Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 RNU6-938P-201ENST00000411285 103 ntBASIC1.24□□□□□ -2.21
CLSTN3Q9BQT9 RNU2-64P-201ENST00000411315 191 ntBASIC1.24□□□□□ -2.21
CLSTN3Q9BQT9 AL591704.2-201ENST00000421658 181 ntBASIC1.24□□□□□ -2.21
CLSTN3Q9BQT9 AF228730.3-201ENST00000436691 102 ntBASIC1.24□□□□□ -2.21
CLSTN3Q9BQT9 RNU7-67P-201ENST00000459003 62 ntBASIC1.24□□□□□ -2.21
CLSTN3Q9BQT9 RPS26P48-201ENST00000491713 339 ntBASIC1.24□□□□□ -2.21
CLSTN3Q9BQT9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.24□□□□□ -2.21
CLSTN3Q9BQT9 RNU7-53P-201ENST00000516705 60 ntBASIC1.24□□□□□ -2.21
CLSTN3Q9BQT9 AL022345.2-201ENST00000606307 135 ntBASIC1.24□□□□□ -2.21
CLSTN3Q9BQT9 MIR103A2-201ENST00000362154 78 ntBASIC1.23□□□□□ -2.21
CLSTN3Q9BQT9 MIR26B-201ENST00000362251 77 ntBASIC1.23□□□□□ -2.21
CLSTN3Q9BQT9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CLSTN3Q9BQT9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.23□□□□□ -2.21
CLSTN3Q9BQT9 snoU13.16-201ENST00000459350 104 ntBASIC1.23□□□□□ -2.21
CLSTN3Q9BQT9 Y_RNA.662-201ENST00000516028 97 ntBASIC1.23□□□□□ -2.21
CLSTN3Q9BQT9 AC090821.2-201ENST00000523552 176 ntBASIC1.23□□□□□ -2.21
CLSTN3Q9BQT9 AC019288.1-201ENST00000557918 224 ntBASIC1.23□□□□□ -2.21
CLSTN3Q9BQT9 MIR151B-201ENST00000584249 96 ntBASIC1.23□□□□□ -2.21
CLSTN3Q9BQT9 AL365205.2-201ENST00000594586 68 ntBASIC1.23□□□□□ -2.21
CLSTN3Q9BQT9 MIR6788-201ENST00000618842 66 ntBASIC1.23□□□□□ -2.21
CLSTN3Q9BQT9 MIR6767-201ENST00000637302 66 ntBASIC1.23□□□□□ -2.21
CLSTN3Q9BQT9 SNORA25.7-201ENST00000364375 127 ntBASIC1.22□□□□□ -2.21
CLSTN3Q9BQT9 Y_RNA.357-201ENST00000365487 109 ntBASIC1.22□□□□□ -2.21
CLSTN3Q9BQT9 SNORA24-201ENST00000384096 131 ntBASIC1.22□□□□□ -2.21
CLSTN3Q9BQT9 Y_RNA.494-201ENST00000384432 111 ntBASIC1.22□□□□□ -2.21
CLSTN3Q9BQT9 RNU6-907P-201ENST00000390924 102 ntBASIC1.22□□□□□ -2.21
CLSTN3Q9BQT9 RNU5E-9P-201ENST00000411164 104 ntBASIC1.22□□□□□ -2.21
CLSTN3Q9BQT9 RNU7-96P-201ENST00000459535 64 ntBASIC1.22□□□□□ -2.21
CLSTN3Q9BQT9 RPS29P24-201ENST00000486345 171 ntBASIC1.22□□□□□ -2.21
CLSTN3Q9BQT9 AC074198.2-201ENST00000508153 258 ntBASIC1.22□□□□□ -2.21
CLSTN3Q9BQT9 SNORD36C-201ENST00000516733 66 ntBASIC1.22□□□□□ -2.21
CLSTN3Q9BQT9 MIR3129-201ENST00000581095 76 ntBASIC1.22□□□□□ -2.21
CLSTN3Q9BQT9 MIR3668-201ENST00000582138 75 ntBASIC1.22□□□□□ -2.21
CLSTN3Q9BQT9 Y_RNA.521-201ENST00000384560 114 ntBASIC1.21□□□□□ -2.22
CLSTN3Q9BQT9 MIR570-201ENST00000384917 97 ntBASIC1.21□□□□□ -2.22
CLSTN3Q9BQT9 MIR618-201ENST00000385287 98 ntBASIC1.21□□□□□ -2.22
CLSTN3Q9BQT9 SNORD77.3-201ENST00000391113 65 ntBASIC1.21□□□□□ -2.22
CLSTN3Q9BQT9 RNU7-80P-201ENST00000459562 61 ntBASIC1.21□□□□□ -2.22
CLSTN3Q9BQT9 RPS29P1-201ENST00000465274 159 ntBASIC1.21□□□□□ -2.22
CLSTN3Q9BQT9 AC107027.2-201ENST00000512197 115 ntBASIC1.21□□□□□ -2.22
CLSTN3Q9BQT9 SNORD79.1-201ENST00000516069 84 ntBASIC1.21□□□□□ -2.22
CLSTN3Q9BQT9 AP003716.2-201ENST00000528260 108 ntBASIC1.21□□□□□ -2.22
CLSTN3Q9BQT9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.21□□□□□ -2.22
CLSTN3Q9BQT9 MIR4295-201ENST00000585286 85 ntBASIC1.21□□□□□ -2.22
CLSTN3Q9BQT9 MIR6779-201ENST00000617283 64 ntBASIC1.21□□□□□ -2.22
CLSTN3Q9BQT9 FTX_2.1-201ENST00000618816 94 ntBASIC1.21□□□□□ -2.22
CLSTN3Q9BQT9 PVT1_3.1-201ENST00000620853 95 ntBASIC1.21□□□□□ -2.22
CLSTN3Q9BQT9 MTND1P7-201ENST00000632801 297 ntBASIC1.21□□□□□ -2.22
CLSTN3Q9BQT9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CLSTN3Q9BQT9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CLSTN3Q9BQT9 Y_RNA.337-201ENST00000365312 102 ntBASIC1.2□□□□□ -2.22
CLSTN3Q9BQT9 RNU6-396P-201ENST00000365369 105 ntBASIC1.2□□□□□ -2.22
CLSTN3Q9BQT9 Y_RNA.454-201ENST00000384224 113 ntBASIC1.2□□□□□ -2.22
CLSTN3Q9BQT9 MRPL35P3-201ENST00000421557 364 ntBASIC1.2□□□□□ -2.22
CLSTN3Q9BQT9 AL035398.1-201ENST00000430869 322 ntBASIC1.2□□□□□ -2.22
CLSTN3Q9BQT9 RNU7-73P-201ENST00000458743 63 ntBASIC1.2□□□□□ -2.22
CLSTN3Q9BQT9 snoU13.25-201ENST00000458945 104 ntBASIC1.2□□□□□ -2.22
CLSTN3Q9BQT9 RNU7-90P-201ENST00000459216 62 ntBASIC1.2□□□□□ -2.22
CLSTN3Q9BQT9 AC087343.1-201ENST00000477341 475 ntBASIC1.2□□□□□ -2.22
CLSTN3Q9BQT9 SNORA18.4-201ENST00000516440 124 ntBASIC1.2□□□□□ -2.22
CLSTN3Q9BQT9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 Y_RNA.150-201ENST00000363562 102 ntBASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 RNU4-84P-201ENST00000364200 139 ntBASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 Y_RNA.270-201ENST00000364693 104 ntBASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 RNU6-597P-201ENST00000365620 102 ntBASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 Y_RNA.441-201ENST00000384123 112 ntBASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 RNU6-239P-201ENST00000390990 99 ntBASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 RNU7-40P-201ENST00000516397 64 ntBASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 MIR2115-201ENST00000516657 100 ntBASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 RNU6-958P-201ENST00000516995 106 ntBASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 AC098479.1-201ENST00000609225 154 ntBASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 SEPT14P17-201ENST00000617978 177 ntBASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 AC027335.2-201ENST00000624030 375 ntBASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 MIR376A2-201ENST00000636782 80 ntBASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CLSTN3Q9BQT9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
CLSTN3Q9BQT9 SNORA25.3-201ENST00000363205 127 ntBASIC1.18□□□□□ -2.22
CLSTN3Q9BQT9 Y_RNA.440-201ENST00000384120 114 ntBASIC1.18□□□□□ -2.22
CLSTN3Q9BQT9 RNU6-886P-201ENST00000384319 105 ntBASIC1.18□□□□□ -2.22
CLSTN3Q9BQT9 RNU6-939P-201ENST00000384634 107 ntBASIC1.18□□□□□ -2.22
CLSTN3Q9BQT9 PCNPP3-201ENST00000393579 471 ntBASIC1.18□□□□□ -2.22
CLSTN3Q9BQT9 MIR548J-201ENST00000408833 112 ntBASIC1.18□□□□□ -2.22
CLSTN3Q9BQT9 RNA5SP261-201ENST00000410536 106 ntBASIC1.18□□□□□ -2.22
CLSTN3Q9BQT9 RNA5SP127-201ENST00000411051 133 ntBASIC1.18□□□□□ -2.22
CLSTN3Q9BQT9 AC063976.4-201ENST00000421971 163 ntBASIC1.18□□□□□ -2.22
CLSTN3Q9BQT9 RNU7-21P-201ENST00000459430 62 ntBASIC1.18□□□□□ -2.22
CLSTN3Q9BQT9 MIR5197-201ENST00000583721 112 ntBASIC1.18□□□□□ -2.22
CLSTN3Q9BQT9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CLSTN3Q9BQT9 MIR302B-201ENST00000362188 73 ntBASIC1.17□□□□□ -2.22
CLSTN3Q9BQT9 RNU6-1336P-201ENST00000383886 109 ntBASIC1.17□□□□□ -2.22
CLSTN3Q9BQT9 Y_RNA.393-201ENST00000383936 102 ntBASIC1.17□□□□□ -2.22
CLSTN3Q9BQT9 RNU6-768P-201ENST00000384683 107 ntBASIC1.17□□□□□ -2.22
CLSTN3Q9BQT9 MIR624-201ENST00000385217 97 ntBASIC1.17□□□□□ -2.22
CLSTN3Q9BQT9 RNU6-1135P-201ENST00000411083 103 ntBASIC1.17□□□□□ -2.22
CLSTN3Q9BQT9 RNU7-121P-201ENST00000516604 62 ntBASIC1.17□□□□□ -2.22
CLSTN3Q9BQT9 RNU7-70P-201ENST00000516941 66 ntBASIC1.17□□□□□ -2.22
CLSTN3Q9BQT9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms