Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
ZNF560Q96MR9 RNU6-1270P-201ENST00000517128 108 ntBASIC0.32□□□□□ -2.36
ZNF560Q96MR9 AC131281.1-201ENST00000522984 164 ntBASIC0.32□□□□□ -2.36
ZNF560Q96MR9 SNORD92-201ENST00000585078 85 ntBASIC0.32□□□□□ -2.36
ZNF560Q96MR9 Y_RNA.24-201ENST00000362508 103 ntBASIC0.31□□□□□ -2.36
ZNF560Q96MR9 Y_RNA.36-201ENST00000362602 112 ntBASIC0.31□□□□□ -2.36
ZNF560Q96MR9 Y_RNA.66-201ENST00000362862 102 ntBASIC0.31□□□□□ -2.36
ZNF560Q96MR9 Y_RNA.152-201ENST00000363578 100 ntBASIC0.31□□□□□ -2.36
ZNF560Q96MR9 Y_RNA.158-201ENST00000363651 101 ntBASIC0.31□□□□□ -2.36
ZNF560Q96MR9 Y_RNA.455-201ENST00000384230 98 ntBASIC0.31□□□□□ -2.36
ZNF560Q96MR9 MIR626-201ENST00000385032 94 ntBASIC0.31□□□□□ -2.36
ZNF560Q96MR9 MT-TF-201ENST00000387314 71 ntBASIC0.31□□□□□ -2.36
ZNF560Q96MR9 MIR1257-201ENST00000408490 117 ntBASIC0.31□□□□□ -2.36
ZNF560Q96MR9 RNU6-1190P-201ENST00000410811 104 ntBASIC0.31□□□□□ -2.36
ZNF560Q96MR9 RNU7-102P-201ENST00000458948 62 ntBASIC0.31□□□□□ -2.36
ZNF560Q96MR9 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
ZNF560Q96MR9 RNA5SP480-201ENST00000516840 109 ntBASIC0.31□□□□□ -2.36
ZNF560Q96MR9 RNU6-1137P-201ENST00000517073 99 ntBASIC0.31□□□□□ -2.36
ZNF560Q96MR9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.31□□□□□ -2.36
ZNF560Q96MR9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.31□□□□□ -2.36
ZNF560Q96MR9 AC134503.1-201ENST00000633048 54 ntBASIC0.31□□□□□ -2.36
ZNF560Q96MR9 RNU6-1309P-201ENST00000363305 108 ntBASIC0.3□□□□□ -2.36
ZNF560Q96MR9 Y_RNA.229-201ENST00000364347 113 ntBASIC0.3□□□□□ -2.36
ZNF560Q96MR9 SNORA22B-201ENST00000383876 138 ntBASIC0.3□□□□□ -2.36
ZNF560Q96MR9 Y_RNA.460-201ENST00000384255 102 ntBASIC0.3□□□□□ -2.36
ZNF560Q96MR9 MIR548I3-201ENST00000408378 149 ntBASIC0.3□□□□□ -2.36
ZNF560Q96MR9 AF228730.3-201ENST00000436691 102 ntBASIC0.3□□□□□ -2.36
ZNF560Q96MR9 RNU2-11P-201ENST00000459191 187 ntBASIC0.3□□□□□ -2.36
ZNF560Q96MR9 AL117351.2-201ENST00000513571 157 ntBASIC0.3□□□□□ -2.36
ZNF560Q96MR9 SERF1AP1-201ENST00000514575 187 ntBASIC0.3□□□□□ -2.36
ZNF560Q96MR9 RNU6-1299P-201ENST00000516316 100 ntBASIC0.3□□□□□ -2.36
ZNF560Q96MR9 RNU7-156P-201ENST00000517214 74 ntBASIC0.3□□□□□ -2.36
ZNF560Q96MR9 AC008608.1-201ENST00000603910 127 ntBASIC0.3□□□□□ -2.36
ZNF560Q96MR9 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.3□□□□□ -2.36
ZNF560Q96MR9 Y_RNA.64-201ENST00000362845 102 ntBASIC0.29□□□□□ -2.36
ZNF560Q96MR9 SNORD114-26-201ENST00000363543 72 ntBASIC0.29□□□□□ -2.36
ZNF560Q96MR9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.29□□□□□ -2.36
ZNF560Q96MR9 RNU6-1189P-201ENST00000383958 107 ntBASIC0.29□□□□□ -2.36
ZNF560Q96MR9 RNU6-211P-201ENST00000384047 107 ntBASIC0.29□□□□□ -2.36
ZNF560Q96MR9 RNY3P5-201ENST00000384127 102 ntBASIC0.29□□□□□ -2.36
ZNF560Q96MR9 Y_RNA.527-201ENST00000384573 102 ntBASIC0.29□□□□□ -2.36
ZNF560Q96MR9 RNU6-679P-201ENST00000391003 106 ntBASIC0.29□□□□□ -2.36
ZNF560Q96MR9 RNU6-651P-201ENST00000411040 105 ntBASIC0.29□□□□□ -2.36
ZNF560Q96MR9 RNA5SP153-201ENST00000516498 76 ntBASIC0.29□□□□□ -2.36
ZNF560Q96MR9 AC113195.1-201ENST00000579952 141 ntBASIC0.29□□□□□ -2.36
ZNF560Q96MR9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.29□□□□□ -2.36
ZNF560Q96MR9 MIR376A2-201ENST00000636782 80 ntBASIC0.29□□□□□ -2.36
ZNF560Q96MR9 MIR30D-201ENST00000362283 70 ntBASIC0.28□□□□□ -2.36
ZNF560Q96MR9 Y_RNA.153-201ENST00000363615 91 ntBASIC0.28□□□□□ -2.36
ZNF560Q96MR9 Y_RNA.210-201ENST00000364161 110 ntBASIC0.28□□□□□ -2.36
ZNF560Q96MR9 RNA5SP517-201ENST00000364724 117 ntBASIC0.28□□□□□ -2.36
ZNF560Q96MR9 Y_RNA.634-201ENST00000364811 113 ntBASIC0.28□□□□□ -2.36
ZNF560Q96MR9 Y_RNA.440-201ENST00000384120 114 ntBASIC0.28□□□□□ -2.36
ZNF560Q96MR9 MIR518A1-201ENST00000385068 85 ntBASIC0.28□□□□□ -2.36
ZNF560Q96MR9 SNORA40.8-201ENST00000411034 126 ntBASIC0.28□□□□□ -2.36
ZNF560Q96MR9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.28□□□□□ -2.36
ZNF560Q96MR9 AC108740.1-201ENST00000498629 225 ntBASIC0.28□□□□□ -2.36
ZNF560Q96MR9 SNORA25.12-201ENST00000516202 82 ntBASIC0.28□□□□□ -2.36
ZNF560Q96MR9 Y_RNA.711-201ENST00000516993 102 ntBASIC0.28□□□□□ -2.36
ZNF560Q96MR9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.28□□□□□ -2.36
ZNF560Q96MR9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.28□□□□□ -2.36
ZNF560Q96MR9 uc_338.16-201ENST00000621804 95 ntBASIC0.28□□□□□ -2.36
ZNF560Q96MR9 Y_RNA.84-201ENST00000363011 104 ntBASIC0.27□□□□□ -2.37
ZNF560Q96MR9 Y_RNA.91-201ENST00000363042 107 ntBASIC0.27□□□□□ -2.37
ZNF560Q96MR9 Y_RNA.117-201ENST00000363294 101 ntBASIC0.27□□□□□ -2.37
ZNF560Q96MR9 RNU6-597P-201ENST00000365620 102 ntBASIC0.27□□□□□ -2.37
ZNF560Q96MR9 RNU6-484P-201ENST00000384016 107 ntBASIC0.27□□□□□ -2.37
ZNF560Q96MR9 MIR193B-201ENST00000384907 83 ntBASIC0.27□□□□□ -2.37
ZNF560Q96MR9 SNORD12C-201ENST00000386307 89 ntBASIC0.27□□□□□ -2.37
ZNF560Q96MR9 RNU2-70P-201ENST00000410718 179 ntBASIC0.27□□□□□ -2.37
ZNF560Q96MR9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.27□□□□□ -2.37
ZNF560Q96MR9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.27□□□□□ -2.37
ZNF560Q96MR9 AL138752.1-201ENST00000452964 351 ntBASIC0.27□□□□□ -2.37
ZNF560Q96MR9 RNA5SP94-201ENST00000516917 108 ntBASIC0.27□□□□□ -2.37
ZNF560Q96MR9 MIR4680-201ENST00000580906 66 ntBASIC0.27□□□□□ -2.37
ZNF560Q96MR9 SNORD44.1-201ENST00000363202 61 ntBASIC0.26□□□□□ -2.37
ZNF560Q96MR9 Y_RNA.275-201ENST00000364726 110 ntBASIC0.26□□□□□ -2.37
ZNF560Q96MR9 Y_RNA.512-201ENST00000384518 102 ntBASIC0.26□□□□□ -2.37
ZNF560Q96MR9 Y_RNA.535-201ENST00000384612 99 ntBASIC0.26□□□□□ -2.37
ZNF560Q96MR9 RNA5SP261-201ENST00000410536 106 ntBASIC0.26□□□□□ -2.37
ZNF560Q96MR9 SNORD71-201ENST00000411292 86 ntBASIC0.26□□□□□ -2.37
ZNF560Q96MR9 RNU6-448P-201ENST00000517052 107 ntBASIC0.26□□□□□ -2.37
ZNF560Q96MR9 AC020661.2-201ENST00000560114 134 ntBASIC0.26□□□□□ -2.37
ZNF560Q96MR9 AC097639.2-201ENST00000603159 172 ntBASIC0.26□□□□□ -2.37
ZNF560Q96MR9 Y_RNA.7-201ENST00000362352 102 ntBASIC0.25□□□□□ -2.37
ZNF560Q96MR9 RNA5SP117-201ENST00000365294 118 ntBASIC0.25□□□□□ -2.37
ZNF560Q96MR9 Y_RNA.432-201ENST00000384087 111 ntBASIC0.25□□□□□ -2.37
ZNF560Q96MR9 RNU6-1289P-201ENST00000384431 106 ntBASIC0.25□□□□□ -2.37
ZNF560Q96MR9 MT-TT-201ENST00000387460 66 ntBASIC0.25□□□□□ -2.37
ZNF560Q96MR9 RNU6-1228P-201ENST00000391014 107 ntBASIC0.25□□□□□ -2.37
ZNF560Q96MR9 RNU7-45P-201ENST00000459460 63 ntBASIC0.25□□□□□ -2.37
ZNF560Q96MR9 RNU6-1338P-201ENST00000516328 91 ntBASIC0.25□□□□□ -2.37
ZNF560Q96MR9 AC022523.2-201ENST00000561045 150 ntBASIC0.25□□□□□ -2.37
ZNF560Q96MR9 MIR6717-201ENST00000622747 73 ntBASIC0.25□□□□□ -2.37
ZNF560Q96MR9 snoU2_19.4-201ENST00000364329 80 ntBASIC0.24□□□□□ -2.37
ZNF560Q96MR9 SNORA26.6-201ENST00000391256 115 ntBASIC0.24□□□□□ -2.37
ZNF560Q96MR9 MIR548P-201ENST00000408336 84 ntBASIC0.24□□□□□ -2.37
ZNF560Q96MR9 AC113618.1-201ENST00000416747 285 ntBASIC0.24□□□□□ -2.37
ZNF560Q96MR9 MTND4LP11-201ENST00000422184 280 ntBASIC0.24□□□□□ -2.37
ZNF560Q96MR9 SNRPGP8-201ENST00000454064 226 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms