Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 RNU6-197P-201ENST00000516680 100 ntBASIC0.93□□□□□ -2.26
SH2D4AQ9H788 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.93□□□□□ -2.26
SH2D4AQ9H788 AL353621.2-201ENST00000605340 133 ntBASIC0.93□□□□□ -2.26
SH2D4AQ9H788 Y_RNA.65-201ENST00000362846 100 ntBASIC0.92□□□□□ -2.26
SH2D4AQ9H788 Y_RNA.350-201ENST00000365409 98 ntBASIC0.92□□□□□ -2.26
SH2D4AQ9H788 MT-TN-201ENST00000387400 73 ntBASIC0.92□□□□□ -2.26
SH2D4AQ9H788 SNORD89-201ENST00000390981 114 ntBASIC0.92□□□□□ -2.26
SH2D4AQ9H788 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.92□□□□□ -2.26
SH2D4AQ9H788 RNU7-73P-201ENST00000458743 63 ntBASIC0.92□□□□□ -2.26
SH2D4AQ9H788 RNU6-351P-201ENST00000516097 100 ntBASIC0.92□□□□□ -2.26
SH2D4AQ9H788 AC062037.2-201ENST00000610137 73 ntBASIC0.92□□□□□ -2.26
SH2D4AQ9H788 MIR6866-201ENST00000638146 69 ntBASIC0.92□□□□□ -2.26
SH2D4AQ9H788 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
SH2D4AQ9H788 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SH2D4AQ9H788 Y_RNA.20-201ENST00000362479 113 ntBASIC0.91□□□□□ -2.26
SH2D4AQ9H788 RNU6-103P-201ENST00000363686 107 ntBASIC0.91□□□□□ -2.26
SH2D4AQ9H788 RNU6-728P-201ENST00000365375 104 ntBASIC0.91□□□□□ -2.26
SH2D4AQ9H788 MIR598-201ENST00000384868 97 ntBASIC0.91□□□□□ -2.26
SH2D4AQ9H788 MIR613-201ENST00000385248 95 ntBASIC0.91□□□□□ -2.26
SH2D4AQ9H788 RNU6-493P-201ENST00000391321 108 ntBASIC0.91□□□□□ -2.26
SH2D4AQ9H788 AL078595.1-201ENST00000404458 226 ntBASIC0.91□□□□□ -2.26
SH2D4AQ9H788 AL035398.1-201ENST00000430869 322 ntBASIC0.91□□□□□ -2.26
SH2D4AQ9H788 AL138752.1-201ENST00000452964 351 ntBASIC0.91□□□□□ -2.26
SH2D4AQ9H788 MIR3128-201ENST00000581957 66 ntBASIC0.91□□□□□ -2.26
SH2D4AQ9H788 AP000753.3-201ENST00000604083 169 ntBASIC0.91□□□□□ -2.26
SH2D4AQ9H788 U4.1-201ENST00000620349 87 ntBASIC0.91□□□□□ -2.26
SH2D4AQ9H788 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.9□□□□□ -2.27
SH2D4AQ9H788 MIR377-201ENST00000362145 69 ntBASIC0.9□□□□□ -2.27
SH2D4AQ9H788 RNU6-1189P-201ENST00000383958 107 ntBASIC0.9□□□□□ -2.27
SH2D4AQ9H788 Y_RNA.410-201ENST00000383992 113 ntBASIC0.9□□□□□ -2.27
SH2D4AQ9H788 Y_RNA.440-201ENST00000384120 114 ntBASIC0.9□□□□□ -2.27
SH2D4AQ9H788 MIR605-201ENST00000385078 83 ntBASIC0.9□□□□□ -2.27
SH2D4AQ9H788 SNORD77.3-201ENST00000391113 65 ntBASIC0.9□□□□□ -2.27
SH2D4AQ9H788 SNORD58.1-201ENST00000391313 66 ntBASIC0.9□□□□□ -2.27
SH2D4AQ9H788 HMGN1P33-201ENST00000432945 451 ntBASIC0.9□□□□□ -2.27
SH2D4AQ9H788 snoU13.21-201ENST00000459368 105 ntBASIC0.9□□□□□ -2.27
SH2D4AQ9H788 RNU7-53P-201ENST00000516705 60 ntBASIC0.9□□□□□ -2.27
SH2D4AQ9H788 AC133485.1-201ENST00000567176 124 ntBASIC0.9□□□□□ -2.27
SH2D4AQ9H788 AC138907.6-201ENST00000568401 126 ntBASIC0.9□□□□□ -2.27
SH2D4AQ9H788 MIR4744-201ENST00000581563 82 ntBASIC0.9□□□□□ -2.27
SH2D4AQ9H788 MIR4503-201ENST00000582187 83 ntBASIC0.9□□□□□ -2.27
SH2D4AQ9H788 MIR4264-201ENST00000583520 66 ntBASIC0.9□□□□□ -2.27
SH2D4AQ9H788 MIR376A2-201ENST00000636782 80 ntBASIC0.9□□□□□ -2.27
SH2D4AQ9H788 Y_RNA.60-201ENST00000362831 98 ntBASIC0.89□□□□□ -2.27
SH2D4AQ9H788 RNU6-923P-201ENST00000364753 107 ntBASIC0.89□□□□□ -2.27
SH2D4AQ9H788 RNU1-133P-201ENST00000364867 167 ntBASIC0.89□□□□□ -2.27
SH2D4AQ9H788 RNU6-574P-201ENST00000384265 107 ntBASIC0.89□□□□□ -2.27
SH2D4AQ9H788 SNORA79-201ENST00000408376 140 ntBASIC0.89□□□□□ -2.27
SH2D4AQ9H788 AC244023.1-201ENST00000426884 112 ntBASIC0.89□□□□□ -2.27
SH2D4AQ9H788 AC067940.1-201ENST00000458411 300 ntBASIC0.89□□□□□ -2.27
SH2D4AQ9H788 U7.7-201ENST00000459276 60 ntBASIC0.89□□□□□ -2.27
SH2D4AQ9H788 RNU6-998P-201ENST00000515894 101 ntBASIC0.89□□□□□ -2.27
SH2D4AQ9H788 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.89□□□□□ -2.27
SH2D4AQ9H788 MIR3129-201ENST00000581095 76 ntBASIC0.89□□□□□ -2.27
SH2D4AQ9H788 AC242498.1-201ENST00000604134 111 ntBASIC0.89□□□□□ -2.27
SH2D4AQ9H788 7SK.10-201ENST00000621414 298 ntBASIC0.89□□□□□ -2.27
SH2D4AQ9H788 MIR6835-201ENST00000621552 64 ntBASIC0.89□□□□□ -2.27
SH2D4AQ9H788 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
SH2D4AQ9H788 RNU6-580P-201ENST00000365159 107 ntBASIC0.88□□□□□ -2.27
SH2D4AQ9H788 RNU6-196P-201ENST00000384315 107 ntBASIC0.88□□□□□ -2.27
SH2D4AQ9H788 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
SH2D4AQ9H788 RNU4-43P-201ENST00000410628 137 ntBASIC0.88□□□□□ -2.27
SH2D4AQ9H788 RNU6-1190P-201ENST00000410811 104 ntBASIC0.88□□□□□ -2.27
SH2D4AQ9H788 Y_RNA.626-201ENST00000411288 95 ntBASIC0.88□□□□□ -2.27
SH2D4AQ9H788 RNU2-64P-201ENST00000411315 191 ntBASIC0.88□□□□□ -2.27
SH2D4AQ9H788 AL121914.1-201ENST00000450188 156 ntBASIC0.88□□□□□ -2.27
SH2D4AQ9H788 RNU2-11P-201ENST00000459191 187 ntBASIC0.88□□□□□ -2.27
SH2D4AQ9H788 RNU7-96P-201ENST00000459535 64 ntBASIC0.88□□□□□ -2.27
SH2D4AQ9H788 RNU6-1110P-201ENST00000516462 101 ntBASIC0.88□□□□□ -2.27
SH2D4AQ9H788 AC013244.2-201ENST00000603396 103 ntBASIC0.88□□□□□ -2.27
SH2D4AQ9H788 RNU2-4P-201ENST00000606190 192 ntBASIC0.88□□□□□ -2.27
SH2D4AQ9H788 MIR8055-201ENST00000610739 97 ntBASIC0.88□□□□□ -2.27
SH2D4AQ9H788 Y_RNA.7-201ENST00000362352 102 ntBASIC0.87□□□□□ -2.27
SH2D4AQ9H788 RNU6-702P-201ENST00000364982 107 ntBASIC0.87□□□□□ -2.27
SH2D4AQ9H788 Y_RNA.478-201ENST00000384358 107 ntBASIC0.87□□□□□ -2.27
SH2D4AQ9H788 RNU6-578P-201ENST00000390980 103 ntBASIC0.87□□□□□ -2.27
SH2D4AQ9H788 MIR548I3-201ENST00000408378 149 ntBASIC0.87□□□□□ -2.27
SH2D4AQ9H788 MIR1827-201ENST00000408549 66 ntBASIC0.87□□□□□ -2.27
SH2D4AQ9H788 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.87□□□□□ -2.27
SH2D4AQ9H788 MIR4308-201ENST00000580634 81 ntBASIC0.87□□□□□ -2.27
SH2D4AQ9H788 MIR4714-201ENST00000580728 77 ntBASIC0.87□□□□□ -2.27
SH2D4AQ9H788 Z97988.1-201ENST00000637697 135 ntBASIC0.87□□□□□ -2.27
SH2D4AQ9H788 MIR342-201ENST00000362212 99 ntBASIC0.86□□□□□ -2.27
SH2D4AQ9H788 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
SH2D4AQ9H788 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.86□□□□□ -2.27
SH2D4AQ9H788 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
SH2D4AQ9H788 AL353765.1-201ENST00000605514 183 ntBASIC0.86□□□□□ -2.27
SH2D4AQ9H788 PVT1_3.1-201ENST00000620853 95 ntBASIC0.86□□□□□ -2.27
SH2D4AQ9H788 Y_RNA.193-201ENST00000363979 102 ntBASIC0.85□□□□□ -2.27
SH2D4AQ9H788 Y_RNA.307-201ENST00000365022 117 ntBASIC0.85□□□□□ -2.27
SH2D4AQ9H788 Y_RNA.447-201ENST00000384184 113 ntBASIC0.85□□□□□ -2.27
SH2D4AQ9H788 Y_RNA.452-201ENST00000384202 108 ntBASIC0.85□□□□□ -2.27
SH2D4AQ9H788 Y_RNA.542-201ENST00000384641 111 ntBASIC0.85□□□□□ -2.27
SH2D4AQ9H788 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
SH2D4AQ9H788 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
SH2D4AQ9H788 SNORD83.1-201ENST00000411362 77 ntBASIC0.85□□□□□ -2.27
SH2D4AQ9H788 RNU7-62P-201ENST00000458856 62 ntBASIC0.85□□□□□ -2.27
SH2D4AQ9H788 RNU6-1023P-201ENST00000516137 106 ntBASIC0.85□□□□□ -2.27
SH2D4AQ9H788 RNU6-111P-201ENST00000517179 105 ntBASIC0.85□□□□□ -2.27
SH2D4AQ9H788 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms