Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNU6-998P-201ENST00000515894 101 ntBASIC1.06□□□□□ -2.24
SLC6A13Q9NSD5 RNA5SP102-201ENST00000516865 106 ntBASIC1.06□□□□□ -2.24
SLC6A13Q9NSD5 MIR7111-201ENST00000619751 72 ntBASIC1.06□□□□□ -2.24
SLC6A13Q9NSD5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.06□□□□□ -2.24
SLC6A13Q9NSD5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SLC6A13Q9NSD5 Y_RNA.118-201ENST00000363300 101 ntBASIC1.05□□□□□ -2.24
SLC6A13Q9NSD5 Y_RNA.355-201ENST00000365462 98 ntBASIC1.05□□□□□ -2.24
SLC6A13Q9NSD5 MT-TN-201ENST00000387400 73 ntBASIC1.05□□□□□ -2.24
SLC6A13Q9NSD5 Y_RNA.644-201ENST00000459006 113 ntBASIC1.05□□□□□ -2.24
SLC6A13Q9NSD5 Y_RNA.674-201ENST00000516362 113 ntBASIC1.05□□□□□ -2.24
SLC6A13Q9NSD5 MIR4431-201ENST00000579990 94 ntBASIC1.05□□□□□ -2.24
SLC6A13Q9NSD5 AC131055.1-201ENST00000584626 316 ntBASIC1.05□□□□□ -2.24
SLC6A13Q9NSD5 MIR376A2-201ENST00000636782 80 ntBASIC1.05□□□□□ -2.24
SLC6A13Q9NSD5 Y_RNA.116-201ENST00000363292 103 ntBASIC1.04□□□□□ -2.24
SLC6A13Q9NSD5 RNU6-654P-201ENST00000364373 107 ntBASIC1.04□□□□□ -2.24
SLC6A13Q9NSD5 Y_RNA.233-201ENST00000364407 101 ntBASIC1.04□□□□□ -2.24
SLC6A13Q9NSD5 SNORD124-201ENST00000459577 104 ntBASIC1.04□□□□□ -2.24
SLC6A13Q9NSD5 AC023827.1-201ENST00000569247 97 ntBASIC1.04□□□□□ -2.24
SLC6A13Q9NSD5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
SLC6A13Q9NSD5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SLC6A13Q9NSD5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SLC6A13Q9NSD5 MIR377-201ENST00000362145 69 ntBASIC1.03□□□□□ -2.24
SLC6A13Q9NSD5 Y_RNA.191-201ENST00000363972 113 ntBASIC1.03□□□□□ -2.24
SLC6A13Q9NSD5 RNU6-312P-201ENST00000364629 107 ntBASIC1.03□□□□□ -2.24
SLC6A13Q9NSD5 RNU6-200P-201ENST00000364743 107 ntBASIC1.03□□□□□ -2.24
SLC6A13Q9NSD5 SNORD114-24-201ENST00000365029 72 ntBASIC1.03□□□□□ -2.24
SLC6A13Q9NSD5 MIR518E-201ENST00000385252 88 ntBASIC1.03□□□□□ -2.24
SLC6A13Q9NSD5 RNU6-913P-201ENST00000390913 95 ntBASIC1.03□□□□□ -2.24
SLC6A13Q9NSD5 RNA5SP127-201ENST00000411051 133 ntBASIC1.03□□□□□ -2.24
SLC6A13Q9NSD5 AC006461.1-201ENST00000412637 326 ntBASIC1.03□□□□□ -2.24
SLC6A13Q9NSD5 AL138752.1-201ENST00000452964 351 ntBASIC1.03□□□□□ -2.24
SLC6A13Q9NSD5 RNU2-11P-201ENST00000459191 187 ntBASIC1.03□□□□□ -2.24
SLC6A13Q9NSD5 AC036111.3-201ENST00000526389 112 ntBASIC1.03□□□□□ -2.24
SLC6A13Q9NSD5 AC072026.1-201ENST00000605023 201 ntBASIC1.03□□□□□ -2.24
SLC6A13Q9NSD5 AC106800.4-201ENST00000614905 153 ntBASIC1.03□□□□□ -2.24
SLC6A13Q9NSD5 AL391516.1-201ENST00000554380 2449 ntBASIC1.03□□□□□ -2.25
SLC6A13Q9NSD5 SNORD113.3-201ENST00000364630 78 ntBASIC1.02□□□□□ -2.25
SLC6A13Q9NSD5 MIR624-201ENST00000385217 97 ntBASIC1.02□□□□□ -2.25
SLC6A13Q9NSD5 MIR548I3-201ENST00000408378 149 ntBASIC1.02□□□□□ -2.25
SLC6A13Q9NSD5 Y_RNA.793-201ENST00000411222 111 ntBASIC1.02□□□□□ -2.25
SLC6A13Q9NSD5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.02□□□□□ -2.25
SLC6A13Q9NSD5 RNU6-138P-201ENST00000515952 107 ntBASIC1.02□□□□□ -2.25
SLC6A13Q9NSD5 RNU6-1219P-201ENST00000516143 112 ntBASIC1.02□□□□□ -2.25
SLC6A13Q9NSD5 Y_RNA.700-201ENST00000516806 100 ntBASIC1.02□□□□□ -2.25
SLC6A13Q9NSD5 MIR4264-201ENST00000583520 66 ntBASIC1.02□□□□□ -2.25
SLC6A13Q9NSD5 AP000753.3-201ENST00000604083 169 ntBASIC1.02□□□□□ -2.25
SLC6A13Q9NSD5 MIR8055-201ENST00000610739 97 ntBASIC1.02□□□□□ -2.25
SLC6A13Q9NSD5 Z97988.1-201ENST00000637697 135 ntBASIC1.02□□□□□ -2.25
SLC6A13Q9NSD5 Y_RNA.168-201ENST00000363740 102 ntBASIC1.01□□□□□ -2.25
SLC6A13Q9NSD5 Y_RNA.257-201ENST00000364596 102 ntBASIC1.01□□□□□ -2.25
SLC6A13Q9NSD5 RNU6-597P-201ENST00000365620 102 ntBASIC1.01□□□□□ -2.25
SLC6A13Q9NSD5 Y_RNA.454-201ENST00000384224 113 ntBASIC1.01□□□□□ -2.25
SLC6A13Q9NSD5 RNU6-125P-201ENST00000384505 107 ntBASIC1.01□□□□□ -2.25
SLC6A13Q9NSD5 SNORA2B-201ENST00000384583 137 ntBASIC1.01□□□□□ -2.25
SLC6A13Q9NSD5 MIR942-201ENST00000401111 86 ntBASIC1.01□□□□□ -2.25
SLC6A13Q9NSD5 SNORD111-201ENST00000408139 94 ntBASIC1.01□□□□□ -2.25
SLC6A13Q9NSD5 RNU7-80P-201ENST00000459562 61 ntBASIC1.01□□□□□ -2.25
SLC6A13Q9NSD5 AC022559.1-201ENST00000520905 205 ntBASIC1.01□□□□□ -2.25
SLC6A13Q9NSD5 AP002392.1-201ENST00000537692 208 ntBASIC1.01□□□□□ -2.25
SLC6A13Q9NSD5 MIR4452-201ENST00000583004 71 ntBASIC1.01□□□□□ -2.25
SLC6A13Q9NSD5 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
SLC6A13Q9NSD5 AL020996.3-201ENST00000606617 222 ntBASIC1.01□□□□□ -2.25
SLC6A13Q9NSD5 AC012676.2-201ENST00000619258 186 ntBASIC1.01□□□□□ -2.25
SLC6A13Q9NSD5 MIR342-201ENST00000362212 99 ntBASIC1□□□□□ -2.25
SLC6A13Q9NSD5 SNORA25.7-201ENST00000364375 127 ntBASIC1□□□□□ -2.25
SLC6A13Q9NSD5 Y_RNA.351-201ENST00000365436 96 ntBASIC1□□□□□ -2.25
SLC6A13Q9NSD5 RNA5SP95-201ENST00000410319 137 ntBASIC1□□□□□ -2.25
SLC6A13Q9NSD5 AC090844.1-201ENST00000422019 156 ntBASIC1□□□□□ -2.25
SLC6A13Q9NSD5 FABP5P4-201ENST00000437203 171 ntBASIC1□□□□□ -2.25
SLC6A13Q9NSD5 AC107027.2-201ENST00000512197 115 ntBASIC1□□□□□ -2.25
SLC6A13Q9NSD5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1□□□□□ -2.25
SLC6A13Q9NSD5 HSPE1P19-201ENST00000603327 295 ntBASIC1□□□□□ -2.25
SLC6A13Q9NSD5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1□□□□□ -2.25
SLC6A13Q9NSD5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
SLC6A13Q9NSD5 MIR302B-201ENST00000362188 73 ntBASIC0.99□□□□□ -2.25
SLC6A13Q9NSD5 SNORA1.1-201ENST00000364671 133 ntBASIC0.99□□□□□ -2.25
SLC6A13Q9NSD5 SNORA22-201ENST00000383907 134 ntBASIC0.99□□□□□ -2.25
SLC6A13Q9NSD5 Y_RNA.521-201ENST00000384560 114 ntBASIC0.99□□□□□ -2.25
SLC6A13Q9NSD5 SNORA22C-201ENST00000384614 134 ntBASIC0.99□□□□□ -2.25
SLC6A13Q9NSD5 SEPT7P4-201ENST00000437076 306 ntBASIC0.99□□□□□ -2.25
SLC6A13Q9NSD5 RPS29P28-201ENST00000446439 141 ntBASIC0.99□□□□□ -2.25
SLC6A13Q9NSD5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.99□□□□□ -2.25
SLC6A13Q9NSD5 RNU6-580P-201ENST00000365159 107 ntBASIC0.98□□□□□ -2.25
SLC6A13Q9NSD5 SNORD114-22-201ENST00000365423 72 ntBASIC0.98□□□□□ -2.25
SLC6A13Q9NSD5 Y_RNA.393-201ENST00000383936 102 ntBASIC0.98□□□□□ -2.25
SLC6A13Q9NSD5 SNORD38B-201ENST00000384690 67 ntBASIC0.98□□□□□ -2.25
SLC6A13Q9NSD5 HMGN1P33-201ENST00000432945 451 ntBASIC0.98□□□□□ -2.25
SLC6A13Q9NSD5 RNU7-120P-201ENST00000459334 63 ntBASIC0.98□□□□□ -2.25
SLC6A13Q9NSD5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.98□□□□□ -2.25
SLC6A13Q9NSD5 MIR4661-201ENST00000582720 75 ntBASIC0.98□□□□□ -2.25
SLC6A13Q9NSD5 AC091932.4-201ENST00000623386 200 ntBASIC0.98□□□□□ -2.25
SLC6A13Q9NSD5 SNORD38B-202ENST00000625943 69 ntBASIC0.98□□□□□ -2.25
SLC6A13Q9NSD5 MIR96-201ENST00000362288 78 ntBASIC0.97□□□□□ -2.25
SLC6A13Q9NSD5 Y_RNA.29-201ENST00000362570 113 ntBASIC0.97□□□□□ -2.25
SLC6A13Q9NSD5 RNU6-205P-201ENST00000390858 107 ntBASIC0.97□□□□□ -2.25
SLC6A13Q9NSD5 RNU6-994P-201ENST00000410507 111 ntBASIC0.97□□□□□ -2.25
SLC6A13Q9NSD5 snoU13.18-201ENST00000459483 104 ntBASIC0.97□□□□□ -2.25
SLC6A13Q9NSD5 PDCD5P2-201ENST00000507570 312 ntBASIC0.97□□□□□ -2.25
SLC6A13Q9NSD5 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
SLC6A13Q9NSD5 SNORA4-201ENST00000584302 138 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms