Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RNU6-1054P-201ENST00000411293 104 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.99□□□□□ -2.25
NDE1Q9NXR1 AC087499.4-201ENST00000448505 178 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 RNU7-67P-201ENST00000459003 62 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 RNU2-13P-201ENST00000515909 113 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 RNU7-40P-201ENST00000516397 64 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 RNU6-958P-201ENST00000516995 106 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD115-40-201ENST00000606510 82 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 RMST_2.1-201ENST00000617263 136 ntBASIC0.99□□□□□ -2.25
NDE1Q9NXR1 SNORD114-22-201ENST00000365423 72 ntBASIC0.98□□□□□ -2.25
NDE1Q9NXR1 Y_RNA.440-201ENST00000384120 114 ntBASIC0.98□□□□□ -2.25
NDE1Q9NXR1 SNORA27-201ENST00000384323 126 ntBASIC0.98□□□□□ -2.25
NDE1Q9NXR1 MIR1302-7-201ENST00000408841 72 ntBASIC0.98□□□□□ -2.25
NDE1Q9NXR1 AC108059.2-201ENST00000434626 151 ntBASIC0.98□□□□□ -2.25
NDE1Q9NXR1 RNA5SP480-201ENST00000516840 109 ntBASIC0.98□□□□□ -2.25
NDE1Q9NXR1 AL365205.2-201ENST00000594586 68 ntBASIC0.98□□□□□ -2.25
NDE1Q9NXR1 AL022345.2-201ENST00000606307 135 ntBASIC0.98□□□□□ -2.25
NDE1Q9NXR1 MIR3658-201ENST00000636291 56 ntBASIC0.98□□□□□ -2.25
NDE1Q9NXR1 RNA5SP264-201ENST00000363115 107 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 Y_RNA.150-201ENST00000363562 102 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 Y_RNA.240-201ENST00000364469 95 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 RNU6-1082P-201ENST00000364574 107 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 RNU6-312P-201ENST00000364629 107 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 Y_RNA.330-201ENST00000365230 109 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 Y_RNA.537-201ENST00000384626 109 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 SNORA40.5-201ENST00000391061 128 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 AC107297.1-201ENST00000459991 176 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 RPS29P24-201ENST00000486345 171 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.97□□□□□ -2.25
NDE1Q9NXR1 AC107027.2-201ENST00000512197 115 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 Y_RNA.662-201ENST00000516028 97 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 SNORA31.4-201ENST00000516049 129 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 Y_RNA.700-201ENST00000516806 100 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 SNORA70.22-201ENST00000517160 124 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 RNU6-794P-201ENST00000517261 64 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 AP003716.2-201ENST00000528260 108 ntBASIC0.97□□□□□ -2.25
NDE1Q9NXR1 RNU6-654P-201ENST00000364373 107 ntBASIC0.96□□□□□ -2.26
NDE1Q9NXR1 Y_RNA.410-201ENST00000383992 113 ntBASIC0.96□□□□□ -2.26
NDE1Q9NXR1 SNORA25-201ENST00000384384 134 ntBASIC0.96□□□□□ -2.26
NDE1Q9NXR1 Y_RNA.542-201ENST00000384641 111 ntBASIC0.96□□□□□ -2.26
NDE1Q9NXR1 RNU6-1067P-201ENST00000384752 107 ntBASIC0.96□□□□□ -2.26
NDE1Q9NXR1 RNU6-913P-201ENST00000390913 95 ntBASIC0.96□□□□□ -2.26
NDE1Q9NXR1 RNA5SP95-201ENST00000410319 137 ntBASIC0.96□□□□□ -2.26
NDE1Q9NXR1 RNU6-1190P-201ENST00000410811 104 ntBASIC0.96□□□□□ -2.26
NDE1Q9NXR1 AC090844.1-201ENST00000422019 156 ntBASIC0.96□□□□□ -2.26
NDE1Q9NXR1 HMGN1P33-201ENST00000432945 451 ntBASIC0.96□□□□□ -2.26
NDE1Q9NXR1 MIR5197-201ENST00000583721 112 ntBASIC0.96□□□□□ -2.26
NDE1Q9NXR1 PRELID3BP2-201ENST00000605362 201 ntBASIC0.96□□□□□ -2.26
NDE1Q9NXR1 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
NDE1Q9NXR1 AC104465.1-201ENST00000611365 139 ntBASIC0.96□□□□□ -2.26
NDE1Q9NXR1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.96□□□□□ -2.26
NDE1Q9NXR1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
NDE1Q9NXR1 RNU4-84P-201ENST00000364200 139 ntBASIC0.95□□□□□ -2.26
NDE1Q9NXR1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
NDE1Q9NXR1 Y_RNA.357-201ENST00000365487 109 ntBASIC0.95□□□□□ -2.26
NDE1Q9NXR1 SNORA24-201ENST00000384096 131 ntBASIC0.95□□□□□ -2.26
NDE1Q9NXR1 RNA5SP127-201ENST00000411051 133 ntBASIC0.95□□□□□ -2.26
NDE1Q9NXR1 RNU2-11P-201ENST00000459191 187 ntBASIC0.95□□□□□ -2.26
NDE1Q9NXR1 RNU7-45P-201ENST00000459460 63 ntBASIC0.95□□□□□ -2.26
NDE1Q9NXR1 SNORD79.1-201ENST00000516069 84 ntBASIC0.95□□□□□ -2.26
NDE1Q9NXR1 RNU6-182P-201ENST00000516970 105 ntBASIC0.95□□□□□ -2.26
NDE1Q9NXR1 RNA5SP404-201ENST00000517118 132 ntBASIC0.95□□□□□ -2.26
NDE1Q9NXR1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.95□□□□□ -2.26
NDE1Q9NXR1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.95□□□□□ -2.26
NDE1Q9NXR1 MIR6515-201ENST00000619843 57 ntBASIC0.95□□□□□ -2.26
NDE1Q9NXR1 AC008163.1-202ENST00000636004 2889 ntBASIC0.94□□□□□ -2.26
NDE1Q9NXR1 MTND5P32-201ENST00000560711 1802 ntBASIC0.94□□□□□ -2.26
NDE1Q9NXR1 RNY1P11-201ENST00000363759 113 ntBASIC0.94□□□□□ -2.26
NDE1Q9NXR1 SNORA25.7-201ENST00000364375 127 ntBASIC0.94□□□□□ -2.26
NDE1Q9NXR1 RNU6-818P-201ENST00000364837 108 ntBASIC0.94□□□□□ -2.26
NDE1Q9NXR1 RNU6-53P-201ENST00000365367 106 ntBASIC0.94□□□□□ -2.26
NDE1Q9NXR1 Y_RNA.351-201ENST00000365436 96 ntBASIC0.94□□□□□ -2.26
NDE1Q9NXR1 Y_RNA.393-201ENST00000383936 102 ntBASIC0.94□□□□□ -2.26
NDE1Q9NXR1 RNU6-998P-201ENST00000515894 101 ntBASIC0.94□□□□□ -2.26
NDE1Q9NXR1 AC023827.1-201ENST00000569247 97 ntBASIC0.94□□□□□ -2.26
NDE1Q9NXR1 MIR6516-201ENST00000630554 81 ntBASIC0.94□□□□□ -2.26
NDE1Q9NXR1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
NDE1Q9NXR1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
NDE1Q9NXR1 AL596211.1-201ENST00000569873 2277 ntBASIC0.93□□□□□ -2.26
NDE1Q9NXR1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.93□□□□□ -2.26
NDE1Q9NXR1 RNU4-38P-201ENST00000364472 129 ntBASIC0.93□□□□□ -2.26
NDE1Q9NXR1 Y_RNA.337-201ENST00000365312 102 ntBASIC0.93□□□□□ -2.26
NDE1Q9NXR1 RNU6-1292P-201ENST00000383856 107 ntBASIC0.93□□□□□ -2.26
NDE1Q9NXR1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
NDE1Q9NXR1 RNU6-239P-201ENST00000390990 99 ntBASIC0.93□□□□□ -2.26
NDE1Q9NXR1 MIR548I3-201ENST00000408378 149 ntBASIC0.93□□□□□ -2.26
NDE1Q9NXR1 RNU6-588P-201ENST00000410281 105 ntBASIC0.93□□□□□ -2.26
NDE1Q9NXR1 AL035398.1-201ENST00000430869 322 ntBASIC0.93□□□□□ -2.26
NDE1Q9NXR1 AL392103.1-201ENST00000447000 198 ntBASIC0.93□□□□□ -2.26
NDE1Q9NXR1 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
NDE1Q9NXR1 RNU6-1149P-201ENST00000516810 97 ntBASIC0.93□□□□□ -2.26
NDE1Q9NXR1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.93□□□□□ -2.26
NDE1Q9NXR1 FTX_2.1-201ENST00000618816 94 ntBASIC0.93□□□□□ -2.26
NDE1Q9NXR1 AC027335.2-201ENST00000624030 375 ntBASIC0.93□□□□□ -2.26
NDE1Q9NXR1 Y_RNA.8-201ENST00000362353 102 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 Y_RNA.270-201ENST00000364693 104 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 Y_RNA.272-201ENST00000364696 102 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 RNU6-1130P-201ENST00000365434 107 ntBASIC0.92□□□□□ -2.26
NDE1Q9NXR1 RNU6-597P-201ENST00000365620 102 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms