Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.74□□□□□ -2.13
DKK3Q9UBP4 RNU6-508P-201ENST00000363231 103 ntBASIC1.74□□□□□ -2.13
DKK3Q9UBP4 RNU6-414P-201ENST00000363705 104 ntBASIC1.74□□□□□ -2.13
DKK3Q9UBP4 Y_RNA.261-201ENST00000364631 102 ntBASIC1.74□□□□□ -2.13
DKK3Q9UBP4 Y_RNA.454-201ENST00000384224 113 ntBASIC1.74□□□□□ -2.13
DKK3Q9UBP4 SNORA27-201ENST00000384323 126 ntBASIC1.74□□□□□ -2.13
DKK3Q9UBP4 MIR516B2-201ENST00000385190 85 ntBASIC1.74□□□□□ -2.13
DKK3Q9UBP4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
DKK3Q9UBP4 MIR1267-201ENST00000408723 78 ntBASIC1.74□□□□□ -2.13
DKK3Q9UBP4 RNU4-62P-201ENST00000410125 130 ntBASIC1.74□□□□□ -2.13
DKK3Q9UBP4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.74□□□□□ -2.13
DKK3Q9UBP4 SNORA18.7-201ENST00000516910 131 ntBASIC1.74□□□□□ -2.13
DKK3Q9UBP4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.74□□□□□ -2.13
DKK3Q9UBP4 MIR3618-201ENST00000580330 88 ntBASIC1.74□□□□□ -2.13
DKK3Q9UBP4 Y_RNA.241-201ENST00000364470 117 ntBASIC1.73□□□□□ -2.13
DKK3Q9UBP4 Y_RNA.351-201ENST00000365436 96 ntBASIC1.73□□□□□ -2.13
DKK3Q9UBP4 MIR653-201ENST00000385279 96 ntBASIC1.73□□□□□ -2.13
DKK3Q9UBP4 Y_RNA.629-201ENST00000411368 105 ntBASIC1.73□□□□□ -2.13
DKK3Q9UBP4 RNU7-107P-201ENST00000459121 61 ntBASIC1.73□□□□□ -2.13
DKK3Q9UBP4 AC107297.1-201ENST00000459991 176 ntBASIC1.73□□□□□ -2.13
DKK3Q9UBP4 RNA5SP220-201ENST00000516298 104 ntBASIC1.73□□□□□ -2.13
DKK3Q9UBP4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.73□□□□□ -2.13
DKK3Q9UBP4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.72□□□□□ -2.13
DKK3Q9UBP4 RNU6-834P-201ENST00000362367 110 ntBASIC1.72□□□□□ -2.13
DKK3Q9UBP4 RNU6-235P-201ENST00000362644 107 ntBASIC1.72□□□□□ -2.13
DKK3Q9UBP4 MIR1276-201ENST00000408707 83 ntBASIC1.72□□□□□ -2.13
DKK3Q9UBP4 RNU7-96P-201ENST00000459535 64 ntBASIC1.72□□□□□ -2.13
DKK3Q9UBP4 RNU2-13P-201ENST00000515909 113 ntBASIC1.72□□□□□ -2.13
DKK3Q9UBP4 RNU7-181P-201ENST00000517234 74 ntBASIC1.72□□□□□ -2.13
DKK3Q9UBP4 SNORA77B-201ENST00000578179 125 ntBASIC1.72□□□□□ -2.13
DKK3Q9UBP4 AL359881.1-201ENST00000602916 267 ntBASIC1.72□□□□□ -2.13
DKK3Q9UBP4 MIR502-201ENST00000606349 86 ntBASIC1.72□□□□□ -2.13
DKK3Q9UBP4 AL512598.1-201ENST00000610158 273 ntBASIC1.72□□□□□ -2.13
DKK3Q9UBP4 MIR6734-201ENST00000621166 68 ntBASIC1.72□□□□□ -2.13
DKK3Q9UBP4 AC095038.3-201ENST00000634439 195 ntBASIC1.72□□□□□ -2.13
DKK3Q9UBP4 RNU6-349P-201ENST00000362402 107 ntBASIC1.71□□□□□ -2.14
DKK3Q9UBP4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.71□□□□□ -2.14
DKK3Q9UBP4 Y_RNA.273-201ENST00000364703 102 ntBASIC1.71□□□□□ -2.14
DKK3Q9UBP4 Y_RNA.370-201ENST00000365589 108 ntBASIC1.71□□□□□ -2.14
DKK3Q9UBP4 SNORD123-201ENST00000459473 70 ntBASIC1.71□□□□□ -2.14
DKK3Q9UBP4 RPS29P24-201ENST00000486345 171 ntBASIC1.71□□□□□ -2.14
DKK3Q9UBP4 RNU6-998P-201ENST00000515894 101 ntBASIC1.71□□□□□ -2.14
DKK3Q9UBP4 RNU7-70P-201ENST00000516941 66 ntBASIC1.71□□□□□ -2.14
DKK3Q9UBP4 SNORA74.3-201ENST00000517108 154 ntBASIC1.71□□□□□ -2.14
DKK3Q9UBP4 MIR8081-201ENST00000611533 95 ntBASIC1.71□□□□□ -2.14
DKK3Q9UBP4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.71□□□□□ -2.14
DKK3Q9UBP4 MIR3914-2-201ENST00000637339 95 ntBASIC1.71□□□□□ -2.14
DKK3Q9UBP4 ICE2P2-201ENST00000483823 2787 ntBASIC1.7□□□□□ -2.14
DKK3Q9UBP4 RNU1-133P-201ENST00000364867 167 ntBASIC1.7□□□□□ -2.14
DKK3Q9UBP4 SNORA24-201ENST00000384096 131 ntBASIC1.7□□□□□ -2.14
DKK3Q9UBP4 Y_RNA.494-201ENST00000384432 111 ntBASIC1.7□□□□□ -2.14
DKK3Q9UBP4 MIRLET7F2-201ENST00000385277 83 ntBASIC1.7□□□□□ -2.14
DKK3Q9UBP4 RN7SKP19-201ENST00000516016 252 ntBASIC1.7□□□□□ -2.14
DKK3Q9UBP4 RNU6-772P-201ENST00000516042 105 ntBASIC1.7□□□□□ -2.14
DKK3Q9UBP4 RNU6-917P-201ENST00000516294 104 ntBASIC1.7□□□□□ -2.14
DKK3Q9UBP4 SUMO2P16-201ENST00000519475 264 ntBASIC1.7□□□□□ -2.14
DKK3Q9UBP4 AC090821.2-201ENST00000523552 176 ntBASIC1.7□□□□□ -2.14
DKK3Q9UBP4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.7□□□□□ -2.14
DKK3Q9UBP4 FAM106DP-201ENST00000586416 501 ntBASIC1.7□□□□□ -2.14
DKK3Q9UBP4 MIR8074-201ENST00000615081 81 ntBASIC1.7□□□□□ -2.14
DKK3Q9UBP4 AC091932.4-201ENST00000623386 200 ntBASIC1.7□□□□□ -2.14
DKK3Q9UBP4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
DKK3Q9UBP4 RNU6-1290P-201ENST00000362957 109 ntBASIC1.69□□□□□ -2.14
DKK3Q9UBP4 SNORD114-26-201ENST00000363543 72 ntBASIC1.69□□□□□ -2.14
DKK3Q9UBP4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.69□□□□□ -2.14
DKK3Q9UBP4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
DKK3Q9UBP4 RNU5E-3P-201ENST00000515913 68 ntBASIC1.69□□□□□ -2.14
DKK3Q9UBP4 AC015688.6-201ENST00000577737 104 ntBASIC1.69□□□□□ -2.14
DKK3Q9UBP4 MIR548AR-201ENST00000582191 57 ntBASIC1.69□□□□□ -2.14
DKK3Q9UBP4 AC108081.1-201ENST00000604358 221 ntBASIC1.69□□□□□ -2.14
DKK3Q9UBP4 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.69□□□□□ -2.14
DKK3Q9UBP4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.69□□□□□ -2.14
DKK3Q9UBP4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
DKK3Q9UBP4 RNU6-392P-201ENST00000364926 101 ntBASIC1.68□□□□□ -2.14
DKK3Q9UBP4 SNORD48-201ENST00000364953 64 ntBASIC1.68□□□□□ -2.14
DKK3Q9UBP4 SNORD58C-201ENST00000365223 64 ntBASIC1.68□□□□□ -2.14
DKK3Q9UBP4 SNORA70.7-201ENST00000384159 133 ntBASIC1.68□□□□□ -2.14
DKK3Q9UBP4 RNU6-439P-201ENST00000384188 106 ntBASIC1.68□□□□□ -2.14
DKK3Q9UBP4 RNY1P6-201ENST00000384193 109 ntBASIC1.68□□□□□ -2.14
DKK3Q9UBP4 Y_RNA.537-201ENST00000384626 109 ntBASIC1.68□□□□□ -2.14
DKK3Q9UBP4 RNU6-1067P-201ENST00000384752 107 ntBASIC1.68□□□□□ -2.14
DKK3Q9UBP4 RNU6-735P-201ENST00000410612 107 ntBASIC1.68□□□□□ -2.14
DKK3Q9UBP4 AC133485.4-201ENST00000561835 220 ntBASIC1.68□□□□□ -2.14
DKK3Q9UBP4 AC138907.4-201ENST00000570107 226 ntBASIC1.68□□□□□ -2.14
DKK3Q9UBP4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.68□□□□□ -2.14
DKK3Q9UBP4 AL161722.3-201ENST00000605789 2983 ntBASIC1.68□□□□□ -2.14
DKK3Q9UBP4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.68□□□□□ -2.14
DKK3Q9UBP4 U6.95-201ENST00000636931 70 ntBASIC1.68□□□□□ -2.14
DKK3Q9UBP4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
DKK3Q9UBP4 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
DKK3Q9UBP4 MIR513A1-201ENST00000385138 129 ntBASIC1.67□□□□□ -2.14
DKK3Q9UBP4 AL035398.1-201ENST00000430869 322 ntBASIC1.67□□□□□ -2.14
DKK3Q9UBP4 RPS29P29-201ENST00000456396 171 ntBASIC1.67□□□□□ -2.14
DKK3Q9UBP4 RNU6-322P-201ENST00000516010 103 ntBASIC1.67□□□□□ -2.14
DKK3Q9UBP4 RNU6-1061P-201ENST00000516530 99 ntBASIC1.67□□□□□ -2.14
DKK3Q9UBP4 RNU7-43P-201ENST00000516554 64 ntBASIC1.67□□□□□ -2.14
DKK3Q9UBP4 IGKV1-22-201ENST00000524313 326 ntBASIC1.67□□□□□ -2.14
DKK3Q9UBP4 MIR4452-201ENST00000583004 71 ntBASIC1.67□□□□□ -2.14
DKK3Q9UBP4 AL137067.1-201ENST00000615933 120 ntBASIC1.67□□□□□ -2.14
DKK3Q9UBP4 Y_RNA.353-201ENST00000365440 108 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms