Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.54□□□□□ -2
ZKSCAN3Q9BRR0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZKSCAN3Q9BRR0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 Y_RNA.360-201ENST00000365512 102 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 SNORA70B-201ENST00000384210 135 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 Y_RNA.466-201ENST00000384294 113 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 RNA5SP100-201ENST00000410903 110 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 RNA5SP59-201ENST00000410922 110 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 RNA5SP450-201ENST00000411206 102 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 RPS3AP1-201ENST00000413190 320 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 RNA5SP200-201ENST00000516360 103 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 RNA5SP402-201ENST00000517148 110 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 MIR4529-201ENST00000578110 78 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 MIR5194-201ENST00000582634 120 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 MIR548AE2-201ENST00000583456 67 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 FAM106DP-201ENST00000586416 501 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 AL442128.1-201ENST00000615151 90 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.53□□□□□ -2.01
ZKSCAN3Q9BRR0 Y_RNA.470-201ENST00000384307 117 ntBASIC2.52□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-913P-201ENST00000390913 95 ntBASIC2.52□□□□□ -2.01
ZKSCAN3Q9BRR0 RPL23AP6-201ENST00000446637 472 ntBASIC2.52□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA74.3-201ENST00000517108 154 ntBASIC2.52□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-844P-201ENST00000517175 102 ntBASIC2.52□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-832P-201ENST00000363319 107 ntBASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 MIR577-201ENST00000385196 96 ntBASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA26.2-201ENST00000390922 122 ntBASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-360P-201ENST00000390944 104 ntBASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-1190P-201ENST00000410811 104 ntBASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 snoU13.16-201ENST00000459350 104 ntBASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA31.25-201ENST00000517242 134 ntBASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-1123P-201ENST00000362347 106 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-457P-201ENST00000363999 107 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA67.1-201ENST00000364749 141 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 Y_RNA.342-201ENST00000365352 113 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU7-43P-201ENST00000516554 64 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA31.17-201ENST00000516953 127 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 AC024614.2-201ENST00000577584 372 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 MIR6132-201ENST00000622083 109 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA3A-201ENST00000364113 130 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU1-52P-201ENST00000384190 164 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-616P-201ENST00000384353 107 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 RNY1P7-201ENST00000384743 110 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 RNY4P29-201ENST00000410801 97 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 AC104435.1-201ENST00000483483 166 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-762P-201ENST00000517107 102 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 MIR4648-201ENST00000580107 72 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 MIR5002-201ENST00000584713 97 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 AP000648.3-201ENST00000623539 4507 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA1.1-201ENST00000364671 133 ntBASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 MIR605-201ENST00000385078 83 ntBASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA7.5-201ENST00000410672 110 ntBASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA31.11-201ENST00000516528 139 ntBASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-1018P-201ENST00000516577 106 ntBASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 AC005336.3-201ENST00000623833 2679 ntBASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 MIRLET7G-201ENST00000362280 84 ntBASIC2.47□□□□□ -2.01
ZKSCAN3Q9BRR0 Y_RNA.377-201ENST00000365644 108 ntBASIC2.47□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-679P-201ENST00000391003 106 ntBASIC2.47□□□□□ -2.01
ZKSCAN3Q9BRR0 AC096949.1-201ENST00000412047 152 ntBASIC2.47□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU7-193P-201ENST00000516723 65 ntBASIC2.47□□□□□ -2.01
ZKSCAN3Q9BRR0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.47□□□□□ -2.01
ZKSCAN3Q9BRR0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
ZKSCAN3Q9BRR0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
ZKSCAN3Q9BRR0 AC004941.2-201ENST00000427009 228 ntBASIC2.46□□□□□ -2.02
ZKSCAN3Q9BRR0 AL353813.1-201ENST00000440700 253 ntBASIC2.46□□□□□ -2.02
ZKSCAN3Q9BRR0 MIR1270-201ENST00000459320 83 ntBASIC2.46□□□□□ -2.02
ZKSCAN3Q9BRR0 MIR4298-201ENST00000584380 73 ntBASIC2.46□□□□□ -2.02
ZKSCAN3Q9BRR0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.46□□□□□ -2.02
ZKSCAN3Q9BRR0 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.46□□□□□ -2.02
ZKSCAN3Q9BRR0 AC008133.2-201ENST00000624540 351 ntBASIC2.46□□□□□ -2.02
ZKSCAN3Q9BRR0 SNORD45B-201ENST00000364617 72 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 Y_RNA.354-201ENST00000365448 111 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 SNORA32-201ENST00000384072 121 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 SNORA18-201ENST00000384416 132 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 MIR524-201ENST00000385242 87 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 SNORA48.3-201ENST00000391081 134 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 MIR1261-201ENST00000408659 82 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 HMGN1P33-201ENST00000432945 451 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 AC011753.1-201ENST00000451001 220 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 RNA5SP57-201ENST00000459463 123 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 RNU6-521P-201ENST00000516663 105 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 MIR8055-201ENST00000610739 97 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.44□□□□□ -2.02
ZKSCAN3Q9BRR0 RNU6-170P-201ENST00000362832 104 ntBASIC2.44□□□□□ -2.02
ZKSCAN3Q9BRR0 Y_RNA.96-201ENST00000363092 109 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms