Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 Y_RNA.7-201ENST00000362352 102 ntBASIC0.61□□□□□ -2.31
RAB40CQ96S21 Y_RNA.23-201ENST00000362496 106 ntBASIC0.61□□□□□ -2.31
RAB40CQ96S21 RNU6-369P-201ENST00000362515 102 ntBASIC0.61□□□□□ -2.31
RAB40CQ96S21 Y_RNA.288-201ENST00000364854 92 ntBASIC0.61□□□□□ -2.31
RAB40CQ96S21 Y_RNA.440-201ENST00000384120 114 ntBASIC0.61□□□□□ -2.31
RAB40CQ96S21 RNU1-119P-201ENST00000391122 165 ntBASIC0.61□□□□□ -2.31
RAB40CQ96S21 SNORA79-201ENST00000408376 140 ntBASIC0.61□□□□□ -2.31
RAB40CQ96S21 MIR548I3-201ENST00000408378 149 ntBASIC0.61□□□□□ -2.31
RAB40CQ96S21 MIR548H3-201ENST00000408771 118 ntBASIC0.61□□□□□ -2.31
RAB40CQ96S21 AL358176.2-201ENST00000425769 204 ntBASIC0.61□□□□□ -2.31
RAB40CQ96S21 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.61□□□□□ -2.31
RAB40CQ96S21 MIR4771-2-201ENST00000577758 74 ntBASIC0.61□□□□□ -2.31
RAB40CQ96S21 MIR4771-1-201ENST00000582617 74 ntBASIC0.61□□□□□ -2.31
RAB40CQ96S21 MIR342-201ENST00000362212 99 ntBASIC0.6□□□□□ -2.31
RAB40CQ96S21 Y_RNA.76-201ENST00000362931 109 ntBASIC0.6□□□□□ -2.31
RAB40CQ96S21 RNU1-93P-201ENST00000364704 169 ntBASIC0.6□□□□□ -2.31
RAB40CQ96S21 SNORA1-201ENST00000384107 130 ntBASIC0.6□□□□□ -2.31
RAB40CQ96S21 SNORD77.3-201ENST00000391113 65 ntBASIC0.6□□□□□ -2.31
RAB40CQ96S21 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.6□□□□□ -2.31
RAB40CQ96S21 AC244098.3-201ENST00000424803 96 ntBASIC0.6□□□□□ -2.31
RAB40CQ96S21 AC015818.7-201ENST00000428754 109 ntBASIC0.6□□□□□ -2.31
RAB40CQ96S21 MTND5P15-201ENST00000434246 349 ntBASIC0.6□□□□□ -2.31
RAB40CQ96S21 AC087499.7-201ENST00000441958 109 ntBASIC0.6□□□□□ -2.31
RAB40CQ96S21 SNORD127-201ENST00000458892 86 ntBASIC0.6□□□□□ -2.31
RAB40CQ96S21 snoU13.18-201ENST00000459483 104 ntBASIC0.6□□□□□ -2.31
RAB40CQ96S21 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.6□□□□□ -2.31
RAB40CQ96S21 RNU6-561P-201ENST00000516222 102 ntBASIC0.6□□□□□ -2.31
RAB40CQ96S21 RNU6-977P-201ENST00000516411 103 ntBASIC0.6□□□□□ -2.31
RAB40CQ96S21 MIR373-201ENST00000362273 69 ntBASIC0.59□□□□□ -2.31
RAB40CQ96S21 RNU6-103P-201ENST00000363686 107 ntBASIC0.59□□□□□ -2.31
RAB40CQ96S21 Y_RNA.292-201ENST00000364904 97 ntBASIC0.59□□□□□ -2.31
RAB40CQ96S21 MIR520F-201ENST00000384824 87 ntBASIC0.59□□□□□ -2.31
RAB40CQ96S21 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
RAB40CQ96S21 RNU6-602P-201ENST00000411155 105 ntBASIC0.59□□□□□ -2.31
RAB40CQ96S21 Y_RNA.673-201ENST00000516306 88 ntBASIC0.59□□□□□ -2.31
RAB40CQ96S21 MIR151B-201ENST00000584249 96 ntBASIC0.59□□□□□ -2.31
RAB40CQ96S21 AC011921.3-201ENST00000605540 361 ntBASIC0.59□□□□□ -2.31
RAB40CQ96S21 RMST_2.1-201ENST00000617263 136 ntBASIC0.59□□□□□ -2.31
RAB40CQ96S21 MIR6740-201ENST00000618268 113 ntBASIC0.59□□□□□ -2.31
RAB40CQ96S21 MIR6767-201ENST00000637302 66 ntBASIC0.59□□□□□ -2.31
RAB40CQ96S21 Y_RNA.508-201ENST00000384502 114 ntBASIC0.58□□□□□ -2.32
RAB40CQ96S21 Y_RNA.542-201ENST00000384641 111 ntBASIC0.58□□□□□ -2.32
RAB40CQ96S21 MIR520E-201ENST00000384867 87 ntBASIC0.58□□□□□ -2.32
RAB40CQ96S21 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.58□□□□□ -2.32
RAB40CQ96S21 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.58□□□□□ -2.32
RAB40CQ96S21 RNU6-1190P-201ENST00000410811 104 ntBASIC0.58□□□□□ -2.32
RAB40CQ96S21 RPS29P1-201ENST00000465274 159 ntBASIC0.58□□□□□ -2.32
RAB40CQ96S21 RNU6-327P-201ENST00000516270 127 ntBASIC0.58□□□□□ -2.32
RAB40CQ96S21 MIR3129-201ENST00000581095 76 ntBASIC0.58□□□□□ -2.32
RAB40CQ96S21 uc_338.6-201ENST00000613544 171 ntBASIC0.58□□□□□ -2.32
RAB40CQ96S21 MIR6788-201ENST00000618842 66 ntBASIC0.58□□□□□ -2.32
RAB40CQ96S21 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.58□□□□□ -2.32
RAB40CQ96S21 AC010332.2-201ENST00000613083 1904 ntBASIC0.58□□□□□ -2.32
RAB40CQ96S21 MIR302B-201ENST00000362188 73 ntBASIC0.57□□□□□ -2.32
RAB40CQ96S21 MIR588-201ENST00000384900 83 ntBASIC0.57□□□□□ -2.32
RAB40CQ96S21 MIR520H-201ENST00000385126 88 ntBASIC0.57□□□□□ -2.32
RAB40CQ96S21 MIR1302-3-201ENST00000408128 138 ntBASIC0.57□□□□□ -2.32
RAB40CQ96S21 RNA5SP222-201ENST00000411039 105 ntBASIC0.57□□□□□ -2.32
RAB40CQ96S21 MTCYBP9-201ENST00000431021 303 ntBASIC0.57□□□□□ -2.32
RAB40CQ96S21 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
RAB40CQ96S21 RNU6-1223P-201ENST00000517124 104 ntBASIC0.57□□□□□ -2.32
RAB40CQ96S21 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.57□□□□□ -2.32
RAB40CQ96S21 AC108706.1-201ENST00000611053 297 ntBASIC0.57□□□□□ -2.32
RAB40CQ96S21 MIR376A2-201ENST00000636782 80 ntBASIC0.57□□□□□ -2.32
RAB40CQ96S21 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
RAB40CQ96S21 SNORD27-201ENST00000363981 72 ntBASIC0.56□□□□□ -2.32
RAB40CQ96S21 Y_RNA.351-201ENST00000365436 96 ntBASIC0.56□□□□□ -2.32
RAB40CQ96S21 Y_RNA.556-201ENST00000384677 113 ntBASIC0.56□□□□□ -2.32
RAB40CQ96S21 Y_RNA.562-201ENST00000384695 113 ntBASIC0.56□□□□□ -2.32
RAB40CQ96S21 RNU4-43P-201ENST00000410628 137 ntBASIC0.56□□□□□ -2.32
RAB40CQ96S21 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.56□□□□□ -2.32
RAB40CQ96S21 AL121914.1-201ENST00000450188 156 ntBASIC0.56□□□□□ -2.32
RAB40CQ96S21 RNU6-1132P-201ENST00000459214 107 ntBASIC0.56□□□□□ -2.32
RAB40CQ96S21 AC004817.2-201ENST00000561794 651 ntBASIC0.56□□□□□ -2.32
RAB40CQ96S21 MIR4744-201ENST00000581563 82 ntBASIC0.56□□□□□ -2.32
RAB40CQ96S21 MIR4676-201ENST00000583078 72 ntBASIC0.56□□□□□ -2.32
RAB40CQ96S21 MIR5197-201ENST00000583721 112 ntBASIC0.56□□□□□ -2.32
RAB40CQ96S21 Y_RNA.308-201ENST00000365043 101 ntBASIC0.55□□□□□ -2.32
RAB40CQ96S21 SNORA36.2-201ENST00000384004 127 ntBASIC0.55□□□□□ -2.32
RAB40CQ96S21 MIR573-201ENST00000384964 99 ntBASIC0.55□□□□□ -2.32
RAB40CQ96S21 RNU6-1165P-201ENST00000410119 107 ntBASIC0.55□□□□□ -2.32
RAB40CQ96S21 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.55□□□□□ -2.32
RAB40CQ96S21 MTND2P23-201ENST00000422990 651 ntBASIC0.55□□□□□ -2.32
RAB40CQ96S21 AC004941.2-201ENST00000427009 228 ntBASIC0.55□□□□□ -2.32
RAB40CQ96S21 MIR18B-201ENST00000454574 71 ntBASIC0.55□□□□□ -2.32
RAB40CQ96S21 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.55□□□□□ -2.32
RAB40CQ96S21 snoU13.2-201ENST00000459201 104 ntBASIC0.55□□□□□ -2.32
RAB40CQ96S21 RNU7-80P-201ENST00000459562 61 ntBASIC0.55□□□□□ -2.32
RAB40CQ96S21 RNY3P16-201ENST00000516338 101 ntBASIC0.55□□□□□ -2.32
RAB40CQ96S21 AC018659.1-201ENST00000551083 169 ntBASIC0.55□□□□□ -2.32
RAB40CQ96S21 MIR4804-201ENST00000581683 73 ntBASIC0.55□□□□□ -2.32
RAB40CQ96S21 SNORA4-201ENST00000584302 138 ntBASIC0.55□□□□□ -2.32
RAB40CQ96S21 AL365205.2-201ENST00000594586 68 ntBASIC0.55□□□□□ -2.32
RAB40CQ96S21 AC020891.4-201ENST00000605745 93 ntBASIC0.55□□□□□ -2.32
RAB40CQ96S21 Y_RNA.118-201ENST00000363300 101 ntBASIC0.54□□□□□ -2.32
RAB40CQ96S21 Y_RNA.133-201ENST00000363428 110 ntBASIC0.54□□□□□ -2.32
RAB40CQ96S21 Y_RNA.454-201ENST00000384224 113 ntBASIC0.54□□□□□ -2.32
RAB40CQ96S21 RNU6-493P-201ENST00000391321 108 ntBASIC0.54□□□□□ -2.32
RAB40CQ96S21 MIR548J-201ENST00000408833 112 ntBASIC0.54□□□□□ -2.32
RAB40CQ96S21 RNA5SP261-201ENST00000410536 106 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 232.8 ms