Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.54□□□□□ -2
ZKSCAN3Q9BRR0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZKSCAN3Q9BRR0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 Y_RNA.360-201ENST00000365512 102 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 SNORA70B-201ENST00000384210 135 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 Y_RNA.466-201ENST00000384294 113 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 RNA5SP100-201ENST00000410903 110 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 RNA5SP59-201ENST00000410922 110 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 RNA5SP450-201ENST00000411206 102 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 RPS3AP1-201ENST00000413190 320 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 RNA5SP200-201ENST00000516360 103 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 RNA5SP402-201ENST00000517148 110 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 MIR4529-201ENST00000578110 78 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 MIR5194-201ENST00000582634 120 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 MIR548AE2-201ENST00000583456 67 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 FAM106DP-201ENST00000586416 501 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 AL442128.1-201ENST00000615151 90 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.53□□□□□ -2
ZKSCAN3Q9BRR0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.53□□□□□ -2.01
ZKSCAN3Q9BRR0 Y_RNA.470-201ENST00000384307 117 ntBASIC2.52□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-913P-201ENST00000390913 95 ntBASIC2.52□□□□□ -2.01
ZKSCAN3Q9BRR0 RPL23AP6-201ENST00000446637 472 ntBASIC2.52□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA74.3-201ENST00000517108 154 ntBASIC2.52□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-844P-201ENST00000517175 102 ntBASIC2.52□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-832P-201ENST00000363319 107 ntBASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 MIR577-201ENST00000385196 96 ntBASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA26.2-201ENST00000390922 122 ntBASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-360P-201ENST00000390944 104 ntBASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-1190P-201ENST00000410811 104 ntBASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 snoU13.16-201ENST00000459350 104 ntBASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA31.25-201ENST00000517242 134 ntBASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.51□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-1123P-201ENST00000362347 106 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-457P-201ENST00000363999 107 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA67.1-201ENST00000364749 141 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 Y_RNA.342-201ENST00000365352 113 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU7-43P-201ENST00000516554 64 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA31.17-201ENST00000516953 127 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 AC024614.2-201ENST00000577584 372 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 MIR6132-201ENST00000622083 109 ntBASIC2.5□□□□□ -2.01
ZKSCAN3Q9BRR0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA3A-201ENST00000364113 130 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU1-52P-201ENST00000384190 164 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-616P-201ENST00000384353 107 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 RNY1P7-201ENST00000384743 110 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 RNY4P29-201ENST00000410801 97 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 AC104435.1-201ENST00000483483 166 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-762P-201ENST00000517107 102 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 MIR4648-201ENST00000580107 72 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 MIR5002-201ENST00000584713 97 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 AP000648.3-201ENST00000623539 4507 ntBASIC2.49□□□□□ -2.01
ZKSCAN3Q9BRR0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA1.1-201ENST00000364671 133 ntBASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 MIR605-201ENST00000385078 83 ntBASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA7.5-201ENST00000410672 110 ntBASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 SNORA31.11-201ENST00000516528 139 ntBASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-1018P-201ENST00000516577 106 ntBASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 AC005336.3-201ENST00000623833 2679 ntBASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ZKSCAN3Q9BRR0 MIRLET7G-201ENST00000362280 84 ntBASIC2.47□□□□□ -2.01
ZKSCAN3Q9BRR0 Y_RNA.377-201ENST00000365644 108 ntBASIC2.47□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU6-679P-201ENST00000391003 106 ntBASIC2.47□□□□□ -2.01
ZKSCAN3Q9BRR0 AC096949.1-201ENST00000412047 152 ntBASIC2.47□□□□□ -2.01
ZKSCAN3Q9BRR0 RNU7-193P-201ENST00000516723 65 ntBASIC2.47□□□□□ -2.01
ZKSCAN3Q9BRR0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.47□□□□□ -2.01
ZKSCAN3Q9BRR0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
ZKSCAN3Q9BRR0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
ZKSCAN3Q9BRR0 AC004941.2-201ENST00000427009 228 ntBASIC2.46□□□□□ -2.02
ZKSCAN3Q9BRR0 AL353813.1-201ENST00000440700 253 ntBASIC2.46□□□□□ -2.02
ZKSCAN3Q9BRR0 MIR1270-201ENST00000459320 83 ntBASIC2.46□□□□□ -2.02
ZKSCAN3Q9BRR0 MIR4298-201ENST00000584380 73 ntBASIC2.46□□□□□ -2.02
ZKSCAN3Q9BRR0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.46□□□□□ -2.02
ZKSCAN3Q9BRR0 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.46□□□□□ -2.02
ZKSCAN3Q9BRR0 AC008133.2-201ENST00000624540 351 ntBASIC2.46□□□□□ -2.02
ZKSCAN3Q9BRR0 SNORD45B-201ENST00000364617 72 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 Y_RNA.354-201ENST00000365448 111 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 SNORA32-201ENST00000384072 121 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 SNORA18-201ENST00000384416 132 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 MIR524-201ENST00000385242 87 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 SNORA48.3-201ENST00000391081 134 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 MIR1261-201ENST00000408659 82 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 HMGN1P33-201ENST00000432945 451 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 AC011753.1-201ENST00000451001 220 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 RNA5SP57-201ENST00000459463 123 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 RNU6-521P-201ENST00000516663 105 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 MIR8055-201ENST00000610739 97 ntBASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.45□□□□□ -2.02
ZKSCAN3Q9BRR0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.44□□□□□ -2.02
ZKSCAN3Q9BRR0 RNU6-170P-201ENST00000362832 104 ntBASIC2.44□□□□□ -2.02
ZKSCAN3Q9BRR0 Y_RNA.96-201ENST00000363092 109 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms