215P-201ENST00000365169 102 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 RNU6-1081P-201ENST00000384537 107 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 MIR653-201ENST00000385279 96 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 U8.16-201ENST00000391279 133 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 MIR891A-201ENST00000401237 79 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 SNORA79-201ENST00000408376 140 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 AC114811.1-201ENST00000507207 168 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 RNU6-693P-201ENST00000516134 107 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 SNORD33.1-201ENST00000516213 88 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 Y_RNA.690-201ENST00000516603 95 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 RNU7-28P-201ENST00000516759 62 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 SCARNA15-202ENST00000516881 127 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 AC090142.3-201ENST00000519012 385 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 MIR2681-201ENST00000581814 105 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 AL365205.2-201ENST00000594586 68 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 U7.2-201ENST00000607576 63 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 MIR6129-201ENST00000616087 109 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 AC012676.2-201ENST00000619258 186 ntBASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.14□□□□□ -2.23
CLIP2Q9UDT6 MIR373-201ENST00000362273 69 ntBASIC1.13□□□□□ -2.23
CLIP2Q9UDT6 RNU6-888P-201ENST00000363010 101 ntBASIC1.13□□□□□ -2.23
CLIP2Q9UDT6 Y_RNA.353-201ENST00000365440 108 ntBASIC1.13□□□□□ -2.23
CLIP2Q9UDT6 AC008267.6-201ENST00000441664 139 ntBASIC1.13□□□□□ -2.23
CLIP2Q9UDT6 AC093850.1-201ENST00000454121 251 ntBASIC1.13□□□□□ -2.23
CLIP2Q9UDT6 SNORD45.4-201ENST00000516629 73 ntBASIC1.13□□□□□ -2.23
CLIP2Q9UDT6 RNU6-1149P-201ENST00000516810 97 ntBASIC1.13□□□□□ -2.23
CLIP2Q9UDT6 RNU6-365P-201ENST00000517113 106 ntBASIC1.13□□□□□ -2.23
CLIP2Q9UDT6 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
CLIP2Q9UDT6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.13□□□□□ -2.23
CLIP2Q9UDT6 AP002004.2-201ENST00000531656 154 ntBASIC1.13□□□□□ -2.23
CLIP2Q9UDT6 AC131055.1-201ENST00000584626 316 ntBASIC1.13□□□□□ -2.23
CLIP2Q9UDT6 MIR4762-201ENST00000585261 75 ntBASIC1.13□□□□□ -2.23
CLIP2Q9UDT6 AL022345.2-201ENST00000606307 135 ntBASIC1.13□□□□□ -2.23
CLIP2Q9UDT6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.12□□□□□ -2.23
CLIP2Q9UDT6 Y_RNA.81-201ENST00000362997 102 ntBASIC1.12□□□□□ -2.23
CLIP2Q9UDT6 U8.5-201ENST00000364528 136 ntBASIC1.12□□□□□ -2.23
CLIP2Q9UDT6 Y_RNA.265-201ENST00000364677 108 ntBASIC1.12□□□□□ -2.23
CLIP2Q9UDT6 SNORA25-201ENST00000384384 134 ntBASIC1.12□□□□□ -2.23
CLIP2Q9UDT6 Y_RNA.547-201ENST00000384654 119 ntBASIC1.12□□□□□ -2.23
CLIP2Q9UDT6 MIR624-201ENST00000385217 97 ntBASIC1.12□□□□□ -2.23
CLIP2Q9UDT6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CLIP2Q9UDT6 MIR548O-201ENST00000408583 114 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms