Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 DNAJC19P9-201ENST00000555084 351 ntBASIC1.58□□□□□ -2.16
VRK1Q99986 MIR8055-201ENST00000610739 97 ntBASIC1.58□□□□□ -2.16
VRK1Q99986 AC084768.2-201ENST00000622736 221 ntBASIC1.58□□□□□ -2.16
VRK1Q99986 SNORA16.1-201ENST00000364597 132 ntBASIC1.57□□□□□ -2.16
VRK1Q99986 Y_RNA.280-201ENST00000364765 112 ntBASIC1.57□□□□□ -2.16
VRK1Q99986 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
VRK1Q99986 RNU6-913P-201ENST00000390913 95 ntBASIC1.57□□□□□ -2.16
VRK1Q99986 RNA5SP261-201ENST00000410536 106 ntBASIC1.57□□□□□ -2.16
VRK1Q99986 AL020996.3-201ENST00000606617 222 ntBASIC1.57□□□□□ -2.16
VRK1Q99986 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.57□□□□□ -2.16
VRK1Q99986 RNU1-17P-201ENST00000363022 152 ntBASIC1.56□□□□□ -2.16
VRK1Q99986 RNU6-508P-201ENST00000363231 103 ntBASIC1.56□□□□□ -2.16
VRK1Q99986 RNU6-1319P-201ENST00000390855 104 ntBASIC1.56□□□□□ -2.16
VRK1Q99986 RNU6-747P-201ENST00000390928 104 ntBASIC1.56□□□□□ -2.16
VRK1Q99986 RNU6-241P-201ENST00000391148 104 ntBASIC1.56□□□□□ -2.16
VRK1Q99986 RNU6-177P-201ENST00000411257 104 ntBASIC1.56□□□□□ -2.16
VRK1Q99986 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.56□□□□□ -2.16
VRK1Q99986 AC009474.2-201ENST00000451383 136 ntBASIC1.56□□□□□ -2.16
VRK1Q99986 snoU13.25-201ENST00000458945 104 ntBASIC1.56□□□□□ -2.16
VRK1Q99986 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.56□□□□□ -2.16
VRK1Q99986 RN7SKP88-201ENST00000516847 250 ntBASIC1.56□□□□□ -2.16
VRK1Q99986 AP003716.2-201ENST00000528260 108 ntBASIC1.56□□□□□ -2.16
VRK1Q99986 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.56□□□□□ -2.16
VRK1Q99986 MIR8081-201ENST00000611533 95 ntBASIC1.56□□□□□ -2.16
VRK1Q99986 7SK.8-201ENST00000612110 250 ntBASIC1.56□□□□□ -2.16
VRK1Q99986 7SK.11-201ENST00000615477 250 ntBASIC1.56□□□□□ -2.16
VRK1Q99986 7SK.13-201ENST00000622040 250 ntBASIC1.56□□□□□ -2.16
VRK1Q99986 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.56□□□□□ -2.16
VRK1Q99986 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
VRK1Q99986 RNA5SP458-201ENST00000516188 119 ntBASIC1.55□□□□□ -2.16
VRK1Q99986 MIR3152-201ENST00000579801 74 ntBASIC1.55□□□□□ -2.16
VRK1Q99986 MIR548AO-201ENST00000579992 96 ntBASIC1.55□□□□□ -2.16
VRK1Q99986 Y_RNA.114-201ENST00000363265 113 ntBASIC1.54□□□□□ -2.16
VRK1Q99986 RNA5SP363-201ENST00000365072 115 ntBASIC1.54□□□□□ -2.16
VRK1Q99986 Y_RNA.430-201ENST00000384081 110 ntBASIC1.54□□□□□ -2.16
VRK1Q99986 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.54□□□□□ -2.16
VRK1Q99986 SNORA26.6-201ENST00000391256 115 ntBASIC1.54□□□□□ -2.16
VRK1Q99986 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.54□□□□□ -2.16
VRK1Q99986 RNU6-406P-201ENST00000516470 107 ntBASIC1.54□□□□□ -2.16
VRK1Q99986 RNU11-2P-201ENST00000516898 142 ntBASIC1.54□□□□□ -2.16
VRK1Q99986 CYP3A52P-201ENST00000563326 91 ntBASIC1.54□□□□□ -2.16
VRK1Q99986 MIR4419B-201ENST00000577260 68 ntBASIC1.54□□□□□ -2.16
VRK1Q99986 AC021613.1-201ENST00000623880 111 ntBASIC1.54□□□□□ -2.16
VRK1Q99986 Z97988.1-201ENST00000637697 135 ntBASIC1.54□□□□□ -2.16
VRK1Q99986 AC132825.6-201ENST00000638861 357 ntBASIC1.54□□□□□ -2.16
VRK1Q99986 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
VRK1Q99986 RNU6-647P-201ENST00000364243 107 ntBASIC1.53□□□□□ -2.16
VRK1Q99986 MIR1302-7-201ENST00000408841 72 ntBASIC1.53□□□□□ -2.16
VRK1Q99986 AC245047.7-201ENST00000440265 293 ntBASIC1.53□□□□□ -2.16
VRK1Q99986 AL158147.1-201ENST00000443970 75 ntBASIC1.53□□□□□ -2.16
VRK1Q99986 RNU6-893P-201ENST00000458841 100 ntBASIC1.53□□□□□ -2.16
VRK1Q99986 PRELID3BP2-201ENST00000605362 201 ntBASIC1.53□□□□□ -2.16
VRK1Q99986 MIR6717-201ENST00000622747 73 ntBASIC1.53□□□□□ -2.16
VRK1Q99986 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
VRK1Q99986 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.17
VRK1Q99986 RNA5SP264-201ENST00000363115 107 ntBASIC1.52□□□□□ -2.17
VRK1Q99986 SNORD48-201ENST00000364953 64 ntBASIC1.52□□□□□ -2.17
VRK1Q99986 RNA5SP190-201ENST00000365222 118 ntBASIC1.52□□□□□ -2.17
VRK1Q99986 RNU6-690P-201ENST00000365242 106 ntBASIC1.52□□□□□ -2.17
VRK1Q99986 RNU6-959P-201ENST00000384671 107 ntBASIC1.52□□□□□ -2.17
VRK1Q99986 MIR9-3-201ENST00000385084 90 ntBASIC1.52□□□□□ -2.17
VRK1Q99986 RNU6-970P-201ENST00000516312 107 ntBASIC1.52□□□□□ -2.17
VRK1Q99986 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.52□□□□□ -2.17
VRK1Q99986 MIR3683-201ENST00000580847 82 ntBASIC1.52□□□□□ -2.17
VRK1Q99986 AP000942.3-201ENST00000603702 160 ntBASIC1.52□□□□□ -2.17
VRK1Q99986 SNORA1.1-201ENST00000364671 133 ntBASIC1.51□□□□□ -2.17
VRK1Q99986 SNORD113-1-201ENST00000365321 69 ntBASIC1.51□□□□□ -2.17
VRK1Q99986 RNU6-1211P-201ENST00000459179 105 ntBASIC1.51□□□□□ -2.17
VRK1Q99986 RNU5E-3P-201ENST00000515913 68 ntBASIC1.51□□□□□ -2.17
VRK1Q99986 RNU6-971P-201ENST00000516920 106 ntBASIC1.51□□□□□ -2.17
VRK1Q99986 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
VRK1Q99986 MIR8065-201ENST00000620577 100 ntBASIC1.51□□□□□ -2.17
VRK1Q99986 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VRK1Q99986 SNORA25.3-201ENST00000363205 127 ntBASIC1.5□□□□□ -2.17
VRK1Q99986 Y_RNA.294-201ENST00000364916 102 ntBASIC1.5□□□□□ -2.17
VRK1Q99986 RNU6-80P-201ENST00000384195 107 ntBASIC1.5□□□□□ -2.17
VRK1Q99986 Y_RNA.617-201ENST00000410920 90 ntBASIC1.5□□□□□ -2.17
VRK1Q99986 RPS3AP1-201ENST00000413190 320 ntBASIC1.5□□□□□ -2.17
VRK1Q99986 SNORD13-201ENST00000459299 104 ntBASIC1.5□□□□□ -2.17
VRK1Q99986 RNU7-45P-201ENST00000459460 63 ntBASIC1.5□□□□□ -2.17
VRK1Q99986 RPS29P11-201ENST00000496507 171 ntBASIC1.5□□□□□ -2.17
VRK1Q99986 RNU6-240P-201ENST00000516098 97 ntBASIC1.5□□□□□ -2.17
VRK1Q99986 AC133485.4-201ENST00000561835 220 ntBASIC1.5□□□□□ -2.17
VRK1Q99986 AC138907.4-201ENST00000570107 226 ntBASIC1.5□□□□□ -2.17
VRK1Q99986 HSPE1P19-201ENST00000603327 295 ntBASIC1.5□□□□□ -2.17
VRK1Q99986 MIR6841-201ENST00000637129 72 ntBASIC1.5□□□□□ -2.17
VRK1Q99986 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VRK1Q99986 RNU6-396P-201ENST00000365369 105 ntBASIC1.49□□□□□ -2.17
VRK1Q99986 Y_RNA.354-201ENST00000365448 111 ntBASIC1.49□□□□□ -2.17
VRK1Q99986 MIR1185-1-201ENST00000408598 86 ntBASIC1.49□□□□□ -2.17
VRK1Q99986 RNU6-1190P-201ENST00000410811 104 ntBASIC1.49□□□□□ -2.17
VRK1Q99986 HMGN1P33-201ENST00000432945 451 ntBASIC1.49□□□□□ -2.17
VRK1Q99986 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.49□□□□□ -2.17
VRK1Q99986 AC048334.1-201ENST00000477975 159 ntBASIC1.49□□□□□ -2.17
VRK1Q99986 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.49□□□□□ -2.17
VRK1Q99986 AC108081.1-201ENST00000604358 221 ntBASIC1.49□□□□□ -2.17
VRK1Q99986 AL137067.1-201ENST00000615933 120 ntBASIC1.49□□□□□ -2.17
VRK1Q99986 MIR103A2-201ENST00000362154 78 ntBASIC1.48□□□□□ -2.17
VRK1Q99986 Y_RNA.366-201ENST00000365540 102 ntBASIC1.48□□□□□ -2.17
VRK1Q99986 RNA5SP144-201ENST00000410846 116 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms