Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.56□□□□□ -2.16
NCKIPSDQ9NZQ3 AC106754.2-201ENST00000623006 233 ntBASIC1.56□□□□□ -2.16
NCKIPSDQ9NZQ3 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
NCKIPSDQ9NZQ3 MIR302D-201ENST00000362275 68 ntBASIC1.55□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-60P-201ENST00000364792 103 ntBASIC1.55□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-1325P-201ENST00000364905 105 ntBASIC1.55□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-1189P-201ENST00000383958 107 ntBASIC1.55□□□□□ -2.16
NCKIPSDQ9NZQ3 SNORD38C-201ENST00000384381 69 ntBASIC1.55□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU1-78P-201ENST00000391248 165 ntBASIC1.55□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-1064P-201ENST00000410626 104 ntBASIC1.55□□□□□ -2.16
NCKIPSDQ9NZQ3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.55□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-917P-201ENST00000516294 104 ntBASIC1.55□□□□□ -2.16
NCKIPSDQ9NZQ3 SNORD36C-201ENST00000516733 66 ntBASIC1.55□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-1149P-201ENST00000516810 97 ntBASIC1.55□□□□□ -2.16
NCKIPSDQ9NZQ3 SCARNA15-202ENST00000516881 127 ntBASIC1.55□□□□□ -2.16
NCKIPSDQ9NZQ3 SNORA31.24-201ENST00000517232 57 ntBASIC1.55□□□□□ -2.16
NCKIPSDQ9NZQ3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
NCKIPSDQ9NZQ3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
NCKIPSDQ9NZQ3 Y_RNA.37-201ENST00000362606 108 ntBASIC1.54□□□□□ -2.16
NCKIPSDQ9NZQ3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.54□□□□□ -2.16
NCKIPSDQ9NZQ3 Y_RNA.346-201ENST00000365385 112 ntBASIC1.54□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-1144P-201ENST00000384247 104 ntBASIC1.54□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.54□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-476P-201ENST00000384726 107 ntBASIC1.54□□□□□ -2.16
NCKIPSDQ9NZQ3 MIR452-201ENST00000385020 85 ntBASIC1.54□□□□□ -2.16
NCKIPSDQ9NZQ3 SNX2P2-201ENST00000424553 323 ntBASIC1.54□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-830P-201ENST00000516353 107 ntBASIC1.54□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-1061P-201ENST00000516530 99 ntBASIC1.54□□□□□ -2.16
NCKIPSDQ9NZQ3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.54□□□□□ -2.16
NCKIPSDQ9NZQ3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
NCKIPSDQ9NZQ3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU6-508P-201ENST00000363231 103 ntBASIC1.53□□□□□ -2.16
NCKIPSDQ9NZQ3 SNORD58C-201ENST00000365223 64 ntBASIC1.53□□□□□ -2.16
NCKIPSDQ9NZQ3 Y_RNA.651-201ENST00000459380 103 ntBASIC1.53□□□□□ -2.16
NCKIPSDQ9NZQ3 AC023790.1-201ENST00000482174 347 ntBASIC1.53□□□□□ -2.16
NCKIPSDQ9NZQ3 RNA5SP445-201ENST00000515889 115 ntBASIC1.53□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU5E-3P-201ENST00000515913 68 ntBASIC1.53□□□□□ -2.16
NCKIPSDQ9NZQ3 RN7SKP19-201ENST00000516016 252 ntBASIC1.53□□□□□ -2.16
NCKIPSDQ9NZQ3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.53□□□□□ -2.16
NCKIPSDQ9NZQ3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
NCKIPSDQ9NZQ3 RNU1-42P-201ENST00000364033 160 ntBASIC1.52□□□□□ -2.17
NCKIPSDQ9NZQ3 SNORA2.2-201ENST00000365473 135 ntBASIC1.52□□□□□ -2.17
NCKIPSDQ9NZQ3 Y_RNA.494-201ENST00000384432 111 ntBASIC1.52□□□□□ -2.17
NCKIPSDQ9NZQ3 Y_RNA.525-201ENST00000384570 113 ntBASIC1.52□□□□□ -2.17
NCKIPSDQ9NZQ3 MIRLET7F2-201ENST00000385277 83 ntBASIC1.52□□□□□ -2.17
NCKIPSDQ9NZQ3 SNORA40.5-201ENST00000391061 128 ntBASIC1.52□□□□□ -2.17
NCKIPSDQ9NZQ3 AL035461.1-201ENST00000421490 332 ntBASIC1.52□□□□□ -2.17
NCKIPSDQ9NZQ3 AC027119.1-201ENST00000440877 241 ntBASIC1.52□□□□□ -2.17
NCKIPSDQ9NZQ3 AC245517.4-201ENST00000448601 281 ntBASIC1.52□□□□□ -2.17
NCKIPSDQ9NZQ3 RPS26P48-201ENST00000491713 339 ntBASIC1.52□□□□□ -2.17
NCKIPSDQ9NZQ3 RNU7-181P-201ENST00000517234 74 ntBASIC1.52□□□□□ -2.17
NCKIPSDQ9NZQ3 AL670379.3-201ENST00000605040 251 ntBASIC1.52□□□□□ -2.17
NCKIPSDQ9NZQ3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
NCKIPSDQ9NZQ3 ZNF209P-201ENST00000593450 2304 ntBASIC1.51□□□□□ -2.17
NCKIPSDQ9NZQ3 MIR320A-201ENST00000385302 82 ntBASIC1.51□□□□□ -2.17
NCKIPSDQ9NZQ3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.51□□□□□ -2.17
NCKIPSDQ9NZQ3 SNORD28B-201ENST00000390993 75 ntBASIC1.51□□□□□ -2.17
NCKIPSDQ9NZQ3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.51□□□□□ -2.17
NCKIPSDQ9NZQ3 MIR1287-201ENST00000408492 90 ntBASIC1.51□□□□□ -2.17
NCKIPSDQ9NZQ3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.51□□□□□ -2.17
NCKIPSDQ9NZQ3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.51□□□□□ -2.17
NCKIPSDQ9NZQ3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.51□□□□□ -2.17
NCKIPSDQ9NZQ3 RNU6-970P-201ENST00000516312 107 ntBASIC1.51□□□□□ -2.17
NCKIPSDQ9NZQ3 RNU7-70P-201ENST00000516941 66 ntBASIC1.51□□□□□ -2.17
NCKIPSDQ9NZQ3 RNU1-92P-201ENST00000517017 135 ntBASIC1.51□□□□□ -2.17
NCKIPSDQ9NZQ3 AP003484.1-201ENST00000530974 250 ntBASIC1.51□□□□□ -2.17
NCKIPSDQ9NZQ3 AL121890.5-201ENST00000620848 304 ntBASIC1.51□□□□□ -2.17
NCKIPSDQ9NZQ3 Y_RNA.440-201ENST00000384120 114 ntBASIC1.5□□□□□ -2.17
NCKIPSDQ9NZQ3 Y_RNA.454-201ENST00000384224 113 ntBASIC1.5□□□□□ -2.17
NCKIPSDQ9NZQ3 MIR499A-201ENST00000384903 122 ntBASIC1.5□□□□□ -2.17
NCKIPSDQ9NZQ3 MIR136-201ENST00000385207 82 ntBASIC1.5□□□□□ -2.17
NCKIPSDQ9NZQ3 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
NCKIPSDQ9NZQ3 RNA5SP136-201ENST00000410906 107 ntBASIC1.5□□□□□ -2.17
NCKIPSDQ9NZQ3 RNU7-80P-201ENST00000459562 61 ntBASIC1.5□□□□□ -2.17
NCKIPSDQ9NZQ3 FAM106DP-201ENST00000586416 501 ntBASIC1.5□□□□□ -2.17
NCKIPSDQ9NZQ3 AC025166.1-201ENST00000612411 163 ntBASIC1.5□□□□□ -2.17
NCKIPSDQ9NZQ3 SNORA7.1-201ENST00000363750 139 ntBASIC1.49□□□□□ -2.17
NCKIPSDQ9NZQ3 RNU6-392P-201ENST00000364926 101 ntBASIC1.49□□□□□ -2.17
NCKIPSDQ9NZQ3 SNORA25.9-201ENST00000365087 128 ntBASIC1.49□□□□□ -2.17
NCKIPSDQ9NZQ3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.49□□□□□ -2.17
NCKIPSDQ9NZQ3 MIR653-201ENST00000385279 96 ntBASIC1.49□□□□□ -2.17
NCKIPSDQ9NZQ3 U8.17-201ENST00000391292 132 ntBASIC1.49□□□□□ -2.17
NCKIPSDQ9NZQ3 Y_RNA.630-201ENST00000411370 108 ntBASIC1.49□□□□□ -2.17
NCKIPSDQ9NZQ3 SNORD123-201ENST00000459473 70 ntBASIC1.49□□□□□ -2.17
NCKIPSDQ9NZQ3 RNU6-322P-201ENST00000516010 103 ntBASIC1.49□□□□□ -2.17
NCKIPSDQ9NZQ3 RNU6-781P-201ENST00000516377 101 ntBASIC1.49□□□□□ -2.17
NCKIPSDQ9NZQ3 SNORA18.7-201ENST00000516910 131 ntBASIC1.49□□□□□ -2.17
NCKIPSDQ9NZQ3 MTND5P34-201ENST00000568888 325 ntBASIC1.49□□□□□ -2.17
NCKIPSDQ9NZQ3 AC108081.1-201ENST00000604358 221 ntBASIC1.49□□□□□ -2.17
NCKIPSDQ9NZQ3 AL645939.4-201ENST00000604495 135 ntBASIC1.49□□□□□ -2.17
NCKIPSDQ9NZQ3 AL137067.1-201ENST00000615933 120 ntBASIC1.49□□□□□ -2.17
NCKIPSDQ9NZQ3 RNU6-44P-201ENST00000384045 107 ntBASIC1.48□□□□□ -2.17
NCKIPSDQ9NZQ3 RNU6-429P-201ENST00000384582 108 ntBASIC1.48□□□□□ -2.17
NCKIPSDQ9NZQ3 MIR548A3-201ENST00000385297 97 ntBASIC1.48□□□□□ -2.17
NCKIPSDQ9NZQ3 SNORD41-201ENST00000386967 70 ntBASIC1.48□□□□□ -2.17
NCKIPSDQ9NZQ3 MIR1323-201ENST00000408090 73 ntBASIC1.48□□□□□ -2.17
NCKIPSDQ9NZQ3 RPS27P16-201ENST00000425758 201 ntBASIC1.48□□□□□ -2.17
NCKIPSDQ9NZQ3 SNORA31.4-201ENST00000516049 129 ntBASIC1.48□□□□□ -2.17
NCKIPSDQ9NZQ3 RNU6-922P-201ENST00000516753 99 ntBASIC1.48□□□□□ -2.17
NCKIPSDQ9NZQ3 Y_RNA.709-201ENST00000516952 92 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms