Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC098934.3-201ENST00000430450 190 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 AC087499.7-201ENST00000441958 109 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.63□□□□□ -2.31
NXF3Q9H4D5 snoU13.16-201ENST00000459350 104 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 snoU13.21-201ENST00000459368 105 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 RNU6-1045P-201ENST00000516321 107 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 RNA5SP480-201ENST00000516840 109 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 AP000942.4-201ENST00000604811 241 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 AC011921.3-201ENST00000605540 361 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 AL442067.1-201ENST00000613261 223 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 AC134878.1-201ENST00000619901 243 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.168-201ENST00000363740 102 ntBASIC0.62□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.262-201ENST00000364641 102 ntBASIC0.62□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.292-201ENST00000364904 97 ntBASIC0.62□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.393-201ENST00000383936 102 ntBASIC0.62□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.477-201ENST00000384352 108 ntBASIC0.62□□□□□ -2.31
NXF3Q9H4D5 RNU2-70P-201ENST00000410718 179 ntBASIC0.62□□□□□ -2.31
NXF3Q9H4D5 AC092628.1-201ENST00000436250 252 ntBASIC0.62□□□□□ -2.31
NXF3Q9H4D5 SNORA18.4-201ENST00000516440 124 ntBASIC0.62□□□□□ -2.31
NXF3Q9H4D5 SNORD36C-201ENST00000516733 66 ntBASIC0.62□□□□□ -2.31
NXF3Q9H4D5 AP003484.1-201ENST00000530974 250 ntBASIC0.62□□□□□ -2.31
NXF3Q9H4D5 AC099654.10-201ENST00000640395 161 ntBASIC0.62□□□□□ -2.31
NXF3Q9H4D5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
NXF3Q9H4D5 MIR377-201ENST00000362145 69 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 SNORD45.3-201ENST00000363836 72 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 RNU6-580P-201ENST00000365159 107 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 RNU4-17P-201ENST00000365598 141 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.410-201ENST00000383992 113 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.466-201ENST00000384294 113 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 SNORA27-201ENST00000384323 126 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 RNU6-125P-201ENST00000384505 107 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 RNU6-205P-201ENST00000390858 107 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 SNORD58.1-201ENST00000391313 66 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 MIR1302-3-201ENST00000408128 138 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 AF228730.3-201ENST00000436691 102 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 RNU7-73P-201ENST00000458743 63 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 RNU7-67P-201ENST00000459003 62 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 U7.7-201ENST00000459276 60 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.61□□□□□ -2.31
NXF3Q9H4D5 MTND1P19-201ENST00000511780 315 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.668-201ENST00000516233 93 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
NXF3Q9H4D5 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.61□□□□□ -2.31
NXF3Q9H4D5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
NXF3Q9H4D5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.6□□□□□ -2.31
NXF3Q9H4D5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
NXF3Q9H4D5 SNORD114-26-201ENST00000363543 72 ntBASIC0.6□□□□□ -2.31
NXF3Q9H4D5 SNORD27-201ENST00000363981 72 ntBASIC0.6□□□□□ -2.31
NXF3Q9H4D5 RNU6-574P-201ENST00000384265 107 ntBASIC0.6□□□□□ -2.31
NXF3Q9H4D5 SNORA2B-201ENST00000384583 137 ntBASIC0.6□□□□□ -2.31
NXF3Q9H4D5 RNU6-913P-201ENST00000390913 95 ntBASIC0.6□□□□□ -2.31
NXF3Q9H4D5 RNU4-43P-201ENST00000410628 137 ntBASIC0.6□□□□□ -2.31
NXF3Q9H4D5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.6□□□□□ -2.31
NXF3Q9H4D5 HMGN1P33-201ENST00000432945 451 ntBASIC0.6□□□□□ -2.31
NXF3Q9H4D5 AL138752.1-201ENST00000452964 351 ntBASIC0.6□□□□□ -2.31
NXF3Q9H4D5 RPS29P24-201ENST00000486345 171 ntBASIC0.6□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.680-201ENST00000516441 93 ntBASIC0.6□□□□□ -2.31
NXF3Q9H4D5 RNU6-1110P-201ENST00000516462 101 ntBASIC0.6□□□□□ -2.31
NXF3Q9H4D5 RNU6-958P-201ENST00000516995 106 ntBASIC0.6□□□□□ -2.31
NXF3Q9H4D5 MIR8055-201ENST00000610739 97 ntBASIC0.6□□□□□ -2.31
NXF3Q9H4D5 AC104465.1-201ENST00000611365 139 ntBASIC0.6□□□□□ -2.31
NXF3Q9H4D5 uc_338.6-201ENST00000613544 171 ntBASIC0.6□□□□□ -2.31
NXF3Q9H4D5 MIR376A2-201ENST00000636782 80 ntBASIC0.6□□□□□ -2.31
NXF3Q9H4D5 RNU6-103P-201ENST00000363686 107 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.199-201ENST00000364014 102 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 RNY4P28-201ENST00000365281 93 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 RNU6-728P-201ENST00000365375 104 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 SNORA1-201ENST00000384107 130 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 SNORD89-201ENST00000390981 114 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 RNA5SP193-201ENST00000410353 107 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 RNU6-733P-201ENST00000410759 104 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 RNU6-1190P-201ENST00000410811 104 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 AL035398.1-201ENST00000430869 322 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 RNU7-53P-201ENST00000516705 60 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 MIR4711-201ENST00000578274 70 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 AC025627.3-201ENST00000582078 182 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 RN7SL793P-201ENST00000583259 296 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 MIR4264-201ENST00000583520 66 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 AP000753.3-201ENST00000604083 169 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 AL353765.1-201ENST00000605514 183 ntBASIC0.59□□□□□ -2.31
NXF3Q9H4D5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
NXF3Q9H4D5 Y_RNA.20-201ENST00000362479 113 ntBASIC0.58□□□□□ -2.32
NXF3Q9H4D5 Y_RNA.23-201ENST00000362496 106 ntBASIC0.58□□□□□ -2.32
NXF3Q9H4D5 Y_RNA.478-201ENST00000384358 107 ntBASIC0.58□□□□□ -2.32
NXF3Q9H4D5 Y_RNA.539-201ENST00000384635 107 ntBASIC0.58□□□□□ -2.32
NXF3Q9H4D5 Y_RNA.542-201ENST00000384641 111 ntBASIC0.58□□□□□ -2.32
NXF3Q9H4D5 MIR216A-201ENST00000385063 110 ntBASIC0.58□□□□□ -2.32
NXF3Q9H4D5 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
NXF3Q9H4D5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.58□□□□□ -2.32
NXF3Q9H4D5 AC067940.1-201ENST00000458411 300 ntBASIC0.58□□□□□ -2.32
NXF3Q9H4D5 RNU7-96P-201ENST00000459535 64 ntBASIC0.58□□□□□ -2.32
NXF3Q9H4D5 AC113410.1-201ENST00000505029 247 ntBASIC0.58□□□□□ -2.32
NXF3Q9H4D5 RNU6-229P-201ENST00000516614 102 ntBASIC0.58□□□□□ -2.32
NXF3Q9H4D5 AL136317.1-201ENST00000612653 226 ntBASIC0.58□□□□□ -2.32
NXF3Q9H4D5 7SK.10-201ENST00000621414 298 ntBASIC0.58□□□□□ -2.32
NXF3Q9H4D5 Z97988.1-201ENST00000637697 135 ntBASIC0.58□□□□□ -2.32
NXF3Q9H4D5 Y_RNA.308-201ENST00000365043 101 ntBASIC0.57□□□□□ -2.32
NXF3Q9H4D5 RNU6-1189P-201ENST00000383958 107 ntBASIC0.57□□□□□ -2.32
NXF3Q9H4D5 Y_RNA.440-201ENST00000384120 114 ntBASIC0.57□□□□□ -2.32
NXF3Q9H4D5 SNORD77.3-201ENST00000391113 65 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms