Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 MIR598-201ENST00000384868 97 ntBASIC0.37□□□□□ -2.35
KLHDC3Q9BQ90 SNORD77.3-201ENST00000391113 65 ntBASIC0.37□□□□□ -2.35
KLHDC3Q9BQ90 RNU6-1165P-201ENST00000410119 107 ntBASIC0.37□□□□□ -2.35
KLHDC3Q9BQ90 RNU6-602P-201ENST00000411155 105 ntBASIC0.37□□□□□ -2.35
KLHDC3Q9BQ90 HMGN1P33-201ENST00000432945 451 ntBASIC0.37□□□□□ -2.35
KLHDC3Q9BQ90 AF228730.3-201ENST00000436691 102 ntBASIC0.37□□□□□ -2.35
KLHDC3Q9BQ90 RNU7-56P-201ENST00000458744 62 ntBASIC0.37□□□□□ -2.35
KLHDC3Q9BQ90 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.37□□□□□ -2.35
KLHDC3Q9BQ90 RNU6-1137P-201ENST00000517073 99 ntBASIC0.37□□□□□ -2.35
KLHDC3Q9BQ90 MIR3612-201ENST00000579753 87 ntBASIC0.37□□□□□ -2.35
KLHDC3Q9BQ90 Y_RNA.91-201ENST00000363042 107 ntBASIC0.36□□□□□ -2.35
KLHDC3Q9BQ90 Y_RNA.117-201ENST00000363294 101 ntBASIC0.36□□□□□ -2.35
KLHDC3Q9BQ90 MIR588-201ENST00000384900 83 ntBASIC0.36□□□□□ -2.35
KLHDC3Q9BQ90 MTCYBP6-201ENST00000441810 138 ntBASIC0.36□□□□□ -2.35
KLHDC3Q9BQ90 SNORD2.1-201ENST00000458762 69 ntBASIC0.36□□□□□ -2.35
KLHDC3Q9BQ90 RNU2-11P-201ENST00000459191 187 ntBASIC0.36□□□□□ -2.35
KLHDC3Q9BQ90 snoU13.2-201ENST00000459201 104 ntBASIC0.36□□□□□ -2.35
KLHDC3Q9BQ90 TRBVB-201ENST00000477100 408 ntBASIC0.36□□□□□ -2.35
KLHDC3Q9BQ90 RNU6-570P-201ENST00000517051 105 ntBASIC0.36□□□□□ -2.35
KLHDC3Q9BQ90 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.36□□□□□ -2.35
KLHDC3Q9BQ90 AL589743.1-201ENST00000551932 2712 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 Y_RNA.82-201ENST00000363000 102 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 Y_RNA.92-201ENST00000363043 102 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 Y_RNA.235-201ENST00000364412 102 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 Y_RNA.306-201ENST00000365015 102 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 Y_RNA.312-201ENST00000365089 102 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 Y_RNA.322-201ENST00000365151 102 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 Y_RNA.440-201ENST00000384120 114 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 RNU6-342P-201ENST00000384521 104 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 RNU6-713P-201ENST00000384761 107 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 MIR563-201ENST00000385080 79 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 MIR616-201ENST00000385293 97 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 MT-TF-201ENST00000387314 71 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 MIR1257-201ENST00000408490 117 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 Y_RNA.650-201ENST00000459002 102 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 Y_RNA.777-201ENST00000516982 102 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 Y_RNA.771-201ENST00000598668 102 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 U2.14-201ENST00000615943 113 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 AP001282.2-201ENST00000616149 309 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 Y_RNA.789-201ENST00000622480 102 ntBASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.35□□□□□ -2.35
KLHDC3Q9BQ90 RNU6-740P-201ENST00000364734 105 ntBASIC0.34□□□□□ -2.36
KLHDC3Q9BQ90 MIR125B2-201ENST00000385128 89 ntBASIC0.34□□□□□ -2.36
KLHDC3Q9BQ90 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.34□□□□□ -2.36
KLHDC3Q9BQ90 AL138752.1-201ENST00000452964 351 ntBASIC0.34□□□□□ -2.36
KLHDC3Q9BQ90 Y_RNA.701-201ENST00000516812 110 ntBASIC0.34□□□□□ -2.36
KLHDC3Q9BQ90 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.34□□□□□ -2.36
KLHDC3Q9BQ90 AC090897.1-201ENST00000580909 226 ntBASIC0.34□□□□□ -2.36
KLHDC3Q9BQ90 AC044792.1-201ENST00000593294 196 ntBASIC0.34□□□□□ -2.36
KLHDC3Q9BQ90 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 MIR335-201ENST00000362173 94 ntBASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 Y_RNA.7-201ENST00000362352 102 ntBASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-1309P-201ENST00000363305 108 ntBASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 Y_RNA.237-201ENST00000364439 102 ntBASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-364P-201ENST00000384387 107 ntBASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 MIR489-201ENST00000384923 84 ntBASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-1228P-201ENST00000391014 107 ntBASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-1109P-201ENST00000391187 107 ntBASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 AL606845.1-201ENST00000404881 255 ntBASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 SNORD100-201ENST00000408573 76 ntBASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 RNA5SP261-201ENST00000410536 106 ntBASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-1190P-201ENST00000410811 104 ntBASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 RNU7-185P-201ENST00000459215 60 ntBASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 AL162730.1-201ENST00000605734 292 ntBASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 PVT1_3.1-201ENST00000620853 95 ntBASIC0.33□□□□□ -2.36
KLHDC3Q9BQ90 snoU2_19.4-201ENST00000364329 80 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 MT-TT-201ENST00000387460 66 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-1319P-201ENST00000390855 104 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-747P-201ENST00000390928 104 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-241P-201ENST00000391148 104 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-447P-201ENST00000410293 104 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-1118P-201ENST00000410382 104 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-1076P-201ENST00000410397 104 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-355P-201ENST00000410427 104 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-791P-201ENST00000410467 104 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 Y_RNA.604-201ENST00000410574 102 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-705P-201ENST00000410601 104 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-1100P-201ENST00000410691 104 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-860P-201ENST00000410860 104 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 Y_RNA.622-201ENST00000411091 108 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-1217P-201ENST00000411276 104 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 RNU6-785P-201ENST00000411324 104 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 SNRPGP8-201ENST00000454064 226 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 SNORA68.3-201ENST00000515906 83 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 SNORD92-201ENST00000585078 85 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 AC243829.6-201ENST00000612652 106 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 U6.90-201ENST00000614007 104 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 U6.70-201ENST00000620287 104 ntBASIC0.32□□□□□ -2.36
KLHDC3Q9BQ90 MIR302B-201ENST00000362188 73 ntBASIC0.31□□□□□ -2.36
KLHDC3Q9BQ90 Y_RNA.199-201ENST00000364014 102 ntBASIC0.31□□□□□ -2.36
KLHDC3Q9BQ90 Y_RNA.304-201ENST00000365011 112 ntBASIC0.31□□□□□ -2.36
KLHDC3Q9BQ90 Y_RNA.542-201ENST00000384641 111 ntBASIC0.31□□□□□ -2.36
KLHDC3Q9BQ90 Y_RNA.590-201ENST00000410140 107 ntBASIC0.31□□□□□ -2.36
KLHDC3Q9BQ90 RNU7-102P-201ENST00000458948 62 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 195 ms