Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 RNU6-389P-201ENST00000517048 105 ntBASIC1.2□□□□□ -2.22
EYA3Q99504 AC078938.1-201ENST00000620993 318 ntBASIC1.2□□□□□ -2.22
EYA3Q99504 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.2□□□□□ -2.22
EYA3Q99504 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
EYA3Q99504 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
EYA3Q99504 Y_RNA.274-201ENST00000364714 101 ntBASIC1.19□□□□□ -2.22
EYA3Q99504 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.19□□□□□ -2.22
EYA3Q99504 AC063976.4-201ENST00000421971 163 ntBASIC1.19□□□□□ -2.22
EYA3Q99504 AL392103.1-201ENST00000447000 198 ntBASIC1.19□□□□□ -2.22
EYA3Q99504 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
EYA3Q99504 SNORA18.4-201ENST00000516440 124 ntBASIC1.19□□□□□ -2.22
EYA3Q99504 MIR5000-201ENST00000577717 103 ntBASIC1.19□□□□□ -2.22
EYA3Q99504 AL365205.2-201ENST00000594586 68 ntBASIC1.19□□□□□ -2.22
EYA3Q99504 MTND1P7-201ENST00000632801 297 ntBASIC1.19□□□□□ -2.22
EYA3Q99504 RNU1-124P-201ENST00000363861 145 ntBASIC1.18□□□□□ -2.22
EYA3Q99504 RNU6-47P-201ENST00000383866 107 ntBASIC1.18□□□□□ -2.22
EYA3Q99504 RNU6-1189P-201ENST00000383958 107 ntBASIC1.18□□□□□ -2.22
EYA3Q99504 Y_RNA.412-201ENST00000384001 104 ntBASIC1.18□□□□□ -2.22
EYA3Q99504 RNU6-643P-201ENST00000384018 107 ntBASIC1.18□□□□□ -2.22
EYA3Q99504 SNORA27-201ENST00000384323 126 ntBASIC1.18□□□□□ -2.22
EYA3Q99504 Y_RNA.494-201ENST00000384432 111 ntBASIC1.18□□□□□ -2.22
EYA3Q99504 MIR19B1-201ENST00000384829 87 ntBASIC1.18□□□□□ -2.22
EYA3Q99504 MIR1302-7-201ENST00000408841 72 ntBASIC1.18□□□□□ -2.22
EYA3Q99504 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.18□□□□□ -2.22
EYA3Q99504 SNORD116-25-201ENST00000516517 92 ntBASIC1.18□□□□□ -2.22
EYA3Q99504 MRPS18CP4-201ENST00000535821 231 ntBASIC1.18□□□□□ -2.22
EYA3Q99504 MIR378D2-201ENST00000580636 98 ntBASIC1.18□□□□□ -2.22
EYA3Q99504 SEPT14P17-201ENST00000617978 177 ntBASIC1.18□□□□□ -2.22
EYA3Q99504 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.17□□□□□ -2.22
EYA3Q99504 Y_RNA.297-201ENST00000364950 91 ntBASIC1.17□□□□□ -2.22
EYA3Q99504 RNU6-1292P-201ENST00000383856 107 ntBASIC1.17□□□□□ -2.22
EYA3Q99504 SNORA1-201ENST00000384107 130 ntBASIC1.17□□□□□ -2.22
EYA3Q99504 RPS29P28-201ENST00000446439 141 ntBASIC1.17□□□□□ -2.22
EYA3Q99504 RNU7-90P-201ENST00000459216 62 ntBASIC1.17□□□□□ -2.22
EYA3Q99504 snoU13.16-201ENST00000459350 104 ntBASIC1.17□□□□□ -2.22
EYA3Q99504 RPS29P24-201ENST00000486345 171 ntBASIC1.17□□□□□ -2.22
EYA3Q99504 CYP3A137P-201ENST00000562436 69 ntBASIC1.17□□□□□ -2.22
EYA3Q99504 MIR3973-201ENST00000579824 107 ntBASIC1.17□□□□□ -2.22
EYA3Q99504 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.17□□□□□ -2.22
EYA3Q99504 U6.106-201ENST00000636360 105 ntBASIC1.17□□□□□ -2.22
EYA3Q99504 RNU6-978P-201ENST00000364371 103 ntBASIC1.16□□□□□ -2.22
EYA3Q99504 RNU6-200P-201ENST00000364743 107 ntBASIC1.16□□□□□ -2.22
EYA3Q99504 SNORD77.3-201ENST00000391113 65 ntBASIC1.16□□□□□ -2.22
EYA3Q99504 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.16□□□□□ -2.22
EYA3Q99504 AC002429.1-201ENST00000437672 148 ntBASIC1.16□□□□□ -2.22
EYA3Q99504 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.16□□□□□ -2.22
EYA3Q99504 RNU7-67P-201ENST00000459003 62 ntBASIC1.16□□□□□ -2.22
EYA3Q99504 Y_RNA.644-201ENST00000459006 113 ntBASIC1.16□□□□□ -2.22
EYA3Q99504 RNU7-96P-201ENST00000459535 64 ntBASIC1.16□□□□□ -2.22
EYA3Q99504 Y_RNA.674-201ENST00000516362 113 ntBASIC1.16□□□□□ -2.22
EYA3Q99504 RNU7-53P-201ENST00000516705 60 ntBASIC1.16□□□□□ -2.22
EYA3Q99504 MIR548AO-201ENST00000579992 96 ntBASIC1.16□□□□□ -2.22
EYA3Q99504 MIR3129-201ENST00000581095 76 ntBASIC1.16□□□□□ -2.22
EYA3Q99504 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.16□□□□□ -2.22
EYA3Q99504 Y_RNA.36-201ENST00000362602 112 ntBASIC1.15□□□□□ -2.23
EYA3Q99504 Y_RNA.233-201ENST00000364407 101 ntBASIC1.15□□□□□ -2.23
EYA3Q99504 Y_RNA.440-201ENST00000384120 114 ntBASIC1.15□□□□□ -2.23
EYA3Q99504 AL138752.1-201ENST00000452964 351 ntBASIC1.15□□□□□ -2.23
EYA3Q99504 RNU7-73P-201ENST00000458743 63 ntBASIC1.15□□□□□ -2.23
EYA3Q99504 MIR2115-201ENST00000516657 100 ntBASIC1.15□□□□□ -2.23
EYA3Q99504 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.15□□□□□ -2.23
EYA3Q99504 AC008163.1-202ENST00000636004 2889 ntBASIC1.15□□□□□ -2.23
EYA3Q99504 Y_RNA.257-201ENST00000364596 102 ntBASIC1.14□□□□□ -2.23
EYA3Q99504 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
EYA3Q99504 MRPL35P3-201ENST00000421557 364 ntBASIC1.14□□□□□ -2.23
EYA3Q99504 Y_RNA.700-201ENST00000516806 100 ntBASIC1.14□□□□□ -2.23
EYA3Q99504 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.14□□□□□ -2.23
EYA3Q99504 MIR4431-201ENST00000579990 94 ntBASIC1.14□□□□□ -2.23
EYA3Q99504 MIR5197-201ENST00000583721 112 ntBASIC1.14□□□□□ -2.23
EYA3Q99504 AC072026.1-201ENST00000605023 201 ntBASIC1.14□□□□□ -2.23
EYA3Q99504 AC012676.2-201ENST00000619258 186 ntBASIC1.14□□□□□ -2.23
EYA3Q99504 RNU6-312P-201ENST00000364629 107 ntBASIC1.13□□□□□ -2.23
EYA3Q99504 Y_RNA.330-201ENST00000365230 109 ntBASIC1.13□□□□□ -2.23
EYA3Q99504 RNU6-396P-201ENST00000365369 105 ntBASIC1.13□□□□□ -2.23
EYA3Q99504 Y_RNA.793-201ENST00000411222 111 ntBASIC1.13□□□□□ -2.23
EYA3Q99504 AL035398.1-201ENST00000430869 322 ntBASIC1.13□□□□□ -2.23
EYA3Q99504 RNU6-998P-201ENST00000515894 101 ntBASIC1.13□□□□□ -2.23
EYA3Q99504 RNU6-138P-201ENST00000515952 107 ntBASIC1.13□□□□□ -2.23
EYA3Q99504 RNA5SP436-201ENST00000516020 115 ntBASIC1.13□□□□□ -2.23
EYA3Q99504 RNU6-958P-201ENST00000516995 106 ntBASIC1.13□□□□□ -2.23
EYA3Q99504 HSPE1P19-201ENST00000603327 295 ntBASIC1.13□□□□□ -2.23
EYA3Q99504 MIR6516-201ENST00000630554 81 ntBASIC1.13□□□□□ -2.23
EYA3Q99504 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
EYA3Q99504 RNU6-613P-201ENST00000410412 108 ntBASIC1.12□□□□□ -2.23
EYA3Q99504 AC006461.1-201ENST00000412637 326 ntBASIC1.12□□□□□ -2.23
EYA3Q99504 RNU6-1219P-201ENST00000516143 112 ntBASIC1.12□□□□□ -2.23
EYA3Q99504 MIR6779-201ENST00000617283 64 ntBASIC1.12□□□□□ -2.23
EYA3Q99504 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.12□□□□□ -2.23
EYA3Q99504 MIR376A2-201ENST00000636782 80 ntBASIC1.12□□□□□ -2.23
EYA3Q99504 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
EYA3Q99504 MT-TN-201ENST00000387400 73 ntBASIC1.11□□□□□ -2.23
EYA3Q99504 UBL5P1-201ENST00000507979 193 ntBASIC1.11□□□□□ -2.23
EYA3Q99504 AP002392.1-201ENST00000537692 208 ntBASIC1.11□□□□□ -2.23
EYA3Q99504 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
EYA3Q99504 SNORA25.7-201ENST00000364375 127 ntBASIC1.1□□□□□ -2.23
EYA3Q99504 RNU1-133P-201ENST00000364867 167 ntBASIC1.1□□□□□ -2.23
EYA3Q99504 RNU6-597P-201ENST00000365620 102 ntBASIC1.1□□□□□ -2.23
EYA3Q99504 MIR200A-201ENST00000384875 90 ntBASIC1.1□□□□□ -2.23
EYA3Q99504 MIR624-201ENST00000385217 97 ntBASIC1.1□□□□□ -2.23
EYA3Q99504 RNA5SP127-201ENST00000411051 133 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms